Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30593
         (728 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    27   0.59 
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   1.8  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   2.4  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 27.1 bits (57), Expect = 0.59
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +3

Query: 48  RHSTRSTCPTSWHSVRSTSTP 110
           R  +RST PTSW   R TS P
Sbjct: 277 RRRSRSTRPTSWPRSRPTSKP 297


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
 Frame = +1

Query: 175 PDGPARGERCY--RRKRDNL*GLRRYFGSGRHTERSRRAGHQKR 300
           PD P   +  Y  RR R     ++R   +GR  +  RR  H+ +
Sbjct: 532 PDSPRLSDAQYGFRRGRSTFSAIQRVVDAGRRAKSFRRTNHRDK 575


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +2

Query: 200  AVIEENEIIYRDYVDISVAVATPKGLVVPVIRNVQNMTYADIELTIAG 343
            A +EE  +++RD    +V V TP  + + V    + + +   E   AG
Sbjct: 948  AYLEERRLVHRDLAARNVLVQTPSCVKITVFGLAKLLDFDSDEYRAAG 995


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,248
Number of Sequences: 2352
Number of extensions: 15248
Number of successful extensions: 41
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)