Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30593
(728 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical ... 325 2e-89
Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 128 3e-30
Z81044-2|CAB02813.1| 337|Caenorhabditis elegans Hypothetical pr... 113 9e-26
Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical pr... 102 2e-22
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z82073-5|CAB63322.1| 333|Caenorhabditis elegans Hypothetical pr... 30 1.5
U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical pr... 30 1.5
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 29 4.5
AL110479-2|CAB54350.2| 438|Caenorhabditis elegans Hypothetical ... 28 5.9
U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical pr... 28 7.9
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 28 7.9
>AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical
protein W02F12.5 protein.
Length = 463
Score = 325 bits (798), Expect = 2e-89
Identities = 154/218 (70%), Positives = 181/218 (83%)
Frame = +2
Query: 2 IAQRLKDAQNTNAMLTTFNEIDMSHIMAFRKKHLDTFTKKHSIKLGLMSPFVKAAANALM 181
IAQRLKDAQNT AMLTTFNEIDMS ++ RK + F KH +KLG+MSPFV+AAA AL
Sbjct: 246 IAQRLKDAQNTYAMLTTFNEIDMSSLIEMRKTYQKDFVAKHGVKLGMMSPFVRAAAYALQ 305
Query: 182 DQPVVNAVIEENEIIYRDYVDISVAVATPKGLVVPVIRNVQNMTYADIELTIAGLAEKAR 361
+ PVVNAV++ENEI+YR +VDISVAVATPKGLVVPV+RNV++M YA IEL +A L KAR
Sbjct: 306 ESPVVNAVLDENEIVYRHFVDISVAVATPKGLVVPVLRNVESMNYAQIELELANLGVKAR 365
Query: 362 TGKLTIEEMDGGTFTISNGGVFGSLMGTPIINPPQSAILGMHGIFERPIALNGQVVIRPM 541
GKL +E+M+GGTFTISNGGVFGS+ GTPIINPPQSAILGMHG+F+R + +NG+ IRP+
Sbjct: 366 DGKLAVEDMEGGTFTISNGGVFGSMFGTPIINPPQSAILGMHGVFDRVVPVNGKPEIRPI 425
Query: 542 MYIALTYDHRLIDGREAVLFLRKIKEGVEDPATIVAGL 655
M IALTYDHRLIDGREAV FL+KIK VEDP + L
Sbjct: 426 MQIALTYDHRLIDGREAVTFLKKIKTAVEDPRIMFMNL 463
>Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical
protein F23B12.5 protein.
Length = 507
Score = 128 bits (310), Expect = 3e-30
Identities = 82/221 (37%), Positives = 122/221 (55%), Gaps = 6/221 (2%)
Frame = +2
Query: 2 IAQRLKDAQNTNAMLTTFNEIDMSHIMAFRKKH---LDTFTKKHSIKLGLMSPFVKAAAN 172
IA+RL ++++T +EI + ++ R+K L T + K+ + +KA+A
Sbjct: 287 IAKRLTESKSTIPHYYLTSEIQLDTLLQVREKLNGLLAKGTSGQATKISINDFIIKASAL 346
Query: 173 ALMDQPVVNAVIEENEIIYRDYVDISVAVATPKGLVVPVIRNVQNMTYADIELTIAGLAE 352
A P N+ ++ I +VD+SVAV+TP GL+ P+I N A I I LA+
Sbjct: 347 ACQRVPEANSYWMDSFIRENHHVDVSVAVSTPAGLITPIIFNAHAKGLATIASEIVELAQ 406
Query: 353 KARTGKLTIEEMDGGTFTISNGGVFGSLMG-TPIINPPQSAILGMHGIFER--PIALNGQ 523
+AR GKL E GGTFT+SN G+FGS+ T IINPPQS IL + G ++ P G
Sbjct: 407 RAREGKLQPHEFQGGTFTVSNLGMFGSVSDFTAIINPPQSCILAIGGASDKLVPDEAEGY 466
Query: 524 VVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGVEDPATIV 646
I+ M + L+ DHR +DG ++LR KE +E P T++
Sbjct: 467 KKIKTMK-VTLSCDHRTVDGAVGAVWLRHFKEFLEKPHTML 506
>Z81044-2|CAB02813.1| 337|Caenorhabditis elegans Hypothetical
protein C30H6.7 protein.
Length = 337
Score = 113 bits (273), Expect = 9e-26
Identities = 75/198 (37%), Positives = 106/198 (53%), Gaps = 1/198 (0%)
Frame = +2
Query: 59 EIDMSHIMAFRKKHLDTFTKKHSIKLGLMSPFVKAAANALMDQPVVNAVIEENEIIYRDY 238
++ + I+A R+K KK + L +KAAA AL P VN V E I
Sbjct: 131 DVRIDDILALRQK-----LKKSGTAVSLNDFIIKAAALALRSVPTVN-VRWTPEGIGLGS 184
Query: 239 VDISVAVATPKGLVVPVIRNVQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNG 418
VDISVAVATP GL+ P++ N + I + L+ AR KL ++ GG+FTISN
Sbjct: 185 VDISVAVATPTGLITPIVENSDILGVLAISSKVKELSGLARESKLKPQQFQGGSFTISNL 244
Query: 419 GVFGSLMG-TPIINPPQSAILGMHGIFERPIALNGQVVIRPMMYIALTYDHRLIDGREAV 595
G+FGS+ T IINPPQ AIL + G ++++GQ+ + +M + L +D R I A
Sbjct: 245 GMFGSVTNFTAIINPPQCAILTIGGTRSEVVSVDGQLETQKLMGVNLCFDGRAISEECAK 304
Query: 596 LFLRKIKEGVEDPATIVA 649
FL E + DP ++A
Sbjct: 305 RFLLHFSESLSDPELLIA 322
>Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical
protein ZK669.4 protein.
Length = 448
Score = 102 bits (245), Expect = 2e-22
Identities = 63/203 (31%), Positives = 113/203 (55%), Gaps = 3/203 (1%)
Frame = +2
Query: 56 NEIDMSHIMAFRKKHLDTFTKKHSIKLGLMSPFVKAAANALMDQPVVNAVIEEN--EIIY 229
+EI++ ++ +R + L F K+ IKL M F+KAA+ AL++ P +N+ +E +I+
Sbjct: 246 DEINVDSLVKYRAE-LKEFAKERHIKLSYMPFFIKAASLALLEYPSLNSTTDEKMENVIH 304
Query: 230 RDYVDISVAVATPKGLVVPVIRNVQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTI 409
+ +I +A+ TP GLVVP I+N + + +I + L E + ++ E++ GTF++
Sbjct: 305 KASHNICLAMDTPGGLVVPNIKNCEQRSIFEIAQELNRLLEAGKKQQIKREDLIDGTFSL 364
Query: 410 SNGGVFGSLMGTPIINPPQSAILGMHGIFERP-IALNGQVVIRPMMYIALTYDHRLIDGR 586
SN G G +P++ PPQ AI + I + P + V+ +M ++ DHR++DG
Sbjct: 365 SNIGNIGGTYASPVVFPPQVAIGAIGKIEKLPRFDKHDNVIPVNIMKVSWCADHRVVDGA 424
Query: 587 EAVLFLRKIKEGVEDPATIVAGL 655
F + K +E P+ ++A L
Sbjct: 425 TMARFSNRWKFYLEHPSAMLAQL 447
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 31.9 bits (69), Expect = 0.48
Identities = 28/109 (25%), Positives = 40/109 (36%), Gaps = 3/109 (2%)
Frame = +1
Query: 211 RKRDNL*GLRRYFGSGRHTERSR---RAGHQKRSEHDLC*YRAHHSWASGKSENR*AHDR 381
++ D G RR+ G+H +R R H R H +H+ + N +
Sbjct: 884 QQNDGYRGDRRHRSPGKHIAPARAHNRGQHHNRGHHHGP--PRNHNQDRNRHRNHDGNRH 941
Query: 382 RNGRRNVHHQQWRRFRVSDGNANHQSASICYTGYARHLRAAHRSERPSR 528
+N R+ HH Q R R + HQS AH RP R
Sbjct: 942 QNQDRSRHHNQDRNRRQNHDRNRHQSQGRNRQQDHERGDEAHEEARPDR 990
>Z82073-5|CAB63322.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.7 protein.
Length = 333
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 23 AQNTNAMLTTF-NEI-DMSHIMAFRKKHLDTFTKKHSIKLGLMSPFVKAAANALMDQPVV 196
A +T++ L F N + ++ +++ K L TF++ + LM PF+ + DQP V
Sbjct: 103 ALSTSSCLLLFCNSVFNIFNMLRNNKSWLRTFSEWLAWTFVLMFPFMSLLGFTIRDQPNV 162
Query: 197 NAVIEENEIIYRDYVD 244
A+ ++ Y D +D
Sbjct: 163 KALTKQISSYYPDCID 178
>U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical
protein R04E5.8b protein.
Length = 142
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Frame = +1
Query: 211 RKRDNL*GLRRYFGSGRHTERSR---RAGHQKRSEHDLC*YRAHHSWASGKSENR*AHDR 381
++ D G RR+ G+H +R R H R H +H+ + N +
Sbjct: 40 QQNDGYRGDRRHRSPGKHIAPARAHNRGQHHNRGHHHGP--PRNHNQDRNRHRNHDGNRH 97
Query: 382 RNGRRNVHHQQWRRFRVSDGNANHQS 459
+N R+ HH Q R R + HQS
Sbjct: 98 QNQDRSRHHNQDRNRRQNHDRNRHQS 123
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -2
Query: 535 PDHDLAVQSDGPLEDAVHTQYSRLRRIDDWRSHQRPENAAIADGERSAVHF 383
P + +Q+DGP E+ V Y +L + S PE + +G R + F
Sbjct: 10 PQLEEFLQNDGPTEEEVRVWYDKLAEYEIEGSESPPEIELLYNGARYLMGF 60
>AL110479-2|CAB54350.2| 438|Caenorhabditis elegans Hypothetical
protein Y105C5B.3 protein.
Length = 438
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -2
Query: 331 ELDISISHVLNVSDDRHDETFRCGDRYRNI---YVVPINYLVFFDN 203
+LD+ I H+ +++ D HDE GD Y N + + Y+VF N
Sbjct: 151 QLDVII-HIGDLAYDLHDENGATGDDYMNAIEPFAAYVPYMVFAGN 195
>U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical
protein T19D7.1 protein.
Length = 497
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = -3
Query: 591 ASRPSISLWS*VRAIYIMG----LITTWPFRAMGRSKMPC 484
AS +IS+W IY++G LI F +MGRSK C
Sbjct: 429 ASLNAISIWQLFTYIYVIGIVIELIIITLFASMGRSKTCC 468
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 284 PVIRNVQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSL 436
P+ +V N+ + + G+A + + + E G TF+++ G + SL
Sbjct: 496 PITSSVTNLNKSGLRAPATGIANDVESARKLMREKLGPTFSLNKGDISFSL 546
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,565,586
Number of Sequences: 27780
Number of extensions: 356632
Number of successful extensions: 1019
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -