BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30593 (728 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical ... 325 2e-89 Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 128 3e-30 Z81044-2|CAB02813.1| 337|Caenorhabditis elegans Hypothetical pr... 113 9e-26 Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical pr... 102 2e-22 U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.48 Z82073-5|CAB63322.1| 333|Caenorhabditis elegans Hypothetical pr... 30 1.5 U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical pr... 30 1.5 AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 29 4.5 AL110479-2|CAB54350.2| 438|Caenorhabditis elegans Hypothetical ... 28 5.9 U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical pr... 28 7.9 U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 28 7.9 >AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical protein W02F12.5 protein. Length = 463 Score = 325 bits (798), Expect = 2e-89 Identities = 154/218 (70%), Positives = 181/218 (83%) Frame = +2 Query: 2 IAQRLKDAQNTNAMLTTFNEIDMSHIMAFRKKHLDTFTKKHSIKLGLMSPFVKAAANALM 181 IAQRLKDAQNT AMLTTFNEIDMS ++ RK + F KH +KLG+MSPFV+AAA AL Sbjct: 246 IAQRLKDAQNTYAMLTTFNEIDMSSLIEMRKTYQKDFVAKHGVKLGMMSPFVRAAAYALQ 305 Query: 182 DQPVVNAVIEENEIIYRDYVDISVAVATPKGLVVPVIRNVQNMTYADIELTIAGLAEKAR 361 + PVVNAV++ENEI+YR +VDISVAVATPKGLVVPV+RNV++M YA IEL +A L KAR Sbjct: 306 ESPVVNAVLDENEIVYRHFVDISVAVATPKGLVVPVLRNVESMNYAQIELELANLGVKAR 365 Query: 362 TGKLTIEEMDGGTFTISNGGVFGSLMGTPIINPPQSAILGMHGIFERPIALNGQVVIRPM 541 GKL +E+M+GGTFTISNGGVFGS+ GTPIINPPQSAILGMHG+F+R + +NG+ IRP+ Sbjct: 366 DGKLAVEDMEGGTFTISNGGVFGSMFGTPIINPPQSAILGMHGVFDRVVPVNGKPEIRPI 425 Query: 542 MYIALTYDHRLIDGREAVLFLRKIKEGVEDPATIVAGL 655 M IALTYDHRLIDGREAV FL+KIK VEDP + L Sbjct: 426 MQIALTYDHRLIDGREAVTFLKKIKTAVEDPRIMFMNL 463 >Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical protein F23B12.5 protein. Length = 507 Score = 128 bits (310), Expect = 3e-30 Identities = 82/221 (37%), Positives = 122/221 (55%), Gaps = 6/221 (2%) Frame = +2 Query: 2 IAQRLKDAQNTNAMLTTFNEIDMSHIMAFRKKH---LDTFTKKHSIKLGLMSPFVKAAAN 172 IA+RL ++++T +EI + ++ R+K L T + K+ + +KA+A Sbjct: 287 IAKRLTESKSTIPHYYLTSEIQLDTLLQVREKLNGLLAKGTSGQATKISINDFIIKASAL 346 Query: 173 ALMDQPVVNAVIEENEIIYRDYVDISVAVATPKGLVVPVIRNVQNMTYADIELTIAGLAE 352 A P N+ ++ I +VD+SVAV+TP GL+ P+I N A I I LA+ Sbjct: 347 ACQRVPEANSYWMDSFIRENHHVDVSVAVSTPAGLITPIIFNAHAKGLATIASEIVELAQ 406 Query: 353 KARTGKLTIEEMDGGTFTISNGGVFGSLMG-TPIINPPQSAILGMHGIFER--PIALNGQ 523 +AR GKL E GGTFT+SN G+FGS+ T IINPPQS IL + G ++ P G Sbjct: 407 RAREGKLQPHEFQGGTFTVSNLGMFGSVSDFTAIINPPQSCILAIGGASDKLVPDEAEGY 466 Query: 524 VVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGVEDPATIV 646 I+ M + L+ DHR +DG ++LR KE +E P T++ Sbjct: 467 KKIKTMK-VTLSCDHRTVDGAVGAVWLRHFKEFLEKPHTML 506 >Z81044-2|CAB02813.1| 337|Caenorhabditis elegans Hypothetical protein C30H6.7 protein. Length = 337 Score = 113 bits (273), Expect = 9e-26 Identities = 75/198 (37%), Positives = 106/198 (53%), Gaps = 1/198 (0%) Frame = +2 Query: 59 EIDMSHIMAFRKKHLDTFTKKHSIKLGLMSPFVKAAANALMDQPVVNAVIEENEIIYRDY 238 ++ + I+A R+K KK + L +KAAA AL P VN V E I Sbjct: 131 DVRIDDILALRQK-----LKKSGTAVSLNDFIIKAAALALRSVPTVN-VRWTPEGIGLGS 184 Query: 239 VDISVAVATPKGLVVPVIRNVQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNG 418 VDISVAVATP GL+ P++ N + I + L+ AR KL ++ GG+FTISN Sbjct: 185 VDISVAVATPTGLITPIVENSDILGVLAISSKVKELSGLARESKLKPQQFQGGSFTISNL 244 Query: 419 GVFGSLMG-TPIINPPQSAILGMHGIFERPIALNGQVVIRPMMYIALTYDHRLIDGREAV 595 G+FGS+ T IINPPQ AIL + G ++++GQ+ + +M + L +D R I A Sbjct: 245 GMFGSVTNFTAIINPPQCAILTIGGTRSEVVSVDGQLETQKLMGVNLCFDGRAISEECAK 304 Query: 596 LFLRKIKEGVEDPATIVA 649 FL E + DP ++A Sbjct: 305 RFLLHFSESLSDPELLIA 322 >Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical protein ZK669.4 protein. Length = 448 Score = 102 bits (245), Expect = 2e-22 Identities = 63/203 (31%), Positives = 113/203 (55%), Gaps = 3/203 (1%) Frame = +2 Query: 56 NEIDMSHIMAFRKKHLDTFTKKHSIKLGLMSPFVKAAANALMDQPVVNAVIEEN--EIIY 229 +EI++ ++ +R + L F K+ IKL M F+KAA+ AL++ P +N+ +E +I+ Sbjct: 246 DEINVDSLVKYRAE-LKEFAKERHIKLSYMPFFIKAASLALLEYPSLNSTTDEKMENVIH 304 Query: 230 RDYVDISVAVATPKGLVVPVIRNVQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTI 409 + +I +A+ TP GLVVP I+N + + +I + L E + ++ E++ GTF++ Sbjct: 305 KASHNICLAMDTPGGLVVPNIKNCEQRSIFEIAQELNRLLEAGKKQQIKREDLIDGTFSL 364 Query: 410 SNGGVFGSLMGTPIINPPQSAILGMHGIFERP-IALNGQVVIRPMMYIALTYDHRLIDGR 586 SN G G +P++ PPQ AI + I + P + V+ +M ++ DHR++DG Sbjct: 365 SNIGNIGGTYASPVVFPPQVAIGAIGKIEKLPRFDKHDNVIPVNIMKVSWCADHRVVDGA 424 Query: 587 EAVLFLRKIKEGVEDPATIVAGL 655 F + K +E P+ ++A L Sbjct: 425 TMARFSNRWKFYLEHPSAMLAQL 447 >U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein R04E5.8a protein. Length = 997 Score = 31.9 bits (69), Expect = 0.48 Identities = 28/109 (25%), Positives = 40/109 (36%), Gaps = 3/109 (2%) Frame = +1 Query: 211 RKRDNL*GLRRYFGSGRHTERSR---RAGHQKRSEHDLC*YRAHHSWASGKSENR*AHDR 381 ++ D G RR+ G+H +R R H R H +H+ + N + Sbjct: 884 QQNDGYRGDRRHRSPGKHIAPARAHNRGQHHNRGHHHGP--PRNHNQDRNRHRNHDGNRH 941 Query: 382 RNGRRNVHHQQWRRFRVSDGNANHQSASICYTGYARHLRAAHRSERPSR 528 +N R+ HH Q R R + HQS AH RP R Sbjct: 942 QNQDRSRHHNQDRNRRQNHDRNRHQSQGRNRQQDHERGDEAHEEARPDR 990 >Z82073-5|CAB63322.1| 333|Caenorhabditis elegans Hypothetical protein W06D12.7 protein. Length = 333 Score = 30.3 bits (65), Expect = 1.5 Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%) Frame = +2 Query: 23 AQNTNAMLTTF-NEI-DMSHIMAFRKKHLDTFTKKHSIKLGLMSPFVKAAANALMDQPVV 196 A +T++ L F N + ++ +++ K L TF++ + LM PF+ + DQP V Sbjct: 103 ALSTSSCLLLFCNSVFNIFNMLRNNKSWLRTFSEWLAWTFVLMFPFMSLLGFTIRDQPNV 162 Query: 197 NAVIEENEIIYRDYVD 244 A+ ++ Y D +D Sbjct: 163 KALTKQISSYYPDCID 178 >U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical protein R04E5.8b protein. Length = 142 Score = 30.3 bits (65), Expect = 1.5 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 3/86 (3%) Frame = +1 Query: 211 RKRDNL*GLRRYFGSGRHTERSR---RAGHQKRSEHDLC*YRAHHSWASGKSENR*AHDR 381 ++ D G RR+ G+H +R R H R H +H+ + N + Sbjct: 40 QQNDGYRGDRRHRSPGKHIAPARAHNRGQHHNRGHHHGP--PRNHNQDRNRHRNHDGNRH 97 Query: 382 RNGRRNVHHQQWRRFRVSDGNANHQS 459 +N R+ HH Q R R + HQS Sbjct: 98 QNQDRSRHHNQDRNRRQNHDRNRHQS 123 >AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical protein Y47G6A.17 protein. Length = 1736 Score = 28.7 bits (61), Expect = 4.5 Identities = 15/51 (29%), Positives = 24/51 (47%) Frame = -2 Query: 535 PDHDLAVQSDGPLEDAVHTQYSRLRRIDDWRSHQRPENAAIADGERSAVHF 383 P + +Q+DGP E+ V Y +L + S PE + +G R + F Sbjct: 10 PQLEEFLQNDGPTEEEVRVWYDKLAEYEIEGSESPPEIELLYNGARYLMGF 60 >AL110479-2|CAB54350.2| 438|Caenorhabditis elegans Hypothetical protein Y105C5B.3 protein. Length = 438 Score = 28.3 bits (60), Expect = 5.9 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%) Frame = -2 Query: 331 ELDISISHVLNVSDDRHDETFRCGDRYRNI---YVVPINYLVFFDN 203 +LD+ I H+ +++ D HDE GD Y N + + Y+VF N Sbjct: 151 QLDVII-HIGDLAYDLHDENGATGDDYMNAIEPFAAYVPYMVFAGN 195 >U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical protein T19D7.1 protein. Length = 497 Score = 27.9 bits (59), Expect = 7.9 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%) Frame = -3 Query: 591 ASRPSISLWS*VRAIYIMG----LITTWPFRAMGRSKMPC 484 AS +IS+W IY++G LI F +MGRSK C Sbjct: 429 ASLNAISIWQLFTYIYVIGIVIELIIITLFASMGRSKTCC 468 >U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical protein C14F11.2 protein. Length = 638 Score = 27.9 bits (59), Expect = 7.9 Identities = 12/51 (23%), Positives = 25/51 (49%) Frame = +2 Query: 284 PVIRNVQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSL 436 P+ +V N+ + + G+A + + + E G TF+++ G + SL Sbjct: 496 PITSSVTNLNKSGLRAPATGIANDVESARKLMREKLGPTFSLNKGDISFSL 546 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,565,586 Number of Sequences: 27780 Number of extensions: 356632 Number of successful extensions: 1019 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 943 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1010 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1718929214 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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