Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30588
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35595-2|CAA84642.1| 285|Caenorhabditis elegans Hypothetical pr... 58 5e-09
Z35595-1|CAA84633.1| 290|Caenorhabditis elegans Hypothetical pr... 58 5e-09
Z73905-1|CAA98110.1| 244|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U40415-8|AAP68935.1| 294|Caenorhabditis elegans Aquaporin or aq... 52 5e-07
U41548-1|AAA83205.2| 291|Caenorhabditis elegans Aquaporin or aq... 50 2e-06
U40415-7|AAP68934.1| 258|Caenorhabditis elegans Aquaporin or aq... 49 3e-06
U20864-5|AAN65321.1| 295|Caenorhabditis elegans Aquaporin or aq... 46 2e-05
U20864-4|AAC46664.2| 304|Caenorhabditis elegans Aquaporin or aq... 46 2e-05
Z70754-10|CAA94779.2| 273|Caenorhabditis elegans Hypothetical p... 46 4e-05
Z70753-13|CAA94770.2| 273|Caenorhabditis elegans Hypothetical p... 46 4e-05
AL034365-7|CAA22259.1| 421|Caenorhabditis elegans Hypothetical ... 45 5e-05
Z71185-1|CAA94903.1| 290|Caenorhabditis elegans Hypothetical pr... 38 0.007
AL117195-27|CAE18006.1| 243|Caenorhabditis elegans Hypothetical... 35 0.050
Z83111-4|CAB05535.2| 498|Caenorhabditis elegans Hypothetical pr... 30 1.9
AC006769-15|AAF60587.1| 337|Caenorhabditis elegans Serpentine r... 30 1.9
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 29 2.5
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 29 2.5
J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein. 29 2.5
AF022980-14|AAG24190.1| 332|Caenorhabditis elegans Serpentine r... 29 3.3
Z66564-6|CAA91473.4| 737|Caenorhabditis elegans Hypothetical pr... 28 5.7
AY887904-1|AAX34416.1| 737|Caenorhabditis elegans anion transpo... 28 5.7
AL032630-9|CAA21565.1| 369|Caenorhabditis elegans Hypothetical ... 28 7.5
AF016436-4|AAC25895.2| 331|Caenorhabditis elegans Serpentine re... 28 7.5
Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical pr... 27 9.9
U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical pr... 27 9.9
U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF045644-2|AAC02600.1| 454|Caenorhabditis elegans Hypothetical ... 27 9.9
>Z35595-2|CAA84642.1| 285|Caenorhabditis elegans Hypothetical
protein C01G6.1b protein.
Length = 285
Score = 58.4 bits (135), Expect = 5e-09
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Frame = +3
Query: 246 RQIVSEFISTLLLLVFGCMACIPHAGYLPQPPI---YGA-LGFGLVVSFNVQIFGHISGA 413
R +++EF T LL + G LP+P + G +GFG+ + F V + +SG
Sbjct: 18 RAVLAEFTGTYLLCLIGLSVVAQKV--LPRPEVNEFIGVNVGFGIAIVFGVAVSAKLSGG 75
Query: 414 HMNPSVTLASLIWGAISFPLAIAFIVAQCAGAILGYGLLIAV 539
H+NP+V+ A L G I+ IA+ VAQ GA G + AV
Sbjct: 76 HINPAVSFAFLSVGQITIVQFIAYFVAQFFGAFFGAATVYAV 117
>Z35595-1|CAA84633.1| 290|Caenorhabditis elegans Hypothetical
protein C01G6.1a protein.
Length = 290
Score = 58.4 bits (135), Expect = 5e-09
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Frame = +3
Query: 246 RQIVSEFISTLLLLVFGCMACIPHAGYLPQPPI---YGA-LGFGLVVSFNVQIFGHISGA 413
R +++EF T LL + G LP+P + G +GFG+ + F V + +SG
Sbjct: 18 RAVLAEFTGTYLLCLIGLSVVAQKV--LPRPEVNEFIGVNVGFGIAIVFGVAVSAKLSGG 75
Query: 414 HMNPSVTLASLIWGAISFPLAIAFIVAQCAGAILGYGLLIAV 539
H+NP+V+ A L G I+ IA+ VAQ GA G + AV
Sbjct: 76 HINPAVSFAFLSVGQITIVQFIAYFVAQFFGAFFGAATVYAV 117
>Z73905-1|CAA98110.1| 244|Caenorhabditis elegans Hypothetical
protein C32C4.2 protein.
Length = 244
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Frame = +3
Query: 243 WRQIVSEFISTLLLLVFGCMACIPHAG-YLPQPPIYGALGFGLVVSFNVQIFGHISGAHM 419
+ + +EFI+ LL + G M AG +L ++ A G+ + FG +SGAH+
Sbjct: 11 YSKCAAEFIAVLLFVYIGSMQA---AGVFLHDGVLHAAFAHGVAIFVLAATFGGVSGAHI 67
Query: 420 NPSVTLASLIWGAISFPLAIAFIVAQCAGAILGYGLLIAVS 542
NP+VT + G IS A+ ++V+Q G++ G LL+ +S
Sbjct: 68 NPAVTFGIALVGRISPIHAVCYVVSQLLGSVFG-ALLVRIS 107
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +3
Query: 237 YEWRQIVSEFISTLLLLVFGCMACIPHAGYLPQPPIYGALGFGLVVSFNVQIFGHISGAH 416
Y W++ ++ I T +LV + C P+ A+GF L++ + G ISGA
Sbjct: 127 YNWQEGLTAEIVTTYILVQTVLLCAVDTDKNRLAPL--AIGFSLIIE--ILAAGAISGAS 182
Query: 417 MNPSVTLASLIWGAI 461
MNP+ + I G +
Sbjct: 183 MNPARSFGPNIMGQV 197
>U40415-8|AAP68935.1| 294|Caenorhabditis elegans Aquaporin or
aquaglyceroporin relatedprotein 8, isoform b protein.
Length = 294
Score = 51.6 bits (118), Expect = 5e-07
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Frame = +3
Query: 246 RQIVSEFISTLLLLVFGCMACIPHAGYLPQPPIYGALGFGLVVSFNVQIFGHISGAHMNP 425
R++++E I T LL+ G A I A + + +G+ F V + +SG H+NP
Sbjct: 21 RELLAECIGTFFLLLIGNAANIQAAVAVGGNSTSCHIAWGIGFMFAVYLAASVSGGHLNP 80
Query: 426 SVTLASLIWGAISFPLAIAFIVAQCAGAILGYGLLIAVSHIDM----------------D 557
++++A I G + I + +AQ GA LG + H D+
Sbjct: 81 AISVAQSILGNLPPWKIIPYAIAQVIGAFLGAAVAYFGHHDDLWKLDGGIRQVTGGQATA 140
Query: 558 GVCMTLPRTEITLFQALIVEAVLTAALSFLNCACWDPVNKNKQDSVPV 701
G+ T P ++++ +L+ + + TA LS L C D ++ VPV
Sbjct: 141 GLFTTFPPDHMSVWGSLLDQIIGTAMLSGLVCLITDKRHQIPTGVVPV 188
>U41548-1|AAA83205.2| 291|Caenorhabditis elegans Aquaporin or
aquaglyceroporin relatedprotein 7 protein.
Length = 291
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +3
Query: 246 RQIVSEFISTLLLLVFGCMACIPH--AGYLPQPPIYGALGFGLVVSFNVQIFGHISGAHM 419
R +SEF T LLL G + + I LG+GL ++F V SG H
Sbjct: 23 RNALSEFFGTFLLLFIGIGIVMQFILSNEKLNTWININLGWGLAIAFTVYTCSKTSGGHF 82
Query: 420 NPSVTLASLIWGAISFPLAIAFIVAQCAGAILG 518
NP+V++A L G + F + + V Q GA LG
Sbjct: 83 NPAVSIAFLTLGKLPFKDFLVYCVVQTIGAALG 115
>U40415-7|AAP68934.1| 258|Caenorhabditis elegans Aquaporin or
aquaglyceroporin relatedprotein 8, isoform a protein.
Length = 258
Score = 49.2 bits (112), Expect = 3e-06
Identities = 30/103 (29%), Positives = 51/103 (49%)
Frame = +3
Query: 246 RQIVSEFISTLLLLVFGCMACIPHAGYLPQPPIYGALGFGLVVSFNVQIFGHISGAHMNP 425
R++++E I T LL+ G A I A + + +G+ F V + +SG H+NP
Sbjct: 21 RELLAECIGTFFLLLIGNAANIQAAVAVGGNSTSCHIAWGIGFMFAVYLAASVSGGHLNP 80
Query: 426 SVTLASLIWGAISFPLAIAFIVAQCAGAILGYGLLIAVSHIDM 554
++++A I G + I + +AQ GA LG + H D+
Sbjct: 81 AISVAQSILGNLPPWKIIPYAIAQVIGAFLGAAVAYFGHHDDL 123
>U20864-5|AAN65321.1| 295|Caenorhabditis elegans Aquaporin or
aquaglyceroporin relatedprotein 1, isoform b protein.
Length = 295
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = +3
Query: 246 RQIVSEFISTLLLLVFGCMACIP-HAGYLPQPPIYGA-LGFGLVVSFNVQIFGHISGAHM 419
R +++EF T LL G HAG G +G+G + F V +SG H+
Sbjct: 24 RNLIAEFFGTFLLCFIGLSIVFQFHAGGGKTTEWIGVNIGWGFAIMFAVMATARMSGGHL 83
Query: 420 NPSVTLASLIWGAISFPLAIAFIVAQCAGAIL 515
NP+V+L G + + +AQ AGA +
Sbjct: 84 NPAVSLLLWSLGHLKLAWVPLYAIAQTAGAFV 115
>U20864-4|AAC46664.2| 304|Caenorhabditis elegans Aquaporin or
aquaglyceroporin relatedprotein 1, isoform a protein.
Length = 304
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = +3
Query: 246 RQIVSEFISTLLLLVFGCMACIP-HAGYLPQPPIYGA-LGFGLVVSFNVQIFGHISGAHM 419
R +++EF T LL G HAG G +G+G + F V +SG H+
Sbjct: 33 RNLIAEFFGTFLLCFIGLSIVFQFHAGGGKTTEWIGVNIGWGFAIMFAVMATARMSGGHL 92
Query: 420 NPSVTLASLIWGAISFPLAIAFIVAQCAGAIL 515
NP+V+L G + + +AQ AGA +
Sbjct: 93 NPAVSLLLWSLGHLKLAWVPLYAIAQTAGAFV 124
>Z70754-10|CAA94779.2| 273|Caenorhabditis elegans Hypothetical
protein F40F9.9 protein.
Length = 273
Score = 45.6 bits (103), Expect = 4e-05
Identities = 41/130 (31%), Positives = 56/130 (43%), Gaps = 5/130 (3%)
Frame = +3
Query: 255 VSEFISTLLLLVFGCMACIPHAGYLPQPPIYGALGFGLVVSFNVQIFGHISGAHMNPSVT 434
V+EF+ L + G M ++ A G + V FGHISG H NP+V+
Sbjct: 48 VAEFLGDLTFVYVGTMQA--SLFQYADGILHAAFAHGFTIFILVTAFGHISGGHFNPAVS 105
Query: 435 LASLIWGAISFPL--AIAFIVAQCAGAILGYGLLIAVSHIDMDGVC---MTLPRTEITLF 599
A I GA P+ ++V+Q G I G L AV + C TL +
Sbjct: 106 WA--IAGAGKMPIFHLPFYVVSQLLGGICGAFLTAAVLSQEQLTSCEAGATLLSPGSQWW 163
Query: 600 QALIVEAVLT 629
Q LI E V+T
Sbjct: 164 QGLIAETVVT 173
>Z70753-13|CAA94770.2| 273|Caenorhabditis elegans Hypothetical
protein F40F9.9 protein.
Length = 273
Score = 45.6 bits (103), Expect = 4e-05
Identities = 41/130 (31%), Positives = 56/130 (43%), Gaps = 5/130 (3%)
Frame = +3
Query: 255 VSEFISTLLLLVFGCMACIPHAGYLPQPPIYGALGFGLVVSFNVQIFGHISGAHMNPSVT 434
V+EF+ L + G M ++ A G + V FGHISG H NP+V+
Sbjct: 48 VAEFLGDLTFVYVGTMQA--SLFQYADGILHAAFAHGFTIFILVTAFGHISGGHFNPAVS 105
Query: 435 LASLIWGAISFPL--AIAFIVAQCAGAILGYGLLIAVSHIDMDGVC---MTLPRTEITLF 599
A I GA P+ ++V+Q G I G L AV + C TL +
Sbjct: 106 WA--IAGAGKMPIFHLPFYVVSQLLGGICGAFLTAAVLSQEQLTSCEAGATLLSPGSQWW 163
Query: 600 QALIVEAVLT 629
Q LI E V+T
Sbjct: 164 QGLIAETVVT 173
>AL034365-7|CAA22259.1| 421|Caenorhabditis elegans Hypothetical
protein Y69E1A.7 protein.
Length = 421
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +3
Query: 351 ALGFGLVVSFNVQIFGHISGAHMNPSVTLASLIWGAISFPLAIAFIVAQCAGAILG 518
++G+GLV+ V + ISGAH+NP+V+ L G I+ + + VAQ GA LG
Sbjct: 158 SVGWGLVLMLAVLMGSKISGAHLNPAVSFFQLTQGKINLIRFLVYAVAQNIGAFLG 213
>Z71185-1|CAA94903.1| 290|Caenorhabditis elegans Hypothetical
protein C35A5.1 protein.
Length = 290
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +3
Query: 258 SEFISTLLLLVFGCMACIPHAGYLPQPPIYGALGFGLVVSFNVQIFGHISGAHMNPSVTL 437
+EF+ T + + G M + P + AL GL + +FG ISG H NP V+
Sbjct: 22 AEFLGTFIFIFSGTMQANVYDISQPVGLTHAALTHGLATIVVIAVFGKISGGHFNPVVSW 81
Query: 438 ASLI 449
A ++
Sbjct: 82 AMVL 85
>AL117195-27|CAE18006.1| 243|Caenorhabditis elegans Hypothetical
protein Y57A10A.35 protein.
Length = 243
Score = 35.1 bits (77), Expect = 0.050
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 8/143 (5%)
Frame = +3
Query: 246 RQIVSEFISTLLLLVFGCMACIPHAGYLPQPPIYGALG-FGLVVSFNVQIFGHISGAHMN 422
R + EF+ + +F +AC +Y L F L ++ + H++ AH+N
Sbjct: 21 RPNIGEFLGAV---IFSFLACFAGQYQRSNDLVYPFLSAFSLYIARC--LVSHLTPAHLN 75
Query: 423 PSVTLASLIWGAISFPLAIAFIVAQCAGAILGYGLLIAV-------SHIDMDGVCMTLPR 581
P+++L + I L I F Q G + G L A+ +I M +
Sbjct: 76 PAISLLQWLRNEIPLVLLITFCFVQLIGFLFGVTLFRALVTQTEFNDYIVMYEIVAVDGT 135
Query: 582 TEITLFQALIVEAVLTAALSFLN 650
+I QA ++E VL+ N
Sbjct: 136 RKINRLQAFLLEVVLSMIFFMAN 158
>Z83111-4|CAB05535.2| 498|Caenorhabditis elegans Hypothetical
protein F57G8.5 protein.
Length = 498
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 240 EWRQIVSEFISTLLLLVFGCMACIPHAGYLPQPPIYGALGFGLVVSFNVQI 392
E + + S FI + LL+FG + + L PP++G L G+V+ NV +
Sbjct: 52 ENKTVKSTFI--IFLLLFGGLFAAKSSNALRLPPLFGCLALGIVIR-NVDV 99
>AC006769-15|AAF60587.1| 337|Caenorhabditis elegans Serpentine
receptor, class j protein19 protein.
Length = 337
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/109 (19%), Positives = 47/109 (43%)
Frame = +3
Query: 330 PQPPIYGALGFGLVVSFNVQIFGHISGAHMNPSVTLASLIWGAISFPLAIAFIVAQCAGA 509
P+ Y + F + + ++ ++G S + W I IA +
Sbjct: 155 PEMRDYIRIPFRKLHNESIDNINFVAGLFSEASPDIVQRSWAGIVLLTMIASY-SMILYF 213
Query: 510 ILGYGLLIAVSHIDMDGVCMTLPRTEITLFQALIVEAVLTAALSFLNCA 656
+LGY ++ + HI+ + + + LF+AL ++ ++ +SF+ C+
Sbjct: 214 VLGYKIITGL-HIESVTMSQQTAQMQKQLFKALTIQTIIPICVSFMPCS 261
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +2
Query: 383 CPNIWTYIWSAHESVRHT--GLADMGRDIVSAGYCV 484
CP W+ +W+ + V HT G G+ + S G C+
Sbjct: 1403 CPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCL 1438
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +2
Query: 383 CPNIWTYIWSAHESVRHT--GLADMGRDIVSAGYCV 484
CP W+ +W+ + V HT G G+ + S G C+
Sbjct: 1660 CPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCL 1695
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +2
Query: 383 CPNIWTYIWSAHESVRHT--GLADMGRDIVSAGYCV 484
CP W+ +W+ + V HT G G+ + S G C+
Sbjct: 1659 CPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCL 1694
>J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein.
Length = 313
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +2
Query: 383 CPNIWTYIWSAHESVRHT--GLADMGRDIVSAGYCV 484
CP W+ +W+ + V HT G G+ + S G C+
Sbjct: 214 CPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCL 249
>AF022980-14|AAG24190.1| 332|Caenorhabditis elegans Serpentine
receptor, class j protein57 protein.
Length = 332
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 435 LASLIWGAISFPLAIAFIVAQCAGAILGYGLLIAVSHIDMDGVCMTLPRTEITLFQALIV 614
LA ++W A+S I+F+ I+ ++ ++ + ++ T + ++ L +ALIV
Sbjct: 198 LAVMMWSAVSVASIISFL-------IMARMIMYKLNKMTVNASKRT-SKFQLELLRALIV 249
Query: 615 EAVLTAALSFLNC-ACW 662
+ V+ +SF C CW
Sbjct: 250 QTVIPIFISFSPCLLCW 266
>Z66564-6|CAA91473.4| 737|Caenorhabditis elegans Hypothetical
protein F52D10.1 protein.
Length = 737
Score = 28.3 bits (60), Expect = 5.7
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 8/139 (5%)
Frame = +3
Query: 246 RQIVSEFISTLLLLVFGCMACIPHAGYLPQPPIYGALGFGLVVS---FNVQIFGHISGAH 416
R+ VS+ IST + L+F + G L + GA+ VV +FG G
Sbjct: 255 RRSVSKVISTAVFLIFTILPTSIAYGMLNENNTNGAINVQKVVLGQWIGSLLFGIFGGQQ 314
Query: 417 MNPSVTLASL-IWGAISFPLAIA----FIVAQCAGAILGYGLLIAVSHIDMDGVCMTLPR 581
+ T A L I+ A+ + +A F + I GLLI S + + R
Sbjct: 315 LLILSTTAPLSIYIAVIYQVAQTNDWDFFQMYASVGIYAMGLLILASVFQLASLMKFTTR 374
Query: 582 TEITLFQALIVEAVLTAAL 638
+ +F I A++ A+
Sbjct: 375 STEEIFSVFIALALIIKAI 393
>AY887904-1|AAX34416.1| 737|Caenorhabditis elegans anion
transporter ABTS-2 protein.
Length = 737
Score = 28.3 bits (60), Expect = 5.7
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 8/139 (5%)
Frame = +3
Query: 246 RQIVSEFISTLLLLVFGCMACIPHAGYLPQPPIYGALGFGLVVS---FNVQIFGHISGAH 416
R+ VS+ IST + L+F + G L + GA+ VV +FG G
Sbjct: 255 RRSVSKVISTAVFLIFTILPTSIAYGMLNENNTNGAINVQKVVLGQWIGSLLFGIFGGQQ 314
Query: 417 MNPSVTLASL-IWGAISFPLAIA----FIVAQCAGAILGYGLLIAVSHIDMDGVCMTLPR 581
+ T A L I+ A+ + +A F + I GLLI S + + R
Sbjct: 315 LLILSTTAPLSIYIAVIYQVAQTNDWDFFQMYASVGIYAMGLLILASVFQLASLMKFTTR 374
Query: 582 TEITLFQALIVEAVLTAAL 638
+ +F I A++ A+
Sbjct: 375 STEEIFSVFIALALIIKAI 393
>AL032630-9|CAA21565.1| 369|Caenorhabditis elegans Hypothetical
protein Y62H9A.9 protein.
Length = 369
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 422 SVRHTGLADMGRDIVSAGYCVYSSTMRRSDFRIRIVNSCFAHRHG 556
S+ + L+ + +V YC ++T +RSD + +N+C H HG
Sbjct: 91 SLSNGALSYLLAHVVGEQYC--TATSKRSDVFVFSLNTCEIHSHG 133
>AF016436-4|AAC25895.2| 331|Caenorhabditis elegans Serpentine
receptor, class j protein39 protein.
Length = 331
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 579 RTEITLFQALIVEAVLTAALSFLNCA-CW 662
R + LF+ALIV+ + +SF C CW
Sbjct: 238 RFQFELFRALIVQTTIPIVISFAPCLFCW 266
>Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical
protein F48C11.2 protein.
Length = 708
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +3
Query: 120 SAKMTVSATNPQSVIEVIENKVRSDVSQASGCRA----MYAWCYEWRQIVSEFISTLLLL 287
S + + T S +V S S+ SGC ++ C +WR +++ + LLL
Sbjct: 222 SGSGSATTTCKCSAGDVSATTAASACSEKSGCLKNQWKIFGMCVDWRAMLALLLIGLLLF 281
Query: 288 VFGCMA-CIPHA 320
+ C+ C HA
Sbjct: 282 LCCCICHCCMHA 293
>U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical
protein T19D12.4b protein.
Length = 1015
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 701 NRNGVLFVLVDGIP 660
NRN VLF+L DG+P
Sbjct: 473 NRNKVLFILTDGVP 486
>U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical
protein T19D12.4a protein.
Length = 1028
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 701 NRNGVLFVLVDGIP 660
NRN VLF+L DG+P
Sbjct: 486 NRNKVLFILTDGVP 499
>AF045644-2|AAC02600.1| 454|Caenorhabditis elegans Hypothetical
protein F57H12.4 protein.
Length = 454
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 476 YCVYSSTMRRSDFRIRIVNSCFAHRHG 556
YCV++S RR+ ++ S F+ RHG
Sbjct: 336 YCVFNSRFRRAALKLLGCPSFFSSRHG 362
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,238,667
Number of Sequences: 27780
Number of extensions: 355498
Number of successful extensions: 1070
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -