Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30588
         (709 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    23   2.8  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   2.8  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.7  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.7  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   6.6  

>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 132 TVSATNPQSVIEVIENKVRSDVSQAS 209
           T SATNP ++  + +N + ++V+  S
Sbjct: 73  TSSATNPNAMKTIFKNTIFTNVASTS 98


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 231 WCYEWRQIVSEFISTLLL 284
           W YEW++++   I   LL
Sbjct: 629 WVYEWKELIPSHIMAGLL 646


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 606 KLETM*FPYVVTSYRPHPCLC 544
           K+ET+   Y+  S  P PC C
Sbjct: 461 KVETVGDKYMAVSGLPEPCRC 481


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 606 KLETM*FPYVVTSYRPHPCLC 544
           K+ET+   Y+  S  P PC C
Sbjct: 461 KVETVGDKYMAVSGLPEPCRC 481


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/37 (21%), Positives = 18/37 (48%)
 Frame = -1

Query: 193 SDRTLFSITSMTDWGLVAETVIFADSLNFDDTENHIT 83
           +++    I    +WG     +I  ++ NF + E+ +T
Sbjct: 2   AEKLRICIVGSGNWGSTIAKIIGINAANFSNFEDRVT 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,584
Number of Sequences: 438
Number of extensions: 4313
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)