Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30586
(713 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40029-10|AAN65326.1| 644|Caenorhabditis elegans Hypothetical p... 29 2.5
U40029-9|AAN65325.1| 727|Caenorhabditis elegans Hypothetical pr... 29 2.5
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 29 4.4
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 29 4.4
AC024778-3|AAF60565.1| 295|Caenorhabditis elegans Hypothetical ... 29 4.4
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 5.8
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 28 5.8
U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated p... 28 7.6
U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated p... 28 7.6
M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related... 28 7.6
>U40029-10|AAN65326.1| 644|Caenorhabditis elegans Hypothetical
protein F10G7.9b protein.
Length = 644
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -2
Query: 430 KNGKQSTSPKTRHLGSSRSTNGASRYFKHRSPFSSNPSLATKGSTSKLTLRYSPLSFSPD 251
K+ Q +PK SSR +N F+ +P + +P + KL + S LS +P+
Sbjct: 183 KSSSQEKTPKRVRKNSSRLSNSVKNIFE--APVAISPQVPVAKIEVKLATKTSNLSIAPE 240
Query: 250 L 248
+
Sbjct: 241 V 241
>U40029-9|AAN65325.1| 727|Caenorhabditis elegans Hypothetical
protein F10G7.9a protein.
Length = 727
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -2
Query: 430 KNGKQSTSPKTRHLGSSRSTNGASRYFKHRSPFSSNPSLATKGSTSKLTLRYSPLSFSPD 251
K+ Q +PK SSR +N F+ +P + +P + KL + S LS +P+
Sbjct: 266 KSSSQEKTPKRVRKNSSRLSNSVKNIFE--APVAISPQVPVAKIEVKLATKTSNLSIAPE 323
Query: 250 L 248
+
Sbjct: 324 V 324
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 561 HDDLDLESTSKYMQSASMRHFDKAARHENPLIVAAGNYI 445
H D + E+ ++ + S RH + E+P IV +G YI
Sbjct: 5374 HSDEEDENDAEVIDSEFYRHSQEQNNEEDPSIVESGEYI 5412
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 561 HDDLDLESTSKYMQSASMRHFDKAARHENPLIVAAGNYI 445
H D + E+ ++ + S RH + E+P IV +G YI
Sbjct: 5374 HSDEEDENDAEVIDSEFYRHSQEQNNEEDPSIVESGEYI 5412
>AC024778-3|AAF60565.1| 295|Caenorhabditis elegans Hypothetical
protein Y42H9B.3 protein.
Length = 295
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -2
Query: 406 PKTRHLGSSRSTNGASRYFKHRSPFSSNPSLATKGSTSKLTLRYSPLS 263
PK +S ++ ASR +S SS+ ++ GSTS +T ++ LS
Sbjct: 55 PKKNSSATSSLSSAASRSLASKSLASSSSGYSSLGSTSSITTVFNGLS 102
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2
Query: 427 NGKQSTSPKTRHLGSSRSTNGASRYFKHRSPFSSNPSLATKGSTS 293
N QSTSP T SS ++G + SP S+ +++GSTS
Sbjct: 1095 NPSQSTSPSTSGATSSPGSSGTTLTSISPSPSQSSTIGSSQGSTS 1139
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 438 PAERMESSRRRPKHVISDPPDP 373
P ++RRR +HV+S PP P
Sbjct: 4 PVVEFTTARRRKRHVVSTPPPP 25
>U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated
protein 104, isoforma protein.
Length = 1584
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 436 CGKNGKQSTSPKTRHLGSSRSTNGASRYFKHRSPFSSNPS 317
C NGKQ T+P H G SR G F++ P + S
Sbjct: 533 CYINGKQVTTPTVLHTG-SRVILGEHHVFRYNDPQEARQS 571
>U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated
protein 104, isoformb protein.
Length = 1628
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 436 CGKNGKQSTSPKTRHLGSSRSTNGASRYFKHRSPFSSNPS 317
C NGKQ T+P H G SR G F++ P + S
Sbjct: 533 CYINGKQVTTPTVLHTG-SRVILGEHHVFRYNDPQEARQS 571
>M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related
protein protein.
Length = 1584
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 436 CGKNGKQSTSPKTRHLGSSRSTNGASRYFKHRSPFSSNPS 317
C NGKQ T+P H G SR G F++ P + S
Sbjct: 533 CYINGKQVTTPTVLHTG-SRVILGEHHVFRYNDPQEARQS 571
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,489,978
Number of Sequences: 27780
Number of extensions: 282046
Number of successful extensions: 722
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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