Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30585
         (761 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0448 - 16020773-16021066,16023040-16023291,16023470-160236...    29   5.3  
11_01_0791 + 6627961-6630702                                           28   7.1  
02_02_0173 - 7433744-7433775,7434002-7434241,7434548-7437410           28   7.1  
12_02_1124 + 26301884-26303725                                         28   9.3  

>04_03_0448 -
           16020773-16021066,16023040-16023291,16023470-16023605,
           16023713-16023937,16024467-16024851,16025142-16025421
          Length = 523

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 439 PDASKAMKIPRHFTDTFARMNILKLSV*DKCMKAL 543
           P+  +A+   RH  ++F R N+LK  + D+  +AL
Sbjct: 134 PELVEAISFARHHLESFNRRNVLKAPLADQVKRAL 168


>11_01_0791 + 6627961-6630702
          Length = 913

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = -1

Query: 365 IIKTVIQDVRSLSWRRLVVKGFIALCRKGASCNRNPLDSILAYTC 231
           ++K VIQD+ S +    VVKG+I   RK A    + +D    Y C
Sbjct: 51  LMKDVIQDLDSTNTNMNVVKGWIDELRKLAYRVEDIMDKYSYYAC 95


>02_02_0173 - 7433744-7433775,7434002-7434241,7434548-7437410
          Length = 1044

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 364 ITTDLSNLSSLIRFIYSNTEYSFSIPDASK 453
           I   L+NLSSL  F+ +  +   SIPD SK
Sbjct: 254 IPPSLANLSSLTAFLAAQNQLQGSIPDFSK 283


>12_02_1124 + 26301884-26303725
          Length = 613

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -2

Query: 727 IFWLVFDVLKKSYLIYFY 674
           +F L +DV+KK YL YFY
Sbjct: 315 LFALSYDVIKKPYLKYFY 332


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,748,978
Number of Sequences: 37544
Number of extensions: 272791
Number of successful extensions: 505
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)