Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30585
(761 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 26 0.44
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 25 0.58
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 4.1
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 4.1
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 4.1
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 4.1
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 5.4
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 5.4
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 5.4
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 5.4
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 7.1
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 22 7.1
DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein. 21 9.4
DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. 21 9.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.4
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 21 9.4
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 9.4
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 25.8 bits (54), Expect = 0.44
Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -1
Query: 623 SVLTYLYCIPLFVYTYLYYRFI-HTLS-DKAFIHLSHTDNFNIFIRANVSVKCRGIFIAL 450
++ T+ YCIP+ + Y Y + + H ++ +KA + N + +R+N + + I +
Sbjct: 214 TIFTFSYCIPMILIIYYYSQIVSHVVNHEKALREQAKKMNVD-SLRSNANTSSQSAEIRI 272
Query: 449 DASGI 435
+ I
Sbjct: 273 AKAAI 277
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 25.4 bits (53), Expect = 0.58
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +3
Query: 30 WLSFFLNHRMCSAHRNLASLFLKRQNTYVVYCKLRVFTRIGLFAIIFDVF*VLCYYFSSV 209
W+SF++NH SA L + T + + RI I D++ V+C+ F
Sbjct: 260 WVSFWINHEATSARVALGITTVLTMTTISTGVRSSL-PRISYVKAI-DIYLVMCFVFVFA 317
Query: 210 SL 215
+L
Sbjct: 318 AL 319
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 566 YNINRYIQIKVYNIN 610
YN N Y +++ YNIN
Sbjct: 102 YNNNNYKKLQYYNIN 116
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 566 YNINRYIQIKVYNIN 610
YN N Y +++ YNIN
Sbjct: 102 YNNNNYKKLQYYNIN 116
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 566 YNINRYIQIKVYNIN 610
YN N Y +++ YNIN
Sbjct: 102 YNNNNYKKLQYYNIN 116
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 566 YNINRYIQIKVYNIN 610
YN N Y +++ YNIN
Sbjct: 102 YNNNNYKKLQYYNIN 116
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 563 IYNINRYIQIKVYNIN 610
I+N N Y +++ YNIN
Sbjct: 312 IHNNNNYKKLQYYNIN 327
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 563 IYNINRYIQIKVYNIN 610
I+N N Y +++ YNIN
Sbjct: 323 IHNNNNYKKLQYYNIN 338
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 563 IYNINRYIQIKVYNIN 610
I+N N Y +++ YNIN
Sbjct: 323 IHNNNNYKKLQYYNIN 338
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 563 IYNINRYIQIKVYNIN 610
I+N N Y +++ YNIN
Sbjct: 312 IHNNNNYKKLQYYNIN 327
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -1
Query: 611 YLYCIPLFVYTYLYYRFIHTLS 546
++Y +PLF+ Y Y+ I ++
Sbjct: 223 WVYFVPLFLIIYSYWFIIQAVA 244
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -1
Query: 611 YLYCIPLFVYTYLYYRFIHTLS 546
++Y +PLF+ Y Y+ I ++
Sbjct: 99 WVYFVPLFLIIYSYWFIIQAVA 120
>DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein.
Length = 135
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 506 NIFIRANVSVKCRG 465
NI+IR N VKC G
Sbjct: 111 NIYIRFNKLVKCFG 124
>DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein.
Length = 135
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 506 NIFIRANVSVKCRG 465
NI+IR N VKC G
Sbjct: 111 NIYIRFNKLVKCFG 124
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = -3
Query: 342 RPLLELEKISSEGFHS 295
+PLLEL+K++ + F+S
Sbjct: 113 QPLLELKKLTVQTFNS 128
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 21.4 bits (43), Expect = 9.4
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -2
Query: 115 TYVFCRFKNNDARFLCAEHIR*FKKNDNH*VFE 17
T VF + + CAE+ R FKK +FE
Sbjct: 241 TRVFNTLVDLVPKHACAEYRRNFKKMQEEKIFE 273
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 614 TYLYCIPLFVYTYLYYR 564
T + +PLFV + YY+
Sbjct: 212 TISFYLPLFVMVFTYYK 228
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,334
Number of Sequences: 438
Number of extensions: 3946
Number of successful extensions: 21
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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