Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30573
(672 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 140 6e-34
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 140 6e-34
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 137 8e-33
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 137 8e-33
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 135 3e-32
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 135 3e-32
AL021491-3|CAA16372.1| 165|Caenorhabditis elegans Hypothetical ... 30 1.7
Z72515-3|CAA96683.2| 330|Caenorhabditis elegans Hypothetical pr... 27 9.2
AF040659-5|AAO12389.1| 674|Caenorhabditis elegans Half transpor... 27 9.2
AF040659-4|AAK39394.1| 815|Caenorhabditis elegans Half transpor... 27 9.2
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 140 bits (340), Expect = 6e-34
Identities = 64/151 (42%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Frame = -3
Query: 670 SDLFDNPALMFQHRYSKPFIPIVCFGLPTILPVILWDELLVVA-WNLTIMRYVINFHVFF 494
SDL+++P LMFQ + P + I CF LPT +PV+LW E +A + + RY H +
Sbjct: 171 SDLYEDPVLMFQRKNYLPLVGIFCFALPTFIPVVLWGESAFIAFYTAALFRYCFTLHATW 230
Query: 493 LVNSVAHIWGNKPYDKTIKSAENNLVAFATLGEGYHNYHHVFPWDYRCTELGRTWLNYTK 314
+NSV+H G +PYD S +N + A +GEG HNYHH FP DYR +E +LN+T+
Sbjct: 231 CINSVSHWVGWQPYDHQASSVDNLWTSIAAVGEGGHNYHHTFPQDYRTSEHAE-FLNWTR 289
Query: 313 LFIDLCAKVGLAYDLKVVSDDVILRRVKRTG 221
+ ID A +G+ YD K ++VI R+ K+ G
Sbjct: 290 VLIDFGASIGMVYDRKTTPEEVIQRQCKKFG 320
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 140 bits (340), Expect = 6e-34
Identities = 64/151 (42%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Frame = -3
Query: 670 SDLFDNPALMFQHRYSKPFIPIVCFGLPTILPVILWDELLVVA-WNLTIMRYVINFHVFF 494
SDL+++P LMFQ + P + I CF LPT +PV+LW E +A + + RY H +
Sbjct: 171 SDLYEDPVLMFQRKNYLPLVGIFCFALPTFIPVVLWGESAFIAFYTAALFRYCFTLHATW 230
Query: 493 LVNSVAHIWGNKPYDKTIKSAENNLVAFATLGEGYHNYHHVFPWDYRCTELGRTWLNYTK 314
+NSV+H G +PYD S +N + A +GEG HNYHH FP DYR +E +LN+T+
Sbjct: 231 CINSVSHWVGWQPYDHQASSVDNLWTSIAAVGEGGHNYHHTFPQDYRTSEHAE-FLNWTR 289
Query: 313 LFIDLCAKVGLAYDLKVVSDDVILRRVKRTG 221
+ ID A +G+ YD K ++VI R+ K+ G
Sbjct: 290 VLIDFGASIGMVYDRKTTPEEVIQRQCKKFG 320
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 137 bits (331), Expect = 8e-33
Identities = 62/151 (41%), Positives = 90/151 (59%), Gaps = 1/151 (0%)
Frame = -3
Query: 670 SDLFDNPALMFQHRYSKPFIPIVCFGLPTILPVILWDELLVVAWNLT-IMRYVINFHVFF 494
SDLF +P L+FQ ++ P + + CF LPTI+PV W E +A+ + RY H +
Sbjct: 179 SDLFSDPVLVFQRKHYFPLVILFCFILPTIIPVYFWKETAFIAFYVAGTFRYCFTLHATW 238
Query: 493 LVNSVAHIWGNKPYDKTIKSAENNLVAFATLGEGYHNYHHVFPWDYRCTELGRTWLNYTK 314
+NS AH +G KPYD ++ + EN +GEG HN+HH FP DYR +E + N+T+
Sbjct: 239 CINSAAHYFGWKPYDTSVSAVENVFTTVVAVGEGGHNFHHTFPQDYRASEYSLIY-NWTR 297
Query: 313 LFIDLCAKVGLAYDLKVVSDDVILRRVKRTG 221
+ ID A +GL YD K ++D+ I R+V G
Sbjct: 298 VLIDTAAVLGLVYDRKTIADEFISRQVANHG 328
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 137 bits (331), Expect = 8e-33
Identities = 62/151 (41%), Positives = 90/151 (59%), Gaps = 1/151 (0%)
Frame = -3
Query: 670 SDLFDNPALMFQHRYSKPFIPIVCFGLPTILPVILWDELLVVAWNLT-IMRYVINFHVFF 494
SDLF +P L+FQ ++ P + + CF LPTI+PV W E +A+ + RY H +
Sbjct: 179 SDLFSDPVLVFQRKHYFPLVILFCFILPTIIPVYFWKETAFIAFYVAGTFRYCFTLHATW 238
Query: 493 LVNSVAHIWGNKPYDKTIKSAENNLVAFATLGEGYHNYHHVFPWDYRCTELGRTWLNYTK 314
+NS AH +G KPYD ++ + EN +GEG HN+HH FP DYR +E + N+T+
Sbjct: 239 CINSAAHYFGWKPYDTSVSAVENVFTTVVAVGEGGHNFHHTFPQDYRASEYSLIY-NWTR 297
Query: 313 LFIDLCAKVGLAYDLKVVSDDVILRRVKRTG 221
+ ID A +GL YD K ++D+ I R+V G
Sbjct: 298 VLIDTAAVLGLVYDRKTIADEFISRQVANHG 328
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 135 bits (326), Expect = 3e-32
Identities = 63/151 (41%), Positives = 87/151 (57%), Gaps = 1/151 (0%)
Frame = -3
Query: 670 SDLFDNPALMFQHRYSKPFIPIVCFGLPTILPVILWDELLVVA-WNLTIMRYVINFHVFF 494
SDL +P L+FQ ++ P + + CF LPTI+PV W E +A + RY H +
Sbjct: 180 SDLLSDPVLVFQRKHYFPLVILCCFILPTIIPVYFWKETAFIAFYTAGTFRYCFTLHATW 239
Query: 493 LVNSVAHIWGNKPYDKTIKSAENNLVAFATLGEGYHNYHHVFPWDYRCTELGRTWLNYTK 314
+NS AH +G KPYD +I EN A +GEG HN+HH FP DYR +E + N+T+
Sbjct: 240 CINSAAHYFGWKPYDSSITPVENVFTTIAAVGEGGHNFHHTFPQDYRTSEYSLKY-NWTR 298
Query: 313 LFIDLCAKVGLAYDLKVVSDDVILRRVKRTG 221
+ ID A +GL YD K D++I R+V G
Sbjct: 299 VLIDTAAALGLVYDRKTACDEIIGRQVSNHG 329
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 135 bits (326), Expect = 3e-32
Identities = 63/151 (41%), Positives = 87/151 (57%), Gaps = 1/151 (0%)
Frame = -3
Query: 670 SDLFDNPALMFQHRYSKPFIPIVCFGLPTILPVILWDELLVVA-WNLTIMRYVINFHVFF 494
SDL +P L+FQ ++ P + + CF LPTI+PV W E +A + RY H +
Sbjct: 180 SDLLSDPVLVFQRKHYFPLVILCCFILPTIIPVYFWKETAFIAFYTAGTFRYCFTLHATW 239
Query: 493 LVNSVAHIWGNKPYDKTIKSAENNLVAFATLGEGYHNYHHVFPWDYRCTELGRTWLNYTK 314
+NS AH +G KPYD +I EN A +GEG HN+HH FP DYR +E + N+T+
Sbjct: 240 CINSAAHYFGWKPYDSSITPVENVFTTIAAVGEGGHNFHHTFPQDYRTSEYSLKY-NWTR 298
Query: 313 LFIDLCAKVGLAYDLKVVSDDVILRRVKRTG 221
+ ID A +GL YD K D++I R+V G
Sbjct: 299 VLIDTAAALGLVYDRKTACDEIIGRQVSNHG 329
>AL021491-3|CAA16372.1| 165|Caenorhabditis elegans Hypothetical
protein Y44A6B.4 protein.
Length = 165
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 198 TSCARGFVRNKMQFYVKTQKPQNDSENVLQANYI 97
T C+RGFV+ K QF +N+ + +ANY+
Sbjct: 15 TLCSRGFVKIKGQFLCNGLPWKNEKVAIYEANYV 48
>Z72515-3|CAA96683.2| 330|Caenorhabditis elegans Hypothetical
protein T11A5.3 protein.
Length = 330
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 580 LPVILWDELLVVAWNLTIMRYVINFHVFFLVNSVAHIWG 464
+PV++W W L M+Y FHV F + H++G
Sbjct: 33 VPVLIW-----ATWKLWSMKYTKLFHVNFKIIIQLHLFG 66
>AF040659-5|AAO12389.1| 674|Caenorhabditis elegans Half transporter
(pgp related)protein 9, isoform b protein.
Length = 674
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = -3
Query: 556 LLVVAWNLTIMRYVINFHVFFLVNSVAHIWGNKPYDKTIKSAENNL 419
+ ++W L+++ +IN + FLVN + +W YD + +N++
Sbjct: 339 MFTLSWKLSMIT-LINIPIIFLVNKIFGVW----YDMLSEETQNSV 379
>AF040659-4|AAK39394.1| 815|Caenorhabditis elegans Half transporter
(pgp related)protein 9, isoform a protein.
Length = 815
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = -3
Query: 556 LLVVAWNLTIMRYVINFHVFFLVNSVAHIWGNKPYDKTIKSAENNL 419
+ ++W L+++ +IN + FLVN + +W YD + +N++
Sbjct: 339 MFTLSWKLSMIT-LINIPIIFLVNKIFGVW----YDMLSEETQNSV 379
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,453,613
Number of Sequences: 27780
Number of extensions: 297557
Number of successful extensions: 673
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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