Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30566
(860 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 165 3e-41
02_04_0462 + 23131433-23132836 164 7e-41
03_01_0548 + 4099386-4099847,4100435-4101316 71 2e-12
03_01_0547 + 4093196-4093657,4094267-4095148 71 2e-12
03_01_0544 + 4082528-4082989,4083585-4084466 71 2e-12
03_01_0543 + 4076981-4077442,4078145-4079026 71 2e-12
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 60 2e-09
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 60 2e-09
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 54 2e-07
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 50 3e-06
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 48 1e-05
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 45 9e-05
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 44 1e-04
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 43 3e-04
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 42 6e-04
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 42 8e-04
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 41 0.001
03_05_0511 + 25056018-25059107 40 0.002
01_06_0662 + 30987187-30987277,30987825-30990214 40 0.002
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 40 0.003
04_01_0103 + 1082077-1082167,1083037-1085477 39 0.006
02_04_0017 + 18937774-18937864,18938505-18940945 39 0.006
02_04_0148 - 20198407-20201424 37 0.018
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 37 0.024
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 36 0.055
05_07_0212 + 28434612-28435931,28436012-28436044,28436557-284366... 31 1.2
02_01_0264 - 1748883-1748888,1748943-1749017,1749453-1749868,175... 30 2.1
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 165 bits (402), Expect = 3e-41
Identities = 75/106 (70%), Positives = 83/106 (78%)
Frame = +2
Query: 266 FERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINV 445
F RTKPH NVGTIGHVDHGKTTLTAAITKVL++ A+ + +ID APEEKARGITI
Sbjct: 61 FTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARGITIAT 120
Query: 446 AHVEYQTEQRHYGHTDCPGXADYIKNMITGTGQMDGAILXAXATDG 583
AHVEY+T +RHY H DCPG ADY+KNMITG QMDG IL A DG
Sbjct: 121 AHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDG 166
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 582 GVMPQTRGHLLLAXQIGXXHXGVVINQV 665
G MPQT+ H+LLA Q+G +N+V
Sbjct: 166 GPMPQTKEHILLARQVGVPSLVCFLNKV 193
>02_04_0462 + 23131433-23132836
Length = 467
Score = 164 bits (399), Expect = 7e-41
Identities = 74/106 (69%), Positives = 83/106 (78%)
Frame = +2
Query: 266 FERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINV 445
FERTKPH N+GTIGHVDHGKTTLTAA+T VL+ + + K Y +ID APEE+ARGITIN
Sbjct: 64 FERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARGITINT 123
Query: 446 AHVEYQTEQRHYGHTDCPGXADYIKNMITGTGQMDGAILXAXATDG 583
A VEY+TE RHY H DCPG ADY+KNMITG QMDGAIL DG
Sbjct: 124 ATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADG 169
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 582 GVMPQTRGHLLLAXQIGXXHXGVVINQ 662
G MPQT+ H+LLA Q+G V +N+
Sbjct: 169 GPMPQTKEHILLAKQVGVPKIVVFLNK 195
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 70.5 bits (165), Expect = 2e-12
Identities = 43/120 (35%), Positives = 62/120 (51%), Gaps = 15/120 (12%)
Frame = +2
Query: 272 RTKPHCNVGTIGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDN 406
+ K H N+ IGHVD GK+T T + K +++N K +D
Sbjct: 3 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 407 APEEKARGITINVAHVEYQTEQRHYGHTDCPGXADYIKNMITGTGQMDGAILXAXATDGG 586
E+ RGITI++A +++T + + D PG D+IKNMITGT Q D A+L +T GG
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 70.5 bits (165), Expect = 2e-12
Identities = 43/120 (35%), Positives = 62/120 (51%), Gaps = 15/120 (12%)
Frame = +2
Query: 272 RTKPHCNVGTIGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDN 406
+ K H N+ IGHVD GK+T T + K +++N K +D
Sbjct: 3 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 407 APEEKARGITINVAHVEYQTEQRHYGHTDCPGXADYIKNMITGTGQMDGAILXAXATDGG 586
E+ RGITI++A +++T + + D PG D+IKNMITGT Q D A+L +T GG
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 70.5 bits (165), Expect = 2e-12
Identities = 43/120 (35%), Positives = 62/120 (51%), Gaps = 15/120 (12%)
Frame = +2
Query: 272 RTKPHCNVGTIGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDN 406
+ K H N+ IGHVD GK+T T + K +++N K +D
Sbjct: 3 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 407 APEEKARGITINVAHVEYQTEQRHYGHTDCPGXADYIKNMITGTGQMDGAILXAXATDGG 586
E+ RGITI++A +++T + + D PG D+IKNMITGT Q D A+L +T GG
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 70.5 bits (165), Expect = 2e-12
Identities = 43/120 (35%), Positives = 62/120 (51%), Gaps = 15/120 (12%)
Frame = +2
Query: 272 RTKPHCNVGTIGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDN 406
+ K H N+ IGHVD GK+T T + K +++N K +D
Sbjct: 3 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 407 APEEKARGITINVAHVEYQTEQRHYGHTDCPGXADYIKNMITGTGQMDGAILXAXATDGG 586
E+ RGITI++A +++T + + D PG D+IKNMITGT Q D A+L +T GG
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 60.5 bits (140), Expect = 2e-09
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Frame = +2
Query: 290 NVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YA-DIDNAPEEKA 424
N+ +GHVD GK+TL+ + +L ++ A++KG YA +D + EE+
Sbjct: 249 NLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEERE 308
Query: 425 RGITINVAHVEYQTEQRHYGHTDCPGXADYIKNMITGTGQMDGAILXAXATDG 583
RG+T+ VA +T++ D PG D++ NMI+G Q D AIL A G
Sbjct: 309 RGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTG 361
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 60.5 bits (140), Expect = 2e-09
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Frame = +2
Query: 290 NVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YA-DIDNAPEEKA 424
N+ +GHVD GK+TL+ + +L ++ A++KG YA +D + EE+
Sbjct: 249 NLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEERE 308
Query: 425 RGITINVAHVEYQTEQRHYGHTDCPGXADYIKNMITGTGQMDGAILXAXATDG 583
RG+T+ VA +T++ D PG D++ NMI+G Q D AIL A G
Sbjct: 309 RGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTG 361
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 53.6 bits (123), Expect = 2e-07
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = +2
Query: 365 LNLAQKKG---YA-DIDNAPEEKARGITINVAHVEYQTEQRHYGHTDCPGXADYIKNMIT 532
LNLA KG YA +D + +E+ RGIT+ V + T+ H D PG D++ NMI+
Sbjct: 272 LNLAIGKGSFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMIS 331
Query: 533 GTGQMDGAILXAXATDG 583
G Q D AIL A+ G
Sbjct: 332 GATQSDAAILVIDASIG 348
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 49.6 bits (113), Expect = 3e-06
Identities = 30/98 (30%), Positives = 47/98 (47%)
Frame = +2
Query: 290 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTE 469
NV I HVDHGKTTL + + ++ ++ +D+ E+ RGITI +
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG-ADIPHERA---MDSISLERERGITIASKVTSVSWK 121
Query: 470 QRHYGHTDCPGXADYIKNMITGTGQMDGAILXAXATDG 583
+ D PG AD+ + G ++GA+L A +G
Sbjct: 122 ENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEG 159
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 47.6 bits (108), Expect = 1e-05
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = +2
Query: 290 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINV--AHVEYQ 463
N I H+DHGK+TL + ++ + + K +DN E+ RGITI + A + Y
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKREMK-QQFLDNMDLERERGITIKLQAARMRYI 137
Query: 464 TEQRHY--GHTDCPGXADYIKNMITGTGQMDGAILXAXATDGGNA 592
Y D PG D+ + +GA+L A+ G A
Sbjct: 138 MNDEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEA 182
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 44.8 bits (101), Expect = 9e-05
Identities = 40/141 (28%), Positives = 60/141 (42%), Gaps = 25/141 (17%)
Frame = +2
Query: 233 ILKRHYAEKQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLS-------DLNLAQKKGY 391
+ K H ++ R + N+GTIGHV HGK+T+ AI+ V + + N+ K GY
Sbjct: 44 VTKLHPLSPEVISR-QATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGY 102
Query: 392 AD--IDNAPEEKARGITINVAHVEYQTEQ----------------RHYGHTDCPGXADYI 517
A+ I +EK A+ + + RH DCPG +
Sbjct: 103 ANAKIYKCEDEKCPRPMCYKAYGSGKEDSPHCDVPGFENTRMKLLRHVSFVDCPGHDILM 162
Query: 518 KNMITGTGQMDGAILXAXATD 580
M+ G MDGA+L A +
Sbjct: 163 ATMLNGAAIMDGALLLIAANE 183
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Frame = +2
Query: 290 NVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEY 460
N+ + HVDHGKTTL ++ KV D + Q++ +D+ E+ RGITI +
Sbjct: 121 NIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVVQER---IMDSNDLERERGITILSKNTSI 177
Query: 461 QTEQRHYGHTDCPGXADYIKNMITGTGQMDGAILXAXATDG 583
+ D PG +D+ + ++G +L + +G
Sbjct: 178 TYKGTKINIIDTPGHSDFGGEVERVLNMVEGVLLVVDSVEG 218
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 43.2 bits (97), Expect = 3e-04
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Frame = +2
Query: 290 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYAD---IDNAPEEKARGITI--NVAHV 454
N I HVDHGK+TL + ++ + KKG+ +D E+ RGIT+ A +
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTI----KKGHGQPQYLDKLQVERERGITVKAQTATM 114
Query: 455 EYQTEQRHYGHTDCPGXADYIKNMITGTGQMD 550
Y+ +D P Y+ N+I G +D
Sbjct: 115 FYRHANNQLPASDQPDAPSYLLNLIDTPGHVD 146
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = +2
Query: 383 KGYADIDNAPEEKARGITINVAHVEYQTEQRHYGHTDCPGXADYIKNMITGTGQMDGAIL 562
K + D+ E K G T+ V ++TE + D PG Y+ NMI+G Q D +L
Sbjct: 3 KDHKDLSIKMEPK--GKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVL 60
Query: 563 XAXATDG 583
A G
Sbjct: 61 VISARKG 67
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 41.5 bits (93), Expect = 8e-04
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
Frame = +2
Query: 290 NVGTIGHVDHGKTTLTAAITKVLSDLN-LAQKKGY----ADIDNAPEEKARGITINVAHV 454
N+G H+D GKTTLT + ++ + + +G A +D+ E+ +GITI A
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAAT 129
Query: 455 EYQTEQRHYGHTDCPGXADYIKNMITGTGQMDGAILXAXATDG 583
D PG D+ + +DGAIL + G
Sbjct: 130 YCTWNGYQVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGG 172
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +2
Query: 398 IDNAPEEKARGITINVAHVEYQTEQRHYGHTDCP----GXADYIKNMITGTGQMDGAILX 565
+D EE+ +G T+ V ++TE + D P G Y+ NMI+G Q D +L
Sbjct: 47 MDTNEEERLKGKTVEVGRAHFETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLV 106
Query: 566 AXATDG 583
A G
Sbjct: 107 ISARKG 112
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 40.3 bits (90), Expect = 0.002
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Frame = +2
Query: 290 NVGTIGHVDHGKTTLTAAITKVLSD-LNLAQKKG-YADIDNAPEEKARGITINVAHVEYQ 463
N + HVDHGKTTL + D L + G +D EE+ R IT+ A V
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCGDGLVHPRLAGRLRFMDYLDEEQRRAITMKSAAVVLH 71
Query: 464 TEQRHYGHTDCPGXADYIKNMITGTGQMDGAILXAXATDG 583
D PG D+ + + D A++ A +G
Sbjct: 72 HGGHRVNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEG 111
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Frame = +2
Query: 257 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 436
++I ++ N+ + HVDHGK+TLT ++ + D+ +E RGIT
Sbjct: 10 RRIMDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSRSDEAERGIT 69
Query: 437 INVAHVEYQTEQRHYGHTDCPGXAD---YIKNMITGTGQMD 550
I + E G D Y+ N+I G +D
Sbjct: 70 IKSTGISLYYEMSDESLKSYKGDRDGNEYLINLIDSPGHVD 110
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 39.9 bits (89), Expect = 0.003
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
Frame = +2
Query: 290 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTE 469
N+ I HVDHGK+TLT ++ + D +E RGITI + E
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDTRADEAERGITIKSTGISLYYE 80
Query: 470 QRHYGHTDCPGXAD---YIKNMITGTGQMD 550
G D Y+ N+I G +D
Sbjct: 81 MTDAALRSFEGKRDGNSYLINLIDSPGHID 110
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 38.7 bits (86), Expect = 0.006
Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Frame = +2
Query: 257 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 436
++I ++ N+ I HVDHGK+TLT ++ + D +E RGIT
Sbjct: 10 RRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGIT 69
Query: 437 INVAHVEYQTEQRHYGHTDCPGXAD---YIKNMITGTGQMD 550
I + E G D Y+ N+I G +D
Sbjct: 70 IKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVD 110
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 38.7 bits (86), Expect = 0.006
Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Frame = +2
Query: 257 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 436
++I ++ N+ I HVDHGK+TLT ++ + D +E RGIT
Sbjct: 10 RRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGIT 69
Query: 437 INVAHVEYQTEQRHYGHTDCPGXAD---YIKNMITGTGQMD 550
I + E G D Y+ N+I G +D
Sbjct: 70 IKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVD 110
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 37.1 bits (82), Expect = 0.018
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Frame = +2
Query: 290 NVGTIGHVDHGKTTLT-AAITKVLSDLNLAQK-KGYADI-DNAPEEKARGITINVAHVEY 460
N + HVDHGKT+L I S+ ++++ G A + D+ EE+ R IT+ A +
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGSERRVSERMAGSARVMDHLEEEQRRAITMKSASIAL 77
Query: 461 QT-EQRHYGH----TDCPGXADYIKNMITGTGQMDGAILXAXATDG 583
+ + GH D PG D+ + D A++ A +G
Sbjct: 78 RRGGEDGGGHRVHLIDSPGHIDFCSEVSAAARLADSALVLVDAAEG 123
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 36.7 bits (81), Expect = 0.024
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 8/106 (7%)
Frame = +2
Query: 290 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADI---DNAPEEKARGITINVAHVEY 460
NV +GH+ HGKT + + +++ +G + D +E+ R ++I +
Sbjct: 150 NVALVGHLQHGKTVFMDMLVEQTHEVDTFDSEGERHVRFTDTRVDEQERRVSIKAVPMSL 209
Query: 461 QTE---QRHY--GHTDCPGXADYIKNMITGTGQMDGAILXAXATDG 583
E + Y D PG ++ M DGA+L A +G
Sbjct: 210 VLEGGNGKSYLCNIMDTPGHVNFSDEMTAALRIADGAVLVVDAAEG 255
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 35.5 bits (78), Expect = 0.055
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +2
Query: 302 IGHVDHGKTTLTAAITKVLS-DLNLAQ-KKGYADIDNAPEEKARGITINVAHVEYQTEQR 475
+ H+D GKTT T + + + + ++G +D +E+ RGITI +
Sbjct: 110 MAHIDAGKTTTTERVLYYTGRNYKIGEFQEGTVTMDWMEQEQERGITITSPPTTAFWNKH 169
Query: 476 HYGHTDCPGXADYIKNMITGTGQMDGAIL 562
D PG D+ + +DGAI+
Sbjct: 170 RINIIDTPGHVDFTLEVERALRVLDGAIM 198
>05_07_0212 +
28434612-28435931,28436012-28436044,28436557-28436670,
28436767-28437102,28437221-28437283,28437364-28437519,
28437650-28437715,28439074-28439310,28439403-28439678,
28440060-28440248,28440459-28440620
Length = 983
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 239 KRHYAEKQIFERTKPHCNVGTI-GHVDHGKTTLTAAITK 352
K+ + +++ ++ + + TI GHVDHGKTTL I K
Sbjct: 411 KKEFLDEEDLDKLEDRPPIVTIMGHVDHGKTTLLDYIRK 449
>02_01_0264 -
1748883-1748888,1748943-1749017,1749453-1749868,
1750095-1750215,1750423-1750533,1750636-1750737,
1750896-1750989,1751145-1751194,1751323-1751424,
1751794-1751871,1751999-1752028,1752322-1753050
Length = 637
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 194 NTTVLSGLTPLSIILKRHYAE-KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLN 370
+T L +T + +K H E ++ F P C++ HVD T L + K+ DL+
Sbjct: 191 DTAKLLQVTSMDRYVKYHVREFERAFAVKFPACSIAAKRHVDQSTTILDVSGVKLNFDLH 250
Query: 371 LAQKKGYADIDNAPEE 418
+ + GY + + A +
Sbjct: 251 VCE--GYKNFNKAARD 264
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,182,775
Number of Sequences: 37544
Number of extensions: 367938
Number of successful extensions: 648
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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