Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30565
         (457 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   2.1  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   2.1  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   4.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   8.4  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -1

Query: 166 IYYILYYEYKDIILQEEKNYNNVLFIKIYHFI 71
           +YY    EY   I+ E  N     ++KI +++
Sbjct: 270 LYYPHVPEYSSSIIMELHNIEGTHYVKIVYYL 301


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -1

Query: 166 IYYILYYEYKDIILQEEKNYNNVLFIKIYHFI 71
           +YY    EY   I+ E  N     ++KI +++
Sbjct: 285 LYYPHVPEYSSSIIMELHNIEGTHYVKIVYYL 316


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 97  LFIKIYHFIHTR 62
           LF+ I+HF H R
Sbjct: 290 LFVVIFHFAHPR 301


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 63  EPQK*HIGSFRSIYGASRY 7
           E +K  + +F S++GASR+
Sbjct: 117 ELKKLTVQTFNSVWGASRF 135


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,337
Number of Sequences: 438
Number of extensions: 2946
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)