Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30564
         (700 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   8.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.5  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   8.5  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 396 HQMLGLVTPARVFIK 440
           H  LGL+T A+ FIK
Sbjct: 84  HTTLGLLTKAKRFIK 98


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 6/37 (16%)
 Frame = -3

Query: 509 FQTFHSYIELHSLYITSVMIL------IPFYEDTCWR 417
           F+ FH+   L +    ++MI+      +P ++D CWR
Sbjct: 797 FEQFHNKELLWTSVKKALMIVGIRPERLPSFDDECWR 833


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 6/37 (16%)
 Frame = -3

Query: 509 FQTFHSYIELHSLYITSVMIL------IPFYEDTCWR 417
           F+ FH+   L +    ++MI+      +P ++D CWR
Sbjct: 835 FEQFHNKELLWTSVKKALMIVGIRPERLPSFDDECWR 871


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 96  NFRYKPVERDI*NINFQRNNAE*FAKSVNS 185
           NF       DI  +  +RNNA+ +  SVNS
Sbjct: 508 NFSKNNTIVDISKLVNKRNNAKIYTSSVNS 537


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,659
Number of Sequences: 438
Number of extensions: 3625
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)