Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30562
         (383 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075202-1|AAL68070.1|  117|Drosophila melanogaster AT14009p pro...    93   8e-20
AF143200-1|AAD32690.1|  117|Drosophila melanogaster vacuolar pro...    93   8e-20
AE014297-2689|AAF55686.1|  117|Drosophila melanogaster CG6213-PA...    93   8e-20

>AY075202-1|AAL68070.1|  117|Drosophila melanogaster AT14009p
           protein.
          Length = 117

 Score = 93.5 bits (222), Expect = 8e-20
 Identities = 44/94 (46%), Positives = 62/94 (65%)
 Frame = +1

Query: 100 KSARQGKRKAKRLKQAKEEAQDEVXXXXXXXXXXXXXXXAKHMGTREGVAXKIDAETKVK 279
           K A   KRKA+RLKQAK+EA +E+               AKHMG+REGVA KIDA+ +VK
Sbjct: 21  KVAEARKRKARRLKQAKDEATEEIEKFRQERERAFKEFEAKHMGSREGVAAKIDADIRVK 80

Query: 280 IEEMNKMVQTQKEAVIKDVLNLVYDXKPELHINY 381
           + +M++ +QT+K+  I ++L  VY+  PE+H NY
Sbjct: 81  LADMDRAIQTRKDPFILEILQYVYNISPEVHKNY 114



 Score = 50.4 bits (115), Expect = 8e-07
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = +3

Query: 39  MASQTQGIQQLLAAEKRAAEKVSEAR*AKSETPK 140
           MASQTQGIQQLLAAEK+AAEKV+EAR  K+   K
Sbjct: 1   MASQTQGIQQLLAAEKKAAEKVAEARKRKARRLK 34


>AF143200-1|AAD32690.1|  117|Drosophila melanogaster vacuolar
           proton-motive ATPasesubunit G VHA13 protein.
          Length = 117

 Score = 93.5 bits (222), Expect = 8e-20
 Identities = 44/94 (46%), Positives = 62/94 (65%)
 Frame = +1

Query: 100 KSARQGKRKAKRLKQAKEEAQDEVXXXXXXXXXXXXXXXAKHMGTREGVAXKIDAETKVK 279
           K A   KRKA+RLKQAK+EA +E+               AKHMG+REGVA KIDA+ +VK
Sbjct: 21  KVAEARKRKARRLKQAKDEATEEIEKFRQERERAFKEFEAKHMGSREGVAAKIDADIRVK 80

Query: 280 IEEMNKMVQTQKEAVIKDVLNLVYDXKPELHINY 381
           + +M++ +QT+K+  I ++L  VY+  PE+H NY
Sbjct: 81  LADMDRAIQTRKDPFILEILQYVYNISPEVHKNY 114



 Score = 50.4 bits (115), Expect = 8e-07
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = +3

Query: 39  MASQTQGIQQLLAAEKRAAEKVSEAR*AKSETPK 140
           MASQTQGIQQLLAAEK+AAEKV+EAR  K+   K
Sbjct: 1   MASQTQGIQQLLAAEKKAAEKVAEARKRKARRLK 34


>AE014297-2689|AAF55686.1|  117|Drosophila melanogaster CG6213-PA
           protein.
          Length = 117

 Score = 93.5 bits (222), Expect = 8e-20
 Identities = 44/94 (46%), Positives = 62/94 (65%)
 Frame = +1

Query: 100 KSARQGKRKAKRLKQAKEEAQDEVXXXXXXXXXXXXXXXAKHMGTREGVAXKIDAETKVK 279
           K A   KRKA+RLKQAK+EA +E+               AKHMG+REGVA KIDA+ +VK
Sbjct: 21  KVAEARKRKARRLKQAKDEATEEIEKFRQERERAFKEFEAKHMGSREGVAAKIDADIRVK 80

Query: 280 IEEMNKMVQTQKEAVIKDVLNLVYDXKPELHINY 381
           + +M++ +QT+K+  I ++L  VY+  PE+H NY
Sbjct: 81  LADMDRAIQTRKDPFILEILQYVYNISPEVHKNY 114



 Score = 50.4 bits (115), Expect = 8e-07
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = +3

Query: 39  MASQTQGIQQLLAAEKRAAEKVSEAR*AKSETPK 140
           MASQTQGIQQLLAAEK+AAEKV+EAR  K+   K
Sbjct: 1   MASQTQGIQQLLAAEKKAAEKVAEARKRKARRLK 34


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,214,815
Number of Sequences: 53049
Number of extensions: 238594
Number of successful extensions: 759
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)