Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30562
         (383 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88173-4|AAK21386.1|  126|Caenorhabditis elegans Vacuolar h atpa...    65   2e-11
U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical pr...    29   0.85 
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p...    27   3.4  
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p...    27   4.5  
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p...    27   4.5  
AF078789-3|AAK68487.1|  295|Caenorhabditis elegans Hypothetical ...    27   4.5  
AF078789-2|AAK21516.1|  318|Caenorhabditis elegans Hypothetical ...    27   4.5  
AC087232-1|AAK09079.2|  574|Caenorhabditis elegans Hypothetical ...    26   7.9  

>U88173-4|AAK21386.1|  126|Caenorhabditis elegans Vacuolar h atpase
           protein 10 protein.
          Length = 126

 Score = 64.9 bits (151), Expect = 2e-11
 Identities = 36/87 (41%), Positives = 49/87 (56%)
 Frame = +1

Query: 118 KRKAKRLKQAKEEAQDEVXXXXXXXXXXXXXXXAKHMGTREGVAXKIDAETKVKIEEMNK 297
           KRK +R KQAK+EAQ EV                +++GT+E +  KI  +T+ +I  M +
Sbjct: 27  KRKLQRTKQAKQEAQAEVEKYKQQREAEFKAFEQQYLGTKEDIESKIRRDTEDQISGMKQ 86

Query: 298 MVQTQKEAVIKDVLNLVYDXKPELHIN 378
            V   K+AVI  +L LV D KPELH N
Sbjct: 87  SVAGNKQAVIVRLLQLVCDIKPELHHN 113



 Score = 51.6 bits (118), Expect = 2e-07
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = +3

Query: 39  MASQTQGIQQLLAAEKRAAEKVSEAR*AKSETPK 140
           MASQTQGIQQLLAAEKRAAEK++EAR  K +  K
Sbjct: 1   MASQTQGIQQLLAAEKRAAEKINEARKRKLQRTK 34


>U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical
           protein F10D7.1 protein.
          Length = 656

 Score = 29.5 bits (63), Expect = 0.85
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +2

Query: 98  ESQRGKVSEKRNA*SRPRRRLKMKLKSTDRSVKGSSKNLKPSTWV 232
           E QR  +  K N   R +R +K + +STD+   GS K  +P+T V
Sbjct: 327 EFQRYLIETKENRSVRSKR-VKSEFQSTDKKRAGSEKQKRPATKV 370


>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
            protein C52B9.8 protein.
          Length = 1336

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 10/20 (50%), Positives = 17/20 (85%)
 Frame = +1

Query: 109  RQGKRKAKRLKQAKEEAQDE 168
            R+ +++AKRLK+ KEE +D+
Sbjct: 1278 RRARKEAKRLKRQKEEQEDD 1297


>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
           protein T07C4.10 protein.
          Length = 1013

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 283 EEMNKMVQTQKEAVIKDVLNLVYDXKPEL 369
           EE  +M    KE VI  +  LV+D KP+L
Sbjct: 124 EESRRMDLVDKENVIPVIPRLVFDEKPDL 152


>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
           protein T07C4.10 protein.
          Length = 1013

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 283 EEMNKMVQTQKEAVIKDVLNLVYDXKPEL 369
           EE  +M    KE VI  +  LV+D KP+L
Sbjct: 124 EESRRMDLVDKENVIPVIPRLVFDEKPDL 152


>AF078789-3|AAK68487.1|  295|Caenorhabditis elegans Hypothetical
           protein Y44E3B.1b protein.
          Length = 295

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 79  LKNALRRKSARQGKRKAKRLKQAKEEAQDEV 171
           LK A    + R+ + KAK L+  K+E  DE+
Sbjct: 233 LKRARNNDAVRKSRNKAKELQLQKDEEYDEM 263


>AF078789-2|AAK21516.1|  318|Caenorhabditis elegans Hypothetical
           protein Y44E3B.1a protein.
          Length = 318

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 79  LKNALRRKSARQGKRKAKRLKQAKEEAQDEV 171
           LK A    + R+ + KAK L+  K+E  DE+
Sbjct: 233 LKRARNNDAVRKSRNKAKELQLQKDEEYDEM 263


>AC087232-1|AAK09079.2|  574|Caenorhabditis elegans Hypothetical
           protein Y92H12BR.7 protein.
          Length = 574

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +1

Query: 232 TREGVAXKIDAETKVKIEEMNKMVQTQKEAVIKDVLNLVYD 354
           T + +A K+D E    ++ MNK V  +K A +  +   + D
Sbjct: 513 TAQELAEKLDPELVKAVDHMNKAVAREKNASMTSIFRNLND 553


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,617,273
Number of Sequences: 27780
Number of extensions: 115646
Number of successful extensions: 385
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)