Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30552
         (410 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5VMP6 Cluster: Putative uncharacterized protein OSJNBb...    33   2.3  
UniRef50_A7ATA4 Cluster: Phosphoenolpyruvate carboxylase, putati...    33   3.0  
UniRef50_A6CKM4 Cluster: Chitinase; n=1; Bacillus sp. SG-1|Rep: ...    32   4.0  

>UniRef50_Q5VMP6 Cluster: Putative uncharacterized protein
           OSJNBb0008D07.38; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBb0008D07.38 - Oryza sativa subsp. japonica (Rice)
          Length = 200

 Score = 33.1 bits (72), Expect = 2.3
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 371 DLSFGIX*TASWPSTNQCFFGNLCSLIYV 285
           D+ + +  TAS  +  QC FGN+C ++YV
Sbjct: 95  DIVYRVKCTASTATCEQCAFGNICEIVYV 123


>UniRef50_A7ATA4 Cluster: Phosphoenolpyruvate carboxylase, putative;
           n=1; Babesia bovis|Rep: Phosphoenolpyruvate carboxylase,
           putative - Babesia bovis
          Length = 954

 Score = 32.7 bits (71), Expect = 3.0
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -1

Query: 329 TNQCFFGNLCSLIYVALGHHSQQMVRIGFND 237
           T +C FGN C   Y+   H+S Q V IG++D
Sbjct: 588 TMKCLFGNPCYRDYLITYHNSTQEVMIGYSD 618


>UniRef50_A6CKM4 Cluster: Chitinase; n=1; Bacillus sp. SG-1|Rep:
           Chitinase - Bacillus sp. SG-1
          Length = 386

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 21/68 (30%), Positives = 28/68 (41%)
 Frame = +2

Query: 107 SFSGSFKKKYE*KNKNTVIVHSILSRYFAPVATML*TALSCQTHH*NQFSPSAGNDAQGQ 286
           S+S   KK  E   K+TV +  I   Y         T L+            AG+DA+G+
Sbjct: 301 SYSAVIKKGVENAGKDTVTIEGITYHYNGKDTIQRKTELALNNEFGGMMLWEAGHDARGE 360

Query: 287 HILTSTNS 310
           H LT   S
Sbjct: 361 HSLTKAIS 368


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 362,821,426
Number of Sequences: 1657284
Number of extensions: 6303409
Number of successful extensions: 15639
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15623
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18619342852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)