Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30552
         (410 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071291-1|AAL48913.1|  535|Drosophila melanogaster RE31829p pro...    29   2.4  
AE014297-1884|AAF55086.2|  535|Drosophila melanogaster CG7825-PA...    29   2.4  
AE014298-1457|AAN09261.3| 2309|Drosophila melanogaster CG17255-P...    28   4.2  
AE014298-1456|AAF46591.4| 2309|Drosophila melanogaster CG17255-P...    28   4.2  

>AY071291-1|AAL48913.1|  535|Drosophila melanogaster RE31829p
           protein.
          Length = 535

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -1

Query: 257 VRIGFNDVSGTTAPSTTLSRPARSTSTESNEQS 159
           VR  F++++ TT+P+ + S PA+ T + SN  S
Sbjct: 9   VRCAFSEMNLTTSPAPSESTPAKRTRSASNVSS 41


>AE014297-1884|AAF55086.2|  535|Drosophila melanogaster CG7825-PA
           protein.
          Length = 535

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -1

Query: 257 VRIGFNDVSGTTAPSTTLSRPARSTSTESNEQS 159
           VR  F++++ TT+P+ + S PA+ T + SN  S
Sbjct: 9   VRCAFSEMNLTTSPAPSESTPAKRTRSASNVSS 41


>AE014298-1457|AAN09261.3| 2309|Drosophila melanogaster CG17255-PB,
           isoform B protein.
          Length = 2309

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -1

Query: 278 GHHSQQMVRIGFNDVSGTTAPSTTLS-RPARSTSTESNEQSQ 156
           GHHS +  R G +DV G +A    LS RP   T+    +Q +
Sbjct: 343 GHHSHRDYRDGSDDVGGGSADLGELSLRPQNDTAAWLQQQEK 384


>AE014298-1456|AAF46591.4| 2309|Drosophila melanogaster CG17255-PA,
           isoform A protein.
          Length = 2309

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -1

Query: 278 GHHSQQMVRIGFNDVSGTTAPSTTLS-RPARSTSTESNEQSQ 156
           GHHS +  R G +DV G +A    LS RP   T+    +Q +
Sbjct: 343 GHHSHRDYRDGSDDVGGGSADLGELSLRPQNDTAAWLQQQEK 384


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,204,129
Number of Sequences: 53049
Number of extensions: 288208
Number of successful extensions: 727
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)