Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30549
(463 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92838-9|CAD30449.1| 549|Caenorhabditis elegans Hypothetical pr... 33 0.075
Z92838-8|CAB07407.1| 401|Caenorhabditis elegans Hypothetical pr... 33 0.075
Z92838-7|CAB07405.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.075
AF286206-1|AAK28741.1| 549|Caenorhabditis elegans C kinase adap... 33 0.075
AF286205-1|AAK28740.1| 593|Caenorhabditis elegans C kinase adap... 33 0.075
AF067214-9|AAC17004.1| 286|Caenorhabditis elegans Hypothetical ... 32 0.17
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.23
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 1.6
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 29 2.1
AY428645-1|AAR27937.1| 892|Caenorhabditis elegans microsomal tr... 28 2.8
AF045645-4|AAC02607.3| 892|Caenorhabditis elegans Defecation su... 28 2.8
Z81529-4|CAB04295.1| 272|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 28 3.7
AF025460-2|AAF02169.3| 545|Caenorhabditis elegans Prion-like-(q... 27 4.9
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 27 6.5
U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical p... 27 6.5
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 27 6.5
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 27 6.5
Z72518-1|CAA96699.2| 395|Caenorhabditis elegans Hypothetical pr... 27 8.6
U39678-5|ABP49528.1| 213|Caenorhabditis elegans Hypothetical pr... 27 8.6
U39678-4|AAK39211.2| 330|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z92838-9|CAD30449.1| 549|Caenorhabditis elegans Hypothetical
protein T03D8.1c protein.
Length = 549
Score = 33.5 bits (73), Expect = 0.075
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -2
Query: 333 PKRGRQRAYAPP-CPA--SVHNGGTSSLAQLLSGAGTSRSIRAQSAPAPDGR*GVLGHDS 163
PK G A+APP P +V NG S Q L A ++R+ +PA G+ + S
Sbjct: 470 PKSGPPPAHAPPPLPVRQAVSNGSPSIYQQQLQQANSTRN-----SPA-----GINWNSS 519
Query: 162 PSHQSLGKPPRRSVDP 115
P+ + +PP + VDP
Sbjct: 520 PNPMKISQPPAKPVDP 535
>Z92838-8|CAB07407.1| 401|Caenorhabditis elegans Hypothetical
protein T03D8.1b protein.
Length = 401
Score = 33.5 bits (73), Expect = 0.075
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -2
Query: 333 PKRGRQRAYAPP-CPA--SVHNGGTSSLAQLLSGAGTSRSIRAQSAPAPDGR*GVLGHDS 163
PK G A+APP P +V NG S Q L A ++R+ +PA G+ + S
Sbjct: 322 PKSGPPPAHAPPPLPVRQAVSNGSPSIYQQQLQQANSTRN-----SPA-----GINWNSS 371
Query: 162 PSHQSLGKPPRRSVDP 115
P+ + +PP + VDP
Sbjct: 372 PNPMKISQPPAKPVDP 387
>Z92838-7|CAB07405.1| 593|Caenorhabditis elegans Hypothetical
protein T03D8.1a protein.
Length = 593
Score = 33.5 bits (73), Expect = 0.075
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -2
Query: 333 PKRGRQRAYAPP-CPA--SVHNGGTSSLAQLLSGAGTSRSIRAQSAPAPDGR*GVLGHDS 163
PK G A+APP P +V NG S Q L A ++R+ +PA G+ + S
Sbjct: 514 PKSGPPPAHAPPPLPVRQAVSNGSPSIYQQQLQQANSTRN-----SPA-----GINWNSS 563
Query: 162 PSHQSLGKPPRRSVDP 115
P+ + +PP + VDP
Sbjct: 564 PNPMKISQPPAKPVDP 579
>AF286206-1|AAK28741.1| 549|Caenorhabditis elegans C kinase adapter
1s protein.
Length = 549
Score = 33.5 bits (73), Expect = 0.075
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -2
Query: 333 PKRGRQRAYAPP-CPA--SVHNGGTSSLAQLLSGAGTSRSIRAQSAPAPDGR*GVLGHDS 163
PK G A+APP P +V NG S Q L A ++R+ +PA G+ + S
Sbjct: 470 PKSGPPPAHAPPPLPVRQAVSNGSPSIYQQQLQQANSTRN-----SPA-----GINWNSS 519
Query: 162 PSHQSLGKPPRRSVDP 115
P+ + +PP + VDP
Sbjct: 520 PNPMKISQPPAKPVDP 535
>AF286205-1|AAK28740.1| 593|Caenorhabditis elegans C kinase adapter
1 protein.
Length = 593
Score = 33.5 bits (73), Expect = 0.075
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -2
Query: 333 PKRGRQRAYAPP-CPA--SVHNGGTSSLAQLLSGAGTSRSIRAQSAPAPDGR*GVLGHDS 163
PK G A+APP P +V NG S Q L A ++R+ +PA G+ + S
Sbjct: 514 PKSGPPPAHAPPPLPVRQAVSNGSPSIYQQQLQQANSTRN-----SPA-----GINWNSS 563
Query: 162 PSHQSLGKPPRRSVDP 115
P+ + +PP + VDP
Sbjct: 564 PNPMKISQPPAKPVDP 579
>AF067214-9|AAC17004.1| 286|Caenorhabditis elegans Hypothetical
protein F56C3.1 protein.
Length = 286
Score = 32.3 bits (70), Expect = 0.17
Identities = 22/65 (33%), Positives = 28/65 (43%)
Frame = -3
Query: 437 EHSLPXLVTAKHRRHDARQRQFRSYLCDQDTALHLPSGADSERMLRRVQLVSTMVAPRRW 258
E LP A+ RRH R R F L QD S + ++ + +TM RRW
Sbjct: 208 ETQLPPQSDAQLRRHIGRMRDFPRLLPKQDQQ----SSVGTSEVMSPMPPKNTMAQGRRW 263
Query: 257 LSSYP 243
SYP
Sbjct: 264 DMSYP 268
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.9 bits (69), Expect = 0.23
Identities = 24/90 (26%), Positives = 34/90 (37%)
Frame = -2
Query: 402 STPRRQAATIPVLSLRPGYGAAPPKRGRQRAYAPPCPASVHNGGTSSLAQLLSGAGTSRS 223
S P AA+ PV P PP++ +Q+ APP P + H+ +S+ Q G +
Sbjct: 238 SFPTSNAASPPVQEFAP----PPPQQQQQQFQAPPPPMASHSSISSTPVQ-QQGFAPPQQ 292
Query: 222 IRAQSAPAPDGR*GVLGHDSPSHQSLGKPP 133
P G Q G PP
Sbjct: 293 FGGPPPSGPPSEYGGYAPPQQQQQQFGAPP 322
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 405 ASTPRRQAATIPVLSLRPGYGAAPPKRGRQRAYAPP 298
A +P+ P +S PG A PP+ G A+APP
Sbjct: 358 APSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPP 393
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -2
Query: 411 RQASTPRRQAATIPVLSLRPGYGAAPPKRGRQRAYAPPCPA 289
+QAS P +QA PV P APPK Q+A PA
Sbjct: 285 QQASAPVQQAPPKPVPQQTPPVQQAPPKPAVQQAPTRAAPA 325
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 28.7 bits (61), Expect = 2.1
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -2
Query: 348 YGAAPPKRGRQRAYAPPCPASVHNGGTSSLAQLLSGAGTSRSIRAQSAP 202
YGA PP G YAPP P + + + GAG + S Q AP
Sbjct: 37 YGAPPPPVGAGVGYAPP-PPRPYGATYAPPPPMGIGAGVNPSGYVQQAP 84
>AY428645-1|AAR27937.1| 892|Caenorhabditis elegans microsomal
triglyceride transferprotein protein.
Length = 892
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -2
Query: 270 TSSLAQLLSGAGTSRSIRAQSAPAPDGR*GVLGHDSPSH 154
T L Q ++G+ +SRS AP R GV GH P+H
Sbjct: 676 TEHLEQFVTGSASSRS----GAPQGSVRIGVAGHKLPTH 710
>AF045645-4|AAC02607.3| 892|Caenorhabditis elegans Defecation
suppressor of clk-1protein 4 protein.
Length = 892
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -2
Query: 270 TSSLAQLLSGAGTSRSIRAQSAPAPDGR*GVLGHDSPSH 154
T L Q ++G+ +SRS AP R GV GH P+H
Sbjct: 676 TEHLEQFVTGSASSRS----GAPQGSVRIGVAGHKLPTH 710
>Z81529-4|CAB04295.1| 272|Caenorhabditis elegans Hypothetical
protein F35E8.6 protein.
Length = 272
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 337 CSAVSWSQR*DRNCRCLASWRRCLAVTSXGRLCSTSASAPS 459
C+AV+W ++NC+ + +RC A T+ T+ +AP+
Sbjct: 171 CNAVNWQDFVNKNCQ--KTCKRCPATTAAPAAGVTTTAAPA 209
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 27.9 bits (59), Expect = 3.7
Identities = 21/62 (33%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Frame = -2
Query: 354 PGYGAAPPKRGRQRAYAPPCPASVHN-GGTSSLAQLLSGAGTSRSIRAQSAPAPDGR*GV 178
PG GAA P + PCPA G A G + S A S P P G G
Sbjct: 135 PGKGAAVPCEAKTPPPCKPCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPSGP 194
Query: 177 LG 172
G
Sbjct: 195 AG 196
>AF025460-2|AAF02169.3| 545|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 41
protein.
Length = 545
Score = 27.5 bits (58), Expect = 4.9
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Frame = -2
Query: 426 SXTRHRQASTPRRQAATIPVLSLRPGYGAAPPKRGRQRAYAPPCPAS-------VHNGGT 268
S + H+++S P Q + P +APP R A+APP PAS G T
Sbjct: 63 SSSHHKKSSPPHHQKSAAP---------SAPP-RDVTSAHAPPPPASSAPIVGAPRQGAT 112
Query: 267 SSLAQLLSGAGTSRSIRAQSAPAP 196
A + A TS+ ++ + P P
Sbjct: 113 PQAAPATTPATTSQHQQSIATPKP 136
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.1 bits (57), Expect = 6.5
Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Frame = -2
Query: 411 RQASTPRRQAATIPVLSLR-PGYGAAP-PKRGRQRAYAPPCPASVHNGGTSSLAQLLSGA 238
R+ +P + P R P +P PKR + R+ +PP PA ++S + A
Sbjct: 303 RRRRSPSASKSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSP--PPA 360
Query: 237 GTSRSIRAQSAPAPDGR*GVLGHDSPSHQSLGKPPRRSVDPT 112
R++S PA R SPS PRR P+
Sbjct: 361 PKRAKSRSKSPPARRRR-------SPSASKSPPAPRRRRSPS 395
Score = 27.1 bits (57), Expect = 6.5
Identities = 35/114 (30%), Positives = 44/114 (38%), Gaps = 9/114 (7%)
Frame = -2
Query: 429 PSXTRHRQASTPRRQAAT--IPVLSLR--PGYGAAPP--KRGRQRAYAPPCPASVHNGGT 268
P+ R R S R A IP R P +PP KR + R+ +PP P
Sbjct: 386 PAPRRRRSPSKSRSPAPKREIPPARRRRSPSASKSPPAPKRAKSRSKSPPAPRR-----R 440
Query: 267 SSLAQLLSGAGTSRSIRAQSAPAPDGR*GVLGHDSPSHQSLGKP---PRRSVDP 115
S +Q S A R ++S AP R G S S + P PRR P
Sbjct: 441 RSPSQSKSPAPRRRRSPSKSPQAPRRRRSPSGSKSRSPRRRRSPAAAPRRRQSP 494
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 290 AGHGGAYARCLPRLGGAAPYPGRKDRTG 373
A GG A CLP G A PG+ R G
Sbjct: 91 ASAGGCDACCLPGAAGPAGTPGKPGRPG 118
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 290 AGHGGAYARCLPRLGGAAPYPGRKDRTG 373
A GG A CLP G A PG+ R G
Sbjct: 58 ASTGGCDACCLPGAAGPAGTPGKPGRPG 85
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 290 AGHGGAYARCLPRLGGAAPYPGRKDRTG 373
A GG A CLP G A PG+ R G
Sbjct: 91 ASAGGCDACCLPGAAGPAGTPGKPGRPG 118
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 290 AGHGGAYARCLPRLGGAAPYPGRKDRTG 373
A GG A CLP G A PG+ R G
Sbjct: 91 ASAGGCDACCLPGAAGPAGTPGKPGRPG 118
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 290 AGHGGAYARCLPRLGGAAPYPGRKDRTG 373
A GG A CLP G A PG+ R G
Sbjct: 91 ASAGGCDACCLPGAAGPAGTPGKPGRPG 118
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 290 AGHGGAYARCLPRLGGAAPYPGRKDRTG 373
A GG A CLP G A PG+ R G
Sbjct: 91 ASAGGCDACCLPGAAGPAGTPGKPGRPG 118
>U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical
protein C56C10.12 protein.
Length = 1599
Score = 27.1 bits (57), Expect = 6.5
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = -2
Query: 393 RRQAATIPVLSLR--PGYGAAPPKRGRQRAYAPPCP--ASVHNGGTSSLAQLLSGAGTS- 229
+R+ A+ P+ +R P A PP R Q APP P + + TS +A+ + T+
Sbjct: 69 KREEASEPLKDVRSSPVRPAPPPPRVSQEREAPPIPPRSMIFPRSTSMVAESRKESTTAV 128
Query: 228 ---RSIRAQSAPA 199
RS+ S PA
Sbjct: 129 APKRSVAVASYPA 141
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 290 AGHGGAYARCLPRLGGAAPYPGRKDRTG 373
A GG A CLP G A PG+ R G
Sbjct: 91 ASAGGCDACCLPGAAGPAGTPGKPGRPG 118
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 290 AGHGGAYARCLPRLGGAAPYPGRKDRTG 373
A GG A CLP G A PG+ R G
Sbjct: 91 ASAGGCDACCLPGAAGPAGTPGKPGRPG 118
>Z72518-1|CAA96699.2| 395|Caenorhabditis elegans Hypothetical
protein ZC374.1 protein.
Length = 395
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +3
Query: 195 LVQVLTGHGCFGKYLHRIGAEPTTRCHHCGH*LDTA 302
L ++ C +L+R G EP ++C +DTA
Sbjct: 283 LQAIIIASTCINPFLYRFGTEPKRNSYYCST-MDTA 317
>U39678-5|ABP49528.1| 213|Caenorhabditis elegans Hypothetical
protein C39D10.3b protein.
Length = 213
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 81 ESWSRRLANLTWGLRTVEAVYPDFDDWVNRGRERLTFRLV 200
E+ RR A+ T+ R +E V PD+D ER+T R +
Sbjct: 154 ETHPRRFADCTYH-RIIEEVTPDYDATCEEILERITSRKI 192
>U39678-4|AAK39211.2| 330|Caenorhabditis elegans Hypothetical
protein C39D10.3a protein.
Length = 330
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 81 ESWSRRLANLTWGLRTVEAVYPDFDDWVNRGRERLTFRLV 200
E+ RR A+ T+ R +E V PD+D ER+T R +
Sbjct: 271 ETHPRRFADCTYH-RIIEEVTPDYDATCEEILERITSRKI 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,580,174
Number of Sequences: 27780
Number of extensions: 256497
Number of successful extensions: 891
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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