BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30540 (564 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY058731-1|AAL13960.1| 360|Drosophila melanogaster LD47736p pro... 280 1e-75 AF002213-1|AAD00903.1| 360|Drosophila melanogaster sorbitol deh... 280 1e-75 AE014297-1226|AAF54573.1| 360|Drosophila melanogaster CG4649-PA... 280 1e-75 AF002212-1|AAD00902.1| 360|Drosophila melanogaster sorbitol deh... 274 7e-74 AE014297-536|AAF54080.1| 360|Drosophila melanogaster CG1982-PA ... 274 7e-74 AE001572-2|AAD19792.1| 360|Drosophila melanogaster sorbitol deh... 274 7e-74 AY052067-1|AAK93491.1| 360|Drosophila melanogaster LP12301p pro... 271 5e-73 AE014297-2744|AAN13816.2| 1214|Drosophila melanogaster CG4836-PB... 113 2e-25 AE014297-2743|AAF55731.2| 1217|Drosophila melanogaster CG4836-PC... 113 2e-25 U07799-1|AAA57187.1| 379|Drosophila melanogaster glutathione-de... 55 8e-08 U07641-1|AAB02520.1| 379|Drosophila melanogaster alcohol dehydr... 55 8e-08 AY089615-1|AAL90353.1| 379|Drosophila melanogaster RE29421p pro... 55 8e-08 AY089518-1|AAL90256.1| 379|Drosophila melanogaster GM08044p pro... 55 8e-08 AE014297-1224|AAF54571.1| 379|Drosophila melanogaster CG6598-PA... 55 8e-08 AE014297-2746|AAN13818.1| 130|Drosophila melanogaster CG31210-P... 33 0.20 BT021955-1|AAX51660.1| 325|Drosophila melanogaster AT25977p pro... 32 0.62 AE013599-1784|AAF58322.2| 357|Drosophila melanogaster CG16935-P... 32 0.62 BT023818-1|AAZ86739.1| 909|Drosophila melanogaster SD18573p pro... 30 1.9 AM262815-1|CAK18655.1| 1518|Drosophila melanogaster PP1 interact... 30 1.9 AE014297-3239|AAO41591.1| 1744|Drosophila melanogaster CG7029-PA... 30 1.9 AE014296-1693|AAF50239.2| 1937|Drosophila melanogaster CG3280-PA... 30 1.9 >AY058731-1|AAL13960.1| 360|Drosophila melanogaster LD47736p protein. Length = 360 Score = 280 bits (686), Expect = 1e-75 Identities = 125/163 (76%), Positives = 140/163 (85%) Frame = +2 Query: 71 MATDNLTALLYKPNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE 250 MATDNLTA+L+ DLRL Q PIPEI+DDEVLL MD VGICGSDVHY G+ G FVL + Sbjct: 1 MATDNLTAVLHGIEDLRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTK 60 Query: 251 PMIMGHEASGVVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPP 430 PMI+GHEA+GVVAK+G KV L VGDRVAIEPGVPCRYC+ CK GRY+LC DM+FCATPP Sbjct: 61 PMIIGHEAAGVVAKLGKKVTTLKVGDRVAIEPGVPCRYCDHCKQGRYNLCADMVFCATPP 120 Query: 431 VHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHACKR 559 GNL RYYKHAADFCFKLPDHV+MEEGALLEPL+VG+HAC+R Sbjct: 121 YDGNLTRYYKHAADFCFKLPDHVSMEEGALLEPLSVGVHACRR 163 >AF002213-1|AAD00903.1| 360|Drosophila melanogaster sorbitol dehydrogenase protein. Length = 360 Score = 280 bits (686), Expect = 1e-75 Identities = 125/163 (76%), Positives = 140/163 (85%) Frame = +2 Query: 71 MATDNLTALLYKPNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE 250 MATDNLTA+L+ DLRL Q PIPEI+DDEVLL MD VGICGSDVHY G+ G FVL + Sbjct: 1 MATDNLTAVLHGIEDLRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTK 60 Query: 251 PMIMGHEASGVVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPP 430 PMI+GHEA+GVVAK+G KV L VGDRVAIEPGVPCRYC+ CK GRY+LC DM+FCATPP Sbjct: 61 PMIIGHEAAGVVAKLGKKVTTLKVGDRVAIEPGVPCRYCDHCKQGRYNLCADMVFCATPP 120 Query: 431 VHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHACKR 559 GNL RYYKHAADFCFKLPDHV+MEEGALLEPL+VG+HAC+R Sbjct: 121 YDGNLTRYYKHAADFCFKLPDHVSMEEGALLEPLSVGVHACRR 163 >AE014297-1226|AAF54573.1| 360|Drosophila melanogaster CG4649-PA protein. Length = 360 Score = 280 bits (686), Expect = 1e-75 Identities = 125/163 (76%), Positives = 140/163 (85%) Frame = +2 Query: 71 MATDNLTALLYKPNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE 250 MATDNLTA+L+ DLRL Q PIPEI+DDEVLL MD VGICGSDVHY G+ G FVL + Sbjct: 1 MATDNLTAVLHGIEDLRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTK 60 Query: 251 PMIMGHEASGVVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPP 430 PMI+GHEA+GVVAK+G KV L VGDRVAIEPGVPCRYC+ CK GRY+LC DM+FCATPP Sbjct: 61 PMIIGHEAAGVVAKLGKKVTTLKVGDRVAIEPGVPCRYCDHCKQGRYNLCADMVFCATPP 120 Query: 431 VHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHACKR 559 GNL RYYKHAADFCFKLPDHV+MEEGALLEPL+VG+HAC+R Sbjct: 121 YDGNLTRYYKHAADFCFKLPDHVSMEEGALLEPLSVGVHACRR 163 >AF002212-1|AAD00902.1| 360|Drosophila melanogaster sorbitol dehydrogenase protein. Length = 360 Score = 274 bits (671), Expect = 7e-74 Identities = 122/163 (74%), Positives = 138/163 (84%) Frame = +2 Query: 71 MATDNLTALLYKPNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE 250 MA DNLTA+L+ D+RL Q PIPEI+DDEVLL MD VGICGSDVHY G+ G FVL + Sbjct: 1 MAKDNLTAVLHGIEDMRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTK 60 Query: 251 PMIMGHEASGVVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPP 430 PMI+GHE++GVVAK+G KV L VGDRVAIEPGVPCR C+ CK G+Y+LCP M+FCATPP Sbjct: 61 PMIIGHESAGVVAKLGKKVTTLKVGDRVAIEPGVPCRKCDHCKQGKYNLCPGMVFCATPP 120 Query: 431 VHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHACKR 559 GNL RYYKHAADFCFKLPDHVTMEEGALLEPL+VG+HACKR Sbjct: 121 YDGNLTRYYKHAADFCFKLPDHVTMEEGALLEPLSVGVHACKR 163 >AE014297-536|AAF54080.1| 360|Drosophila melanogaster CG1982-PA protein. Length = 360 Score = 274 bits (671), Expect = 7e-74 Identities = 122/163 (74%), Positives = 138/163 (84%) Frame = +2 Query: 71 MATDNLTALLYKPNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE 250 MA DNLTA+L+ D+RL Q PIPEI+DDEVLL MD VGICGSDVHY G+ G FVL + Sbjct: 1 MAKDNLTAVLHGIEDMRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTK 60 Query: 251 PMIMGHEASGVVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPP 430 PMI+GHE++GVVAK+G KV L VGDRVAIEPGVPCR C+ CK G+Y+LCP M+FCATPP Sbjct: 61 PMIIGHESAGVVAKLGKKVTTLKVGDRVAIEPGVPCRKCDHCKQGKYNLCPGMVFCATPP 120 Query: 431 VHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHACKR 559 GNL RYYKHAADFCFKLPDHVTMEEGALLEPL+VG+HACKR Sbjct: 121 YDGNLTRYYKHAADFCFKLPDHVTMEEGALLEPLSVGVHACKR 163 >AE001572-2|AAD19792.1| 360|Drosophila melanogaster sorbitol dehydrogenase protein. Length = 360 Score = 274 bits (671), Expect = 7e-74 Identities = 122/163 (74%), Positives = 138/163 (84%) Frame = +2 Query: 71 MATDNLTALLYKPNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE 250 MA DNLTA+L+ D+RL Q PIPEI+DDEVLL MD VGICGSDVHY G+ G FVL + Sbjct: 1 MAKDNLTAVLHGIEDMRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTK 60 Query: 251 PMIMGHEASGVVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPP 430 PMI+GHE++GVVAK+G KV L VGDRVAIEPGVPCR C+ CK G+Y+LCP M+FCATPP Sbjct: 61 PMIIGHESAGVVAKLGKKVTTLKVGDRVAIEPGVPCRKCDHCKQGKYNLCPGMVFCATPP 120 Query: 431 VHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHACKR 559 GNL RYYKHAADFCFKLPDHVTMEEGALLEPL+VG+HACKR Sbjct: 121 YDGNLTRYYKHAADFCFKLPDHVTMEEGALLEPLSVGVHACKR 163 >AY052067-1|AAK93491.1| 360|Drosophila melanogaster LP12301p protein. Length = 360 Score = 271 bits (664), Expect = 5e-73 Identities = 121/163 (74%), Positives = 137/163 (84%) Frame = +2 Query: 71 MATDNLTALLYKPNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE 250 MA DNLTA+L+ D+RL Q PIPEI+DDEVLL MD VGICGSDVHY G+ G FVL + Sbjct: 1 MAKDNLTAVLHGIEDMRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTK 60 Query: 251 PMIMGHEASGVVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPP 430 PMI+GHE++GVVAK+G KV VGDRVAIEPGVPCR C+ CK G+Y+LCP M+FCATPP Sbjct: 61 PMIIGHESAGVVAKLGKKVTTPKVGDRVAIEPGVPCRKCDHCKQGKYNLCPGMVFCATPP 120 Query: 431 VHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHACKR 559 GNL RYYKHAADFCFKLPDHVTMEEGALLEPL+VG+HACKR Sbjct: 121 YDGNLTRYYKHAADFCFKLPDHVTMEEGALLEPLSVGVHACKR 163 >AE014297-2744|AAN13816.2| 1214|Drosophila melanogaster CG4836-PB, isoform B protein. Length = 1214 Score = 113 bits (272), Expect = 2e-25 Identities = 56/156 (35%), Positives = 89/156 (57%) Frame = +2 Query: 86 LTALLYKPNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMG 265 LT + P ++ +V P D +VL+R V + SD+H ++ G E M +G Sbjct: 874 LTLRITNPYEISVVPFSKPRPKDFDVLIRTGSVAVSNSDIHVYENGNRDM----EAMSLG 929 Query: 266 HEASGVVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPPVHGNL 445 H+A+G+V ++G V++L VGDRV +E + C C+ CK G Y++C +++ +G L Sbjct: 930 HDATGIVEELGRCVQHLHVGDRVVMESALSCGICDLCKKGLYNMCSGLVY------NGFL 983 Query: 446 VRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHAC 553 Y H AD C +LP+ ++ME GAL + LA+G AC Sbjct: 984 STYQTHPADLCHRLPESISMEAGALTQTLALGCQAC 1019 >AE014297-2743|AAF55731.2| 1217|Drosophila melanogaster CG4836-PC, isoform C protein. Length = 1217 Score = 113 bits (272), Expect = 2e-25 Identities = 56/156 (35%), Positives = 89/156 (57%) Frame = +2 Query: 86 LTALLYKPNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMG 265 LT + P ++ +V P D +VL+R V + SD+H ++ G E M +G Sbjct: 877 LTLRITNPYEISVVPFSKPRPKDFDVLIRTGSVAVSNSDIHVYENGNRDM----EAMSLG 932 Query: 266 HEASGVVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPPVHGNL 445 H+A+G+V ++G V++L VGDRV +E + C C+ CK G Y++C +++ +G L Sbjct: 933 HDATGIVEELGRCVQHLHVGDRVVMESALSCGICDLCKKGLYNMCSGLVY------NGFL 986 Query: 446 VRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHAC 553 Y H AD C +LP+ ++ME GAL + LA+G AC Sbjct: 987 STYQTHPADLCHRLPESISMEAGALTQTLALGCQAC 1022 >U07799-1|AAA57187.1| 379|Drosophila melanogaster glutathione-dependent formaldehydedehydrogenase protein. Length = 379 Score = 54.8 bits (126), Expect = 8e-08 Identities = 26/81 (32%), Positives = 43/81 (53%) Frame = +2 Query: 158 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRVA 337 EV +++ G+C +D + G + P+++GHE +G+V +G V N GD V Sbjct: 37 EVRIKITATGVCHTDA-FTLSGADPEGLF--PVVLGHEGAGIVESVGEGVTNFKAGDHVI 93 Query: 338 IEPGVPCRYCEFCKTGRYHLC 400 C C+FCK+G+ +LC Sbjct: 94 ALYIPQCNECKFCKSGKTNLC 114 >U07641-1|AAB02520.1| 379|Drosophila melanogaster alcohol dehydrogenase protein. Length = 379 Score = 54.8 bits (126), Expect = 8e-08 Identities = 26/81 (32%), Positives = 43/81 (53%) Frame = +2 Query: 158 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRVA 337 EV +++ G+C +D + G + P+++GHE +G+V +G V N GD V Sbjct: 37 EVRIKITATGVCHTDA-FTLSGADPEGLF--PVVLGHEGAGIVESVGEGVTNFKAGDHVI 93 Query: 338 IEPGVPCRYCEFCKTGRYHLC 400 C C+FCK+G+ +LC Sbjct: 94 ALYIPQCNECKFCKSGKTNLC 114 >AY089615-1|AAL90353.1| 379|Drosophila melanogaster RE29421p protein. Length = 379 Score = 54.8 bits (126), Expect = 8e-08 Identities = 26/81 (32%), Positives = 43/81 (53%) Frame = +2 Query: 158 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRVA 337 EV +++ G+C +D + G + P+++GHE +G+V +G V N GD V Sbjct: 37 EVRIKITATGVCHTDA-FTLSGADPEGLF--PVVLGHEGAGIVESVGEGVTNFKAGDHVI 93 Query: 338 IEPGVPCRYCEFCKTGRYHLC 400 C C+FCK+G+ +LC Sbjct: 94 ALYIPQCNECKFCKSGKTNLC 114 >AY089518-1|AAL90256.1| 379|Drosophila melanogaster GM08044p protein. Length = 379 Score = 54.8 bits (126), Expect = 8e-08 Identities = 26/81 (32%), Positives = 43/81 (53%) Frame = +2 Query: 158 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRVA 337 EV +++ G+C +D + G + P+++GHE +G+V +G V N GD V Sbjct: 37 EVRIKITATGVCHTDA-FTLSGADPEGLF--PVVLGHEGAGIVESVGEGVTNFKAGDHVI 93 Query: 338 IEPGVPCRYCEFCKTGRYHLC 400 C C+FCK+G+ +LC Sbjct: 94 ALYIPQCNECKFCKSGKTNLC 114 >AE014297-1224|AAF54571.1| 379|Drosophila melanogaster CG6598-PA protein. Length = 379 Score = 54.8 bits (126), Expect = 8e-08 Identities = 26/81 (32%), Positives = 43/81 (53%) Frame = +2 Query: 158 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRVA 337 EV +++ G+C +D + G + P+++GHE +G+V +G V N GD V Sbjct: 37 EVRIKITATGVCHTDA-FTLSGADPEGLF--PVVLGHEGAGIVESVGEGVTNFKAGDHVI 93 Query: 338 IEPGVPCRYCEFCKTGRYHLC 400 C C+FCK+G+ +LC Sbjct: 94 ALYIPQCNECKFCKSGKTNLC 114 >AE014297-2746|AAN13818.1| 130|Drosophila melanogaster CG31210-PA protein. Length = 130 Score = 33.5 bits (73), Expect = 0.20 Identities = 17/39 (43%), Positives = 18/39 (46%) Frame = -1 Query: 390 YRPVLQNSQYRHGTPGSMATRSPTVRFLTFEPILATTPE 274 YRP L SQ SM TRSPT R T P P+ Sbjct: 3 YRPFLHRSQMPQDNADSMTTRSPTCRCWTHRPNQGVEPK 41 >BT021955-1|AAX51660.1| 325|Drosophila melanogaster AT25977p protein. Length = 325 Score = 31.9 bits (69), Expect = 0.62 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%) Frame = +2 Query: 116 LRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE--PMIMGHEASGVVA 289 L+LV+ +P+ D++VL+++ I +D++ Q G + ++ P + G+E V Sbjct: 38 LQLVEDKLPDPKDNQVLVKILAAPINPADINTIQ----GKYPVKPKFPAVGGNECVAEVI 93 Query: 290 KIGSKVKNLTVGDRV 334 +G KVK G V Sbjct: 94 CVGDKVKGFEAGQHV 108 >AE013599-1784|AAF58322.2| 357|Drosophila melanogaster CG16935-PA protein. Length = 357 Score = 31.9 bits (69), Expect = 0.62 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%) Frame = +2 Query: 116 LRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE--PMIMGHEASGVVA 289 L+LV+ +P+ D++VL+++ I +D++ Q G + ++ P + G+E V Sbjct: 38 LQLVEDKLPDPKDNQVLVKILAAPINPADINTIQ----GKYPVKPKFPAVGGNECVAEVI 93 Query: 290 KIGSKVKNLTVGDRV 334 +G KVK G V Sbjct: 94 CVGDKVKGFEAGQHV 108 >BT023818-1|AAZ86739.1| 909|Drosophila melanogaster SD18573p protein. Length = 909 Score = 30.3 bits (65), Expect = 1.9 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Frame = +1 Query: 403 RHDLLRHAPSTRKPRQILQARSR--FLLQAS*SRDHGRRSATGAP 531 RHD H P T PR+ L+ARS F + S G +AT +P Sbjct: 190 RHDEEEHYPDTETPRRQLRARSEAVFYDDVASSSSTGSLTATNSP 234 >AM262815-1|CAK18655.1| 1518|Drosophila melanogaster PP1 interacting 16 protein. Length = 1518 Score = 30.3 bits (65), Expect = 1.9 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Frame = +1 Query: 403 RHDLLRHAPSTRKPRQILQARSR--FLLQAS*SRDHGRRSATGAP 531 RHD H P T PR+ L+ARS F + S G +AT +P Sbjct: 799 RHDEEEHYPDTETPRRQLRARSEAVFYDDVASSSSTGSLTATNSP 843 >AE014297-3239|AAO41591.1| 1744|Drosophila melanogaster CG7029-PA protein. Length = 1744 Score = 30.3 bits (65), Expect = 1.9 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Frame = +1 Query: 403 RHDLLRHAPSTRKPRQILQARSR--FLLQAS*SRDHGRRSATGAP 531 RHD H P T PR+ L+ARS F + S G +AT +P Sbjct: 1025 RHDEEEHYPDTETPRRQLRARSEAVFYDDVASSSSTGSLTATNSP 1069 >AE014296-1693|AAF50239.2| 1937|Drosophila melanogaster CG3280-PA protein. Length = 1937 Score = 30.3 bits (65), Expect = 1.9 Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 3/96 (3%) Frame = +3 Query: 186 VSAGQMSTTGRRVNADTSCWKNQ*SWDTKLQE*WPRSVRKSRI*QLVI---EWP*SPACR 356 VSAGQ T VNA S W +W ++ PR+ R+ ++ EW R Sbjct: 912 VSAGQPRETTESVNATPSRWPF--NW-ASFRQTTPRTTTTRRVPSGILTKEEWERLRRLR 968 Query: 357 VGTASSVRQDDTTYAPT*SSAPRPQYTETSSDITST 464 G ++ TT T PR +Y T++++TST Sbjct: 969 -GRITTTTSTSTTSTTT--RRPRWRYRTTTTELTST 1001 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 27,857,023 Number of Sequences: 53049 Number of extensions: 622715 Number of successful extensions: 1625 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 1534 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1623 length of database: 24,988,368 effective HSP length: 81 effective length of database: 20,691,399 effective search space used: 2193288294 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -