Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30539
         (790 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    25   0.80 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    25   0.80 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   5.7  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   5.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   5.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   5.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   9.9  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = +3

Query: 378 ISINHNF-TANLL*VLTEKNSMAASFTKICISKQKIYIK--TLNERM 509
           + +N N+ T NL     +KNS    F K    K+  Y K   LN RM
Sbjct: 438 LRVNENYKTVNLAAEKKDKNSFFNMFKKFASLKKSPYFKEANLNTRM 484


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = +3

Query: 378 ISINHNF-TANLL*VLTEKNSMAASFTKICISKQKIYIK--TLNERM 509
           + +N N+ T NL     +KNS    F K    K+  Y K   LN RM
Sbjct: 438 LRVNENYKTVNLAAEKKDKNSFFNMFKKFASLKKSPYFKEANLNTRM 484


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 435 SMAASFTKICISKQKIYI 488
           S++A+ T +C+   KIYI
Sbjct: 745 SLSATVTLVCLYSPKIYI 762


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 186 NGCRTLQTETHYCFMAEISSAVLPCGLRRRPT 281
           NG   +Q ETH CF + +  A    G  R  T
Sbjct: 382 NGAELMQ-ETHVCFFSLLRDAFTSKGEYRMST 412


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 681 WVKIRRYYQGTSFYNISAIR 622
           WV++ +Y  G    N+SAI+
Sbjct: 555 WVRVGKYLSGELRLNMSAIQ 574


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 435 SMAASFTKICISKQKIYI 488
           S++A+ T +C+   KIYI
Sbjct: 835 SLSATVTLVCLYSPKIYI 852


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -3

Query: 131 MCKGSGNHLTPGGF*GCPP 75
           +CKG G    P G   C P
Sbjct: 233 LCKGDGKWYLPSGGCHCKP 251


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,027
Number of Sequences: 438
Number of extensions: 4307
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)