Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30516
         (552 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.2  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   9.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.5  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   9.5  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 115 LVA*VFSAIAAILWLKYCD 59
           L A V SAIA  L+L  CD
Sbjct: 5   LTACVGSAIAGFLFLLICD 23


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 296 VAHIASDKSGATENCGY 246
           +A  ASD    TENC Y
Sbjct: 58  LAFDASDPKFLTENCDY 74


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 296 VAHIASDKSGATENCGY 246
           +A  ASD    TENC Y
Sbjct: 58  LAFDASDPKFLTENCDY 74


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 339 LCMVKLTGYQFF 304
           +C+V L  YQFF
Sbjct: 22  VCLVPLNPYQFF 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,364
Number of Sequences: 336
Number of extensions: 2555
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)