Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30515
         (710 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0755 + 10932897-10933010,10933446-10933577,10933666-109337...    29   3.6  
09_06_0040 - 20432008-20432091,20432152-20432229,20432322-204329...    28   8.4  

>03_02_0755 +
           10932897-10933010,10933446-10933577,10933666-10933750,
           10934668-10934831,10934911-10935357
          Length = 313

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 518 WSFNLIGPKQLEFYGLIYH 574
           W F ++GP+  EF G IYH
Sbjct: 44  WQFAILGPRDSEFEGGIYH 62


>09_06_0040 -
           20432008-20432091,20432152-20432229,20432322-20432941,
           20433042-20433108,20433276-20433291,20433781-20433887,
           20433989-20434037,20435059-20435142,20435288-20435384,
           20435914-20435985,20436075-20436435,20437864-20438259
          Length = 676

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +3

Query: 270 KPTMETSLTSKSVSLITIEQTYILPLNFHYLEHLLESAS 386
           KPT +    ++ +S      TY+LP ++++ +H   S S
Sbjct: 609 KPTSKPLKATRKLSRCATSYTYVLPYSYNWSKHYASSQS 647


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,074,933
Number of Sequences: 37544
Number of extensions: 291782
Number of successful extensions: 454
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)