Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30515
         (710 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC150282-1|AAI50283.1| 1490|Homo sapiens WD repeat domain 7 prot...    30   9.4  
AY099325-1|AAM33134.1| 1490|Homo sapiens rabconnectin-3 beta pro...    30   9.4  
AF188125-1|AAL03983.1| 1457|Homo sapiens TGF-beta resistance-ass...    30   9.4  
AB011113-1|BAA25467.2| 1500|Homo sapiens KIAA0541 protein protein.     30   9.4  

>BC150282-1|AAI50283.1| 1490|Homo sapiens WD repeat domain 7
           protein.
          Length = 1490

 Score = 29.9 bits (64), Expect = 9.4
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -3

Query: 300 LRSTTFP*WVSGRMFFMSLRLRNSFVCAFIVYGVLSIWIAEKKAS 166
           L S   P W+S      S R +   V A  V G+L +WI   + S
Sbjct: 152 LVSKISPDWISSMSIIRSHRTQEDTVVALSVTGILKVWIVTSEIS 196


>AY099325-1|AAM33134.1| 1490|Homo sapiens rabconnectin-3 beta
           protein.
          Length = 1490

 Score = 29.9 bits (64), Expect = 9.4
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -3

Query: 300 LRSTTFP*WVSGRMFFMSLRLRNSFVCAFIVYGVLSIWIAEKKAS 166
           L S   P W+S      S R +   V A  V G+L +WI   + S
Sbjct: 152 LVSKISPDWISSMSIIRSHRTQEDTVVALSVTGILKVWIVTSEIS 196


>AF188125-1|AAL03983.1| 1457|Homo sapiens TGF-beta
           resistance-associated protein TRAG protein.
          Length = 1457

 Score = 29.9 bits (64), Expect = 9.4
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -3

Query: 300 LRSTTFP*WVSGRMFFMSLRLRNSFVCAFIVYGVLSIWIAEKKAS 166
           L S   P W+S      S R +   V A  V G+L +WI   + S
Sbjct: 152 LVSKISPDWISSMSIIRSHRTQEDTVVALSVTGILKVWIVTSEIS 196


>AB011113-1|BAA25467.2| 1500|Homo sapiens KIAA0541 protein protein.
          Length = 1500

 Score = 29.9 bits (64), Expect = 9.4
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -3

Query: 300 LRSTTFP*WVSGRMFFMSLRLRNSFVCAFIVYGVLSIWIAEKKAS 166
           L S   P W+S      S R +   V A  V G+L +WI   + S
Sbjct: 162 LVSKISPDWISSMSIIRSHRTQEDTVVALSVTGILKVWIVTSEIS 206


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,161,425
Number of Sequences: 237096
Number of extensions: 1801263
Number of successful extensions: 2402
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2402
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)