Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30514
(740 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 26 0.32
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 24 1.7
DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein. 22 5.3
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 5.3
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 7.0
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 7.0
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 7.0
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 7.0
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 7.0
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 7.0
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 7.0
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 7.0
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 7.0
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 7.0
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 7.0
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 7.0
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 7.0
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 7.0
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 7.0
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 7.0
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 7.0
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 7.0
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 7.0
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 7.0
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 7.0
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 7.0
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 7.0
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 7.0
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 7.0
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 7.0
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 7.0
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 7.0
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 9.2
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 9.2
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 9.2
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 26.2 bits (55), Expect = 0.32
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 243 SVTYGVVVTTESACYMDI 296
SVTYG+ TT AC MD+
Sbjct: 148 SVTYGMRFTTTLACMMDL 165
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.7
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP +FPR
Sbjct: 140 RFRHIGPSTLFPR 152
>DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein.
Length = 143
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/40 (22%), Positives = 21/40 (52%)
Frame = -1
Query: 407 IDSVVPASYNKSLITSLDSCS*VTKSRQTGRFFALISYIH 288
+ V+P ++ + + +DSCS V S + + F + ++
Sbjct: 94 LKKVIPEAFKEIGVEMIDSCSNVDSSDKCEKSFMFMKCMY 133
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 5.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 374 RFRHIGPSTSFPR 386
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 140 RFRHIGPSTPFPR 152
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 140 RFRHIGPSTPFPR 152
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 140 RFRHIGPSTPFPR 152
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 140 RFRHIGPSTPFPR 152
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 140 RFRHIGPSTPFPR 152
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 151 RFRHIGPSTPFPR 163
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 151 RFRHIGPSTPFPR 163
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 151 RFRHIGPSTPFPR 163
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 151 RFRHIGPSTPFPR 163
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 143 RFRHIGPSTPFPR 155
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 143 RFRHIGPSTPFPR 155
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 143 RFRHIGPSTPFPR 155
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 143 RFRHIGPSTPFPR 155
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 148 RFRHIGPSTPFPR 160
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 149 RFRHIGPSTPFPR 161
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 149 RFRHIGPSTPFPR 161
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 149 RFRHIGPSTPFPR 161
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 149 RFRHIGPSTPFPR 161
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 149 RFRHIGPSTPFPR 161
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 149 RFRHIGPSTPFPR 161
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 149 RFRHIGPSTPFPR 161
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 146 RFRHIGPSTPFPR 158
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 146 RFRHIGPSTPFPR 158
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 146 RFRHIGPSTPFPR 158
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 146 RFRHIGPSTPFPR 158
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 152 RFRHIGPSTPFPR 164
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 391 RFRHIGPSTPFPR 403
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 376 RFRHIGPSTPFPR 388
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 144 RFRHIGPLTPFPR 156
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 372 RFRHIGPPTPFPR 384
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 44 RYTHLGPRVIFPR 6
R+ H+GP FPR
Sbjct: 385 RFRHIGPLTPFPR 397
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,505
Number of Sequences: 438
Number of extensions: 2766
Number of successful extensions: 38
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -