Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30509
         (460 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55D52 Cluster: PREDICTED: hypothetical protein;...    37   0.18 
UniRef50_A5DT94 Cluster: Putative uncharacterized protein; n=1; ...    36   0.32 
UniRef50_Q5BI62 Cluster: LP14331p; n=3; Fungi/Metazoa group|Rep:...    35   0.97 
UniRef50_UPI0000F2E6A6 Cluster: PREDICTED: similar to gag-protea...    31   9.0  
UniRef50_Q7S7G6 Cluster: Putative uncharacterized protein NCU014...    31   9.0  
UniRef50_Q8RIQ1 Cluster: UDP-N-acetylglucosamine 1-carboxyvinylt...    31   9.0  

>UniRef50_UPI0000D55D52 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 481

 Score = 37.1 bits (82), Expect = 0.18
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +3

Query: 162 RGKSSTWDT*WINYLLSLVNVGLPVACLQKL*LFHLMQYYKTV 290
           R  S  WDT W N L  + N+   + CLQ++   HL QY+ T+
Sbjct: 141 RKDSLKWDTRWNNLLAEIRNLNPDILCLQEVQNTHLDQYFSTL 183


>UniRef50_A5DT94 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 584

 Score = 36.3 bits (80), Expect = 0.32
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -3

Query: 158 RIEVASNA*NYNTTTLPRLRYIQFCLHVLRTVRARFNMK 42
           R   ASN+ N + T++   + +QFC+H+LR   A  N K
Sbjct: 286 RFSTASNSSNTSITSIDVKKRLQFCIHILRAANANINSK 324


>UniRef50_Q5BI62 Cluster: LP14331p; n=3; Fungi/Metazoa group|Rep:
            LP14331p - Drosophila melanogaster (Fruit fly)
          Length = 1313

 Score = 34.7 bits (76), Expect = 0.97
 Identities = 23/79 (29%), Positives = 39/79 (49%)
 Frame = +2

Query: 92   GCIAALAKSWCYNFMHYLLPQYGTWXVKHVGHLMDQLFIVAC*RRPTSGLLTKALAFSSH 271
            G +  LA+S  + F +     YGTW V H G L   +F V+      +  +  ALAF+ +
Sbjct: 974  GLVYGLARSLMF-FAYAACMYYGTWCVIHRGILFGDVFKVSQALIMGTASIANALAFAPN 1032

Query: 272  AILQNGFNETVTLYDLVRK 328
              +Q G +   T++  +R+
Sbjct: 1033 --MQKGVSAAKTIFTFLRR 1049


>UniRef50_UPI0000F2E6A6 Cluster: PREDICTED: similar to gag-protease;
           n=1; Monodelphis domestica|Rep: PREDICTED: similar to
           gag-protease - Monodelphis domestica
          Length = 457

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +3

Query: 36  TLLHVKPSTDSSQNM*TKLDVSQPWQSRGVIISCITCYLNTARGKSSTW 182
           TLL  KPS  +++    KL + QP +     ISC   YL+ + G S +W
Sbjct: 374 TLLEGKPSATTAKTKLPKLTIPQPSE-----ISCTCDYLHLSNGPSPSW 417


>UniRef50_Q7S7G6 Cluster: Putative uncharacterized protein
           NCU01409.1; n=1; Neurospora crassa|Rep: Putative
           uncharacterized protein NCU01409.1 - Neurospora crassa
          Length = 721

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = +2

Query: 170 VKHVGHLMDQLFIVAC*RRPTSGLLTKALAFSSHAILQNGFNETVTLYDLVRK 328
           VK V HL+D    VA      S +LT +L  SS A L+N + +T  L + +RK
Sbjct: 647 VKEVAHLLDGKGRVAVAEELNSAILT-SLGKSSRAALENLYAQTTVLLEDLRK 698


>UniRef50_Q8RIQ1 Cluster: UDP-N-acetylglucosamine
           1-carboxyvinyltransferase; n=6; Bacteria|Rep:
           UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
           Fusobacterium nucleatum subsp. nucleatum
          Length = 423

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 20/62 (32%), Positives = 34/62 (54%)
 Frame = +2

Query: 146 LPQYGTWXVKHVGHLMDQLFIVAC*RRPTSGLLTKALAFSSHAILQNGFNETVTLYDLVR 325
           L + GT+ +++V  L D   +VA     + GL  + L  +S+ I+ NG +     YDLV+
Sbjct: 34  LVEKGTYVLRNVPDLRDIRTLVAL--LESLGLEVEKLDANSYKIINNGLSGAEASYDLVK 91

Query: 326 KV 331
           K+
Sbjct: 92  KM 93


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,634,988
Number of Sequences: 1657284
Number of extensions: 7654167
Number of successful extensions: 14548
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14545
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)