Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30509
         (460 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   3.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   4.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   4.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.5  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    20   9.6  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    20   9.6  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 235 WLAYKSSSFFISCNI 279
           W +YK +  FI+C +
Sbjct: 124 WKSYKRTQIFITCEL 138


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 140 YLLPQYGTW 166
           YL+P+ GTW
Sbjct: 129 YLIPEVGTW 137


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 140 YLLPQYGTW 166
           YL+P+ GTW
Sbjct: 129 YLIPEVGTW 137


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 153 NTARGKSSTWDT*WIN 200
           N+A  + S W + W+N
Sbjct: 353 NSASNRHSAWQSHWLN 368


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 125 YNFMHYLLPQYGTWXVKHVGHLMDQLFIV 211
           Y  +H++  + G   V H GH + +  IV
Sbjct: 375 YPSVHFISRKLGEDLVTHSGHKLAKASIV 403


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 55  RARTVRRTCKQN 90
           RAR + RTC+ N
Sbjct: 243 RARPLARTCRDN 254


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,062
Number of Sequences: 336
Number of extensions: 2149
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)