Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30509
         (460 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021362-1|AAX33510.1| 1313|Drosophila melanogaster LP14331p pro...    35   0.060
AE013599-1857|AAF58271.3| 1313|Drosophila melanogaster CG8523-PA...    35   0.060
L07065-1|AAA16186.1| 1283|Drosophila melanogaster P-glycoprotein...    34   0.080

>BT021362-1|AAX33510.1| 1313|Drosophila melanogaster LP14331p protein.
          Length = 1313

 Score = 34.7 bits (76), Expect = 0.060
 Identities = 23/79 (29%), Positives = 39/79 (49%)
 Frame = +2

Query: 92   GCIAALAKSWCYNFMHYLLPQYGTWXVKHVGHLMDQLFIVAC*RRPTSGLLTKALAFSSH 271
            G +  LA+S  + F +     YGTW V H G L   +F V+      +  +  ALAF+ +
Sbjct: 974  GLVYGLARSLMF-FAYAACMYYGTWCVIHRGILFGDVFKVSQALIMGTASIANALAFAPN 1032

Query: 272  AILQNGFNETVTLYDLVRK 328
              +Q G +   T++  +R+
Sbjct: 1033 --MQKGVSAAKTIFTFLRR 1049


>AE013599-1857|AAF58271.3| 1313|Drosophila melanogaster CG8523-PA
            protein.
          Length = 1313

 Score = 34.7 bits (76), Expect = 0.060
 Identities = 23/79 (29%), Positives = 39/79 (49%)
 Frame = +2

Query: 92   GCIAALAKSWCYNFMHYLLPQYGTWXVKHVGHLMDQLFIVAC*RRPTSGLLTKALAFSSH 271
            G +  LA+S  + F +     YGTW V H G L   +F V+      +  +  ALAF+ +
Sbjct: 974  GLVYGLARSLMF-FAYAACMYYGTWCVIHRGILFGDVFKVSQALIMGTASIANALAFAPN 1032

Query: 272  AILQNGFNETVTLYDLVRK 328
              +Q G +   T++  +R+
Sbjct: 1033 --MQKGVSAAKTIFTFLRR 1049


>L07065-1|AAA16186.1| 1283|Drosophila melanogaster
            P-glycoprotein/multidrug resistanceprotein protein.
          Length = 1283

 Score = 34.3 bits (75), Expect = 0.080
 Identities = 23/79 (29%), Positives = 39/79 (49%)
 Frame = +2

Query: 92   GCIAALAKSWCYNFMHYLLPQYGTWXVKHVGHLMDQLFIVAC*RRPTSGLLTKALAFSSH 271
            G +  LA+S  + F +     YGTW V H G L   +F V+      +  +  ALAF+ +
Sbjct: 944  GLVYGLARSLMF-FAYAACMYYGTWCVIHRGILFGDVFKVSQAVIMGTASIANALAFAPN 1002

Query: 272  AILQNGFNETVTLYDLVRK 328
              +Q G +   T++  +R+
Sbjct: 1003 --MQKGVSAAKTIFTFLRR 1019


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,799,563
Number of Sequences: 53049
Number of extensions: 357660
Number of successful extensions: 802
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)