Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30509
         (460 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78414-1|CAB01669.2|  472|Caenorhabditis elegans Hypothetical pr...    30   0.93 
Z48009-8|CAA88081.1|  329|Caenorhabditis elegans Hypothetical pr...    29   2.1  

>Z78414-1|CAB01669.2|  472|Caenorhabditis elegans Hypothetical
           protein W09D12.1 protein.
          Length = 472

 Score = 29.9 bits (64), Expect = 0.93
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 199 LIHQVSHVLDXPRAVLR*QVMHEIITPRL 113
           L+H++ H+L  P    R  +MH I  P L
Sbjct: 218 LLHEIGHILGLPHTFYRGSIMHPIFKPVL 246


>Z48009-8|CAA88081.1|  329|Caenorhabditis elegans Hypothetical
           protein AH6.11 protein.
          Length = 329

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 22/71 (30%), Positives = 32/71 (45%)
 Frame = +3

Query: 120 GVIISCITCYLNTARGKSSTWDT*WINYLLSLVNVGLPVACLQKL*LFHLMQYYKTVSMK 299
           G+ IS    +L+   GK   WD     YLLS V+   P   +++  LF     Y  +S  
Sbjct: 144 GIAISIAILFLSLITGKIIIWDDPLQGYLLSCVS--YPSQSVERSRLF--ASIYTFISSF 199

Query: 300 LSLFMISLERY 332
             +F + L RY
Sbjct: 200 NLVFSVLLRRY 210


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,939,381
Number of Sequences: 27780
Number of extensions: 194095
Number of successful extensions: 346
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 346
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)