Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30509
         (460 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g79710.1 68414.m09296 integral membrane transporter family pr...    27   4.6  
At1g18310.1 68414.m02288 glycosyl hydrolase family 81 protein si...    27   4.6  

>At1g79710.1 68414.m09296 integral membrane transporter family
           protein similar to high affinity folic acid/methotrexate
           transporter 5 (GI:21898554) [Leishmania tarentolae];
           Interpro IPR001991/ PR00173 Sodium:dicarboxylater
           symporter family
          Length = 497

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 8/19 (42%), Positives = 16/19 (84%)
 Frame = -3

Query: 386 IRGYVVMLSTVVVWLHTSI 330
           + G++ M+S +V+WLHT++
Sbjct: 124 LAGFLAMISMMVLWLHTNL 142


>At1g18310.1 68414.m02288 glycosyl hydrolase family 81 protein
           similar to beta-glucan binding protein GI:6625560 from
           [Phaseolus vulgaris]
          Length = 649

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 178 RGTPDGSTIYCRLLTSAYQWLAYKSS 255
           RG+P  ST +   LT+  +WL Y SS
Sbjct: 129 RGSPSSSTKWSDKLTNNQRWLIYASS 154


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,162,187
Number of Sequences: 28952
Number of extensions: 173428
Number of successful extensions: 340
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 340
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 762235320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)