Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30503
(409 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 143 8e-36
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 142 2e-35
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 141 3e-35
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 134 5e-33
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 128 2e-31
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 125 3e-30
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 73 1e-14
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 73 2e-14
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 68 6e-13
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 66 1e-12
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 66 3e-12
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 65 3e-12
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 64 6e-12
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 64 1e-11
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 63 1e-11
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 60 1e-10
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 55 4e-09
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 48 4e-07
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 34 0.010
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 33 0.013
SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces po... 28 0.64
SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces pom... 27 0.85
SPBC4C3.03 |||homoserine kinase |Schizosaccharomyces pombe|chr 2... 27 0.85
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 0.85
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 26 2.6
SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit S... 25 3.4
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 25 3.4
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 24 7.9
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 143 bits (347), Expect = 8e-36
Identities = 62/107 (57%), Positives = 78/107 (72%)
Frame = +3
Query: 87 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 266
M T R K+ +VGDG GKTCLL V+++ FPE YVPTVF+NYV + VDG VE+ALWD
Sbjct: 1 MATELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWD 60
Query: 267 TAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF 407
TAGQEDY+RLRPLSY ++ L+C++V S S +NV KW E+ HF
Sbjct: 61 TAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHF 107
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 142 bits (343), Expect = 2e-35
Identities = 61/107 (57%), Positives = 78/107 (72%)
Frame = +3
Query: 87 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 266
M T R K+ +VGDG GKTCLL V+++ FPE YVPTVF+NYV + VDG +E+ALWD
Sbjct: 1 MTTELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWD 60
Query: 267 TAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF 407
TAGQEDY+RLRPLSY ++ L+C+SV + S +NV KW E+ HF
Sbjct: 61 TAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHF 107
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 141 bits (342), Expect = 3e-35
Identities = 62/100 (62%), Positives = 76/100 (76%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQED 284
+K VVGDG VGKTCLL YT N+FP +YVPTVFDNY + + E + L+DTAGQED
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQED 63
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKH 404
Y+RLRPLSY QT+ FLVC+SV S +S+ENV KW+PE+ H
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHH 103
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 134 bits (324), Expect = 5e-33
Identities = 58/102 (56%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITV--DGEDVEMALWDTAGQE 281
K+ VVGDG GKTCLL V++ FPE YVPTVF+NY+ IT + + +E+ALWDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF 407
+Y+RLRPLSY +N L+C+S+ +S NV KWYPE++HF
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHF 117
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 128 bits (310), Expect = 2e-31
Identities = 52/97 (53%), Positives = 74/97 (76%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDY 287
KI ++GDG GKT LL V+T+ FP+ Y PT+F+NY+ I VDG +E++LWDTAGQE+Y
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEY 74
Query: 288 ERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL 398
++LR LSY+ T+ ++C++V SR S ENV+ KW PE+
Sbjct: 75 DQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEV 111
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 125 bits (301), Expect = 3e-30
Identities = 57/99 (57%), Positives = 71/99 (71%)
Frame = +3
Query: 102 RLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQE 281
R K+ VVGDG GKT LL V+T FP EYVPTVF+NYV VDG+ V++ALWDTAGQE
Sbjct: 8 RRKLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQE 67
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL 398
+YERLRP+SY + + LV +++ S S ENV KW E+
Sbjct: 68 EYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEI 106
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 73.3 bits (172), Expect = 1e-14
Identities = 35/92 (38%), Positives = 54/92 (58%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
+ K+ VVGDG VGK+ L ++ F +EY PT+ D+Y +DGE + + DTAGQ
Sbjct: 7 REYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAGQ 66
Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENV 374
E+Y +R FL+ Y++ SRSS++ +
Sbjct: 67 EEYSAMREQYMRTGEGFLLVYNITSRSSFDEI 98
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 72.5 bits (170), Expect = 2e-14
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Frame = +3
Query: 87 MGTTKR--LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMA 257
M KR LK+ ++GD VGKTCL+ + +F EY T+ +++ + VD + V +
Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQ 60
Query: 258 LWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPE 395
LWDTAGQE ++ L Y +C ++ Y+V + S+++ V W E
Sbjct: 61 LWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDS-VENWRQE 105
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 67.7 bits (158), Expect = 6e-13
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQE 281
+K+ ++GD VGK+CLL ++ + F ++ T+ D + I +DG+ +++ +WDTAGQE
Sbjct: 10 IKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 69
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK 401
+ + Y L+ Y V + S++N V W+ ++
Sbjct: 70 RFRTITTAYYRGAMGILLLYDVTDKKSFDN-VRTWFSNVE 108
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 66.5 bits (155), Expect = 1e-12
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
K+ ++GD VGK+CLL + + + E Y+ T+ D + ++G+ V++ +WDTAGQE
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQER 69
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF 407
+ + Y + ++ Y V + S+ N V +W E+ +
Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDQDSFNN-VKQWLQEIDRY 109
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 65.7 bits (153), Expect = 3e-12
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVG-HITVDGEDVEMALWDTAGQED 284
K ++GD VGK+ LL +TRNEF E T+ + +I +D + ++ +WDTAGQE
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK 401
Y + Y L+ Y + +SS++N V +W EL+
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDN-VGRWLKELR 109
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 65.3 bits (152), Expect = 3e-12
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
K+ +VGDG GKT + + EF ++Y+ T+ + + H + ++ +WDTAGQE
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEK 70
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKW 386
LR Y Q C ++ + V SR +Y+NV H W
Sbjct: 71 LGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWW 104
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 64.5 bits (150), Expect = 6e-12
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVG-HITVDGEDVEMALWDTAGQE 281
LK+ ++G+ VGKT ++ Y +F ++Y T+ +++ + VD + V + LWDTAGQE
Sbjct: 9 LKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQE 68
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPE 395
++ L Y +C ++ Y V + S+E + W E
Sbjct: 69 RFQSLGVAFYRGADCCVLVYDVNNSKSFE-TLDSWRDE 105
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 63.7 bits (148), Expect = 1e-11
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Frame = +3
Query: 66 SDVAARTMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVD-G 239
S+ A + + T + K+ ++GD VGK+ L+ + +++F + T+ ++ + +D
Sbjct: 3 SNTAPKNVVTINQ-KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDEN 61
Query: 240 EDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK 401
V++ +WDTAGQE Y+ L P+ Y NC +V Y + +S E W EL+
Sbjct: 62 TSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEK-AKSWIKELQ 114
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 63.3 bits (147), Expect = 1e-11
Identities = 32/96 (33%), Positives = 51/96 (53%)
Frame = +3
Query: 87 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 266
M K +I V+G VGK+ L Y N F E Y PT+ + + +I G++ + D
Sbjct: 1 MAPIKSRRIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIID 60
Query: 267 TAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENV 374
TAGQ++Y L + +++ YS+ S+SS+E V
Sbjct: 61 TAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMV 96
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 60.1 bits (139), Expect = 1e-10
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMALWDTAGQE 281
+K+ ++GD +GKT L+ Y + F EE T+ N++ I++ ++ ++WD GQ
Sbjct: 11 IKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQR 70
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF 407
++ + P+ L + + SR S N + +WY + + F
Sbjct: 71 EFVNMLPMVCNDAVAILFMFDL-SRKSTLNSIKEWYRQARGF 111
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 55.2 bits (127), Expect = 4e-09
Identities = 26/102 (25%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMALWDTAG 275
++ K+ +G+ VGKT L+ + ++F Y T+ +++ + ++ V + LWDTAG
Sbjct: 10 RKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 69
Query: 276 QEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK 401
QE + L P ++ ++ Y + + +S+ N KW +++
Sbjct: 70 QERFRSLIPSYIRDSSVAIIVYDITNHNSFVN-TEKWIEDVR 110
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 48.4 bits (110), Expect = 4e-07
Identities = 26/104 (25%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDG-----EDVEMALWDT 269
+KI + G GK+CLL + +N++ ++ TV ++ I G + +++ +WDT
Sbjct: 10 VKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDT 69
Query: 270 AGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK 401
AGQE + + Y ++ Y V ++ S+E + W +++
Sbjct: 70 AGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEE-LSSWLSDIR 112
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 33.9 bits (74), Expect = 0.010
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
+ ++I +VG GKT +LY E +PT+ N TV+ ++ +WD GQ
Sbjct: 16 REMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYRNISFTVWDVGGQ 71
Query: 279 EDYERLRPL 305
+++RPL
Sbjct: 72 ---DKIRPL 77
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 33.5 bits (73), Expect = 0.013
Identities = 22/71 (30%), Positives = 38/71 (53%)
Frame = +3
Query: 93 TTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTA 272
+ K ++I ++G GKT +LY N+ +PTV N TV ++++ +WD
Sbjct: 18 SNKEMRILMLGLDAAGKTTILYKLKLNQ-SVVTIPTVGFNVE---TVTYKNIKFNVWDVG 73
Query: 273 GQEDYERLRPL 305
GQ +++RPL
Sbjct: 74 GQ---DKIRPL 81
>SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 981
Score = 27.9 bits (59), Expect = 0.64
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +3
Query: 3 IIFKCLYNRVLKR-----EFCGDIGLSDVAARTMGTTKRLKITVVGDGMVGKTCLLY 158
I+ K Y +L+R +FC D+GL MG ++ G+TC+++
Sbjct: 46 IVAKYTYTELLRRVNTIAKFCDDLGLGKTVGIHMGHELDFLCSIFALWATGRTCVIF 102
>SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 27.5 bits (58), Expect = 0.85
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 145 VLPTIPSPTTVIFNLFVVPMVRAATSDKPISPQNS 41
V P +P ++ L VV M + +T+D I P+N+
Sbjct: 113 VSPAVPITFAYLYALAVVSMFKCSTADPGILPRNA 147
>SPBC4C3.03 |||homoserine kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 338
Score = 27.5 bits (58), Expect = 0.85
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 169 LVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATSDKPISP 50
L + ++ VLPT T V++NL + ++ A PI+P
Sbjct: 206 LATSKARSVLPTSYGRTDVVYNLQRLALLTTALGQTPINP 245
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.5 bits (58), Expect = 0.85
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = -1
Query: 280 SCPAVSHNAISTSSPSTVMWPT*-LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFN 104
S P S +++ SS S + + LS+++ T +S + TYS V+P+ + + +
Sbjct: 626 SSPTPSTSSLMISSSSIISGSSSILSSSISTIPISSS--LSTYSSSVIPSSSTLVSSSSS 683
Query: 103 LFVVPMVRAATSDKPISPQNSRFKT 29
L V A++S PI +S T
Sbjct: 684 LIVSSSPVASSSSSPIPSSSSLVST 708
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.8 bits (54), Expect = 2.6
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -1
Query: 268 VSHNAISTSSPSTVMWP-T*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVV 92
VS +ST P + ++P T ++ T G ++F T S Q P+ T V + +
Sbjct: 1411 VSSTVVSTVVPGSTVYPVTHVTTTTGVSGESSAFTYTTSSTQYEPS----TVVTTSYYTT 1466
Query: 91 PMVRAATSDKPIS 53
+ +A + + +S
Sbjct: 1467 SVYTSAPATETVS 1479
>SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit Sfc9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 673
Score = 25.4 bits (53), Expect = 3.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -1
Query: 322 FVCVYDSGLNRS*SSCPAVSHNAISTSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYS 152
F YD L + C ++HN +S SPS V++ +T+ Y +S + T+S
Sbjct: 281 FAFRYDKSLGKF---CSFLNHNLLSLCSPSGVLFGHNDIDTIYVYILTHSGTLETFS 334
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 25.4 bits (53), Expect = 3.4
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -1
Query: 118 TVIFNLFVVPMVRAATSDKPISPQNSRFKTLLYKH 14
T I N+F+ P+V+A T + ++ + +L KH
Sbjct: 1340 TSIVNVFITPLVKARTFPESLTTYHLDLLLVLSKH 1374
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 24.2 bits (50), Expect = 7.9
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = -1
Query: 274 PAVSHNAISTSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFV 95
P S N +T P+T + T + T+ + + +V + T+ PTT + V
Sbjct: 86 PTTSMNTTTTVPPTTSLNTTTTTAPPTTHVNSTTTVVPPTTHVNTTTVVPPTTHVNTTTV 145
Query: 94 VPMVRAA--TSDKPISPQNS 41
VP A TS P + ++S
Sbjct: 146 VPPTTHANTTSFVPTTTESS 165
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,799,008
Number of Sequences: 5004
Number of extensions: 37838
Number of successful extensions: 130
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 140222766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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