Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30503
(409 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 152 1e-37
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 145 1e-35
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 141 2e-34
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 2e-25
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 107 5e-24
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 101 2e-22
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 89 1e-18
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 79 1e-15
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 5e-14
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 7e-14
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 3e-13
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 69 2e-12
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 3e-12
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 1e-11
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 65 2e-11
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 62 1e-10
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 62 2e-10
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 61 4e-10
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 60 5e-10
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 60 9e-10
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 58 3e-09
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 58 3e-09
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 57 5e-09
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 57 5e-09
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 57 6e-09
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 56 8e-09
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 56 1e-08
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 56 1e-08
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 2e-08
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 3e-08
SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 6e-08
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 53 1e-07
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 52 1e-07
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 52 2e-07
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 3e-07
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 4e-07
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 51 4e-07
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 47 5e-06
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 47 7e-06
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 47 7e-06
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 46 2e-05
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 44 5e-05
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 6e-05
SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 1e-04
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 1e-04
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 42 2e-04
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 42 3e-04
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 4e-04
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 6e-04
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 40 6e-04
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 8e-04
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 40 0.001
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 39 0.001
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08) 39 0.002
SB_17192| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.002
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 38 0.002
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 38 0.002
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 38 0.003
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 38 0.004
SB_58962| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.006
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 36 0.010
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.013
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.017
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 36 0.017
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 36 0.017
SB_2281| Best HMM Match : Ras (HMM E-Value=3.4e-06) 34 0.039
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 34 0.039
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 33 0.068
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 33 0.090
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.090
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 33 0.12
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 32 0.16
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.21
SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05) 32 0.21
SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.27
SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.36
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 30 0.63
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 30 0.63
SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46) 30 0.63
SB_19088| Best HMM Match : PSGP (HMM E-Value=2.5) 30 0.84
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 29 1.1
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 29 1.5
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 29 1.9
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 28 3.4
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 28 3.4
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 27 4.5
SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37) 27 4.5
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 27 5.9
SB_8501| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 27 7.8
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 152 bits (368), Expect = 1e-37
Identities = 66/112 (58%), Positives = 86/112 (76%)
Frame = +3
Query: 72 VAARTMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVE 251
+AA M ++ K+ +VGDG GKTCLL V+++++FPE YVPTVF+NYV I VDG+ VE
Sbjct: 5920 LAALAMAAIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVE 5978
Query: 252 MALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF 407
+ALWDTAGQEDY+RLRPLSY T+ L+C+S+ S S EN+ KW PE+KHF
Sbjct: 5979 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF 6030
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 145 bits (351), Expect = 1e-35
Identities = 65/100 (65%), Positives = 76/100 (76%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQED 284
+K VVGDG VGKTCLL YT N+FP EYVPTVFDNY + + GE + L+DTAGQED
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKH 404
Y+RLRPLSY QT+ FLVC+SV S SS+ENV KW PE+ H
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH 103
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 141 bits (342), Expect = 2e-34
Identities = 60/102 (58%), Positives = 76/102 (74%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
+ +K+ VVGDG VGK+ L T N FP EY+PTVFDNY +I +DG+ + LWDTAGQ
Sbjct: 4 QNVKLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSSNIMLDGKAYNVGLWDTAGQ 63
Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKH 404
EDY+RLRPLSY T+ FLVC+ +GSR+S+EN+ KW PEL H
Sbjct: 64 EDYDRLRPLSYPMTDVFLVCFDIGSRTSFENIESKWLPELNH 105
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 111 bits (268), Expect = 2e-25
Identities = 50/102 (49%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFD-NYVGHITVDGEDVEMALWDTAGQE 281
LK+ +VGDG VGKT L N FP EY+PT +D + VDG + L+D+AG E
Sbjct: 7 LKLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDSAGGE 66
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF 407
D++RLRPL Y T+ FLVC+ + R+S+ENV +W PEL HF
Sbjct: 67 DFDRLRPLGYPNTDIFLVCFDIAHRASFENVALRWLPELDHF 108
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 107 bits (256), Expect = 5e-24
Identities = 49/103 (47%), Positives = 67/103 (65%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
++LK +VGDG VGKT LL Y + FP YVPT FD Y + V+ + + DTAGQ
Sbjct: 17 EQLKCVIVGDGGVGKTSLLVSYMMDGFPNSYVPTAFDTYHVTVEVNKKLCMIEFCDTAGQ 76
Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF 407
ED++ LRPL Y+ + F+VC+SV S +S+ NV KW PE++ F
Sbjct: 77 EDFDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPEIREF 119
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 101 bits (242), Expect = 2e-22
Identities = 41/99 (41%), Positives = 64/99 (64%)
Frame = +3
Query: 102 RLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQE 281
R+ + +VGD GKT LL Y RN+F E+Y TVF++ + VDGE +E+ LWDT+G E
Sbjct: 232 RIPVILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLSTAVEVDGERIELTLWDTSGHE 291
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL 398
DY+ +RPLSY + L+C+ + + ++++ KW E+
Sbjct: 292 DYDHVRPLSYNNVDIVLICFDISRPKTADSILEKWIIEV 330
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 89.0 bits (211), Expect = 1e-18
Identities = 40/103 (38%), Positives = 61/103 (59%)
Frame = +3
Query: 87 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 266
M + ++LK+ + GD VGKT L T+NE E PT F NY + V + + LWD
Sbjct: 1 MASERKLKVVLTGDNNVGKTSFLINLTQNEL--EGTPTAFANYELGLEVGSQKFLLDLWD 58
Query: 267 TAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPE 395
T G +Y+RLRPL+Y ++ L+C+ + +R ++E + KW PE
Sbjct: 59 TEGTTEYDRLRPLTYQGSDIILLCFDISNRQTFERIESKWLPE 101
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 79.0 bits (186), Expect = 1e-15
Identities = 40/117 (34%), Positives = 68/117 (58%), Gaps = 13/117 (11%)
Frame = +3
Query: 96 TKRLKITVVGDGMVGKTCLLYV-YTRNEFPEEY-------VPTVFDNYVGHITVDGEDVE 251
T+RLK+ VVGD VGKTC+LY + ++ P++ +P V +++ + + D +
Sbjct: 6 TRRLKLKVVGDTNVGKTCILYRWFLESQSPQDVYTVMPKSIPPVQESFYTNFSYDRVNYI 65
Query: 252 MALWDTAG-----QEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF 407
+ WDT + D +LRPL Y T+ F++C+ + + +S++NV W PELKH+
Sbjct: 66 VTYWDTCTLARTEELDLSKLRPLEYRDTDVFIICFDITNPTSFQNVSTVWVPELKHY 122
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 73.7 bits (173), Expect = 5e-14
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
KI +VGD VGKTCL+ +T+ FP PT+ D + + VDGE V++ +WDTAGQE
Sbjct: 9 KIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQER 68
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF 407
+ + Y + +V Y + ++ S+E+ + +W + +
Sbjct: 69 FRSITQSYYHNADGVIVTYDITNKKSFES-LPQWLDDTNRY 108
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 73.3 bits (172), Expect = 7e-14
Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLY--VYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTA 272
+ ++I ++GD VGKTCLL Y N +++ ++ +NYV +I VDG+ ++ L D
Sbjct: 17 RNIRIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVANIIVDGKVYKLELCDVD 76
Query: 273 GQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKH 404
D + +P S T+ F +C+SVG S+ +V +KWY E+K+
Sbjct: 77 NL-DTKISKPFS--DTDVFCLCFSVGDMDSFRHVENKWYAEVKN 117
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 71.3 bits (167), Expect = 3e-13
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQED 284
+K+ VGD VGKT LY T + FP ++ ++FD Y + +DG+ + L DT G
Sbjct: 10 IKVVFVGDKNVGKTSFLYAATTHNFPTGFIASIFDGYSKTMEIDGKRYTVLLCDTPGTM- 68
Query: 285 YERLRPLSYTQ-TNCFLVCYSVGSRSSYENVVHKWYPEL 398
+ R+ P + Q + FL+C+ + +R S+ N+ W P +
Sbjct: 69 HPRIPPQHWFQYASVFLLCFDIANRESFANIESTWLPHV 107
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 68.5 bits (160), Expect = 2e-12
Identities = 34/100 (34%), Positives = 57/100 (57%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
K+ K+ VVG G VGK+ L + ++ F +Y PT+ D+Y +D + + DTAGQ
Sbjct: 10 KQYKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCVIDERVAHLDILDTAGQ 69
Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL 398
E++ +R FL+ +SV RSS+E ++K+Y ++
Sbjct: 70 EEFSAMREQYMRSGEGFLLVFSVTDRSSFEE-INKFYNQI 108
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 67.7 bits (158), Expect = 3e-12
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAG 275
K KI ++GD VGKTCL Y +FPE T+ D + + ++GE V++ LWDTAG
Sbjct: 45 KTFKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAG 104
Query: 276 QEDYERLRPLS-YTQTNCFLVCYSVGSRSSYENVVHKWYPELKH 404
QE + + Y N + Y + + S+E + W E +H
Sbjct: 105 QERFRKSMVCHYYRNVNAVVFMYDITRKCSFE-ALTTWIVEYRH 147
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 65.7 bits (153), Expect = 1e-11
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQE 281
LKI +VG+ VGK+ LL +T + F + T+ D V +TV+G ++A+WDTAGQE
Sbjct: 9 LKILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQE 68
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF 407
+ L P Y ++ Y SR +++ + +W E++ +
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDTNSRETFDK-LEEWLNEVEMY 109
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 65.3 bits (152), Expect = 2e-11
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Frame = +3
Query: 102 RLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGE-DVEMALWDTAG 275
+ +I ++GD VGK+ LL +T +F E PTV D +V + + G+ +++ +WDTAG
Sbjct: 13 QFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAG 72
Query: 276 QEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK 401
QE + + Y T L+ Y + +R S+ NV+ WY E K
Sbjct: 73 QERFRSITYSYYRNTVGCLIIYDITNRDSFVNVM-DWYKEAK 113
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 62.5 bits (145), Expect = 1e-10
Identities = 30/86 (34%), Positives = 51/86 (59%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDY 287
KI+++G G VGKT LL + ++F E++VPTV D ++ + +DG + DTAG +
Sbjct: 14 KISILGAGGVGKTSLLKTFFGHKFSEKHVPTVDDYFIHSVNMDGVYYSTCIVDTAGTYAF 73
Query: 288 ERLRPLSYTQTNCFLVCYSVGSRSSY 365
+R L+ F+V +++ S SS+
Sbjct: 74 PVMRRLAIHTCQAFIVVFAINSESSF 99
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 62.1 bits (144), Expect = 2e-10
Identities = 29/101 (28%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
K+ ++GD VGK+ LL + + F Y+ T+ D + +TVDG+ +++ +WDTAGQE
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQER 69
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF 407
+ L Y + ++ Y V ++ + + +W E+ +
Sbjct: 70 FRTLTTAYYRSAHGIVLIYDVNESETFLH-LSQWLEEVSEY 109
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 60.9 bits (141), Expect = 4e-10
Identities = 31/92 (33%), Positives = 49/92 (53%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
K K+ V+G G VGK+ L + +F E+Y PT+ D Y I VD + + DTAG
Sbjct: 2 KEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYRKEIEVDNNPSILEILDTAGT 61
Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENV 374
E + +R L FL+ YS+ +R ++ ++
Sbjct: 62 EQFASMRDLYIKNGQGFLLVYSLINRQTFADL 93
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 60.5 bits (140), Expect = 5e-10
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Frame = +3
Query: 84 TMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMAL 260
TMG + K+ ++G+ VGK+ L+ + + +F E T+ ++ + +D V+ +
Sbjct: 15 TMGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEI 74
Query: 261 WDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK 401
WDTAGQE Y L P+ Y +V Y + ++ ++ W EL+
Sbjct: 75 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFAR-AKTWVKELQ 120
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 59.7 bits (138), Expect = 9e-10
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMALWDTAGQED 284
KI ++GD VGK+ LL +TRNEF E T+ + I V+G+ ++ +WDTAGQE
Sbjct: 14 KIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQER 73
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK 401
Y + Y ++ Y + + ++++ V +W E++
Sbjct: 74 YRAITSAYYRGAVGAVLVYDLTKQKTFQD-VERWLLEVR 111
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 58.0 bits (134), Expect = 3e-09
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
K+ V+GD VGK+ L+ + +EF + T+ D ++ +DG+ V++ LWDTAG+E
Sbjct: 12 KVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEEK 71
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPE 395
Y L + + L+ + V + S++++ W E
Sbjct: 72 YRALSRSFFRGADGALLVFDVSVKESFDSIRDYWLHE 108
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 58.0 bits (134), Expect = 3e-09
Identities = 30/109 (27%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Frame = +3
Query: 66 SDVAARTMGTTKRL-KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDG 239
S + + T +R+ K+ +GD VGK+ L+ + +++ + T+ D + + V+G
Sbjct: 883 SQASPTRLKTPERVFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNG 942
Query: 240 EDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKW 386
+ + + LWDTAGQE + + + + + L+ Y V + SS+ N + KW
Sbjct: 943 QCIAIQLWDTAGQERFRSITKQYFRKADGILIFYDVTAESSFTN-LKKW 990
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 57.2 bits (132), Expect = 5e-09
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = +3
Query: 120 VGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGED-VEMALWDTAGQEDYERL 296
VGDG GKT + + EF ++Y+ T+ I ++ +WDTAGQE + L
Sbjct: 38 VGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFGGL 97
Query: 297 RPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK 401
R Y Q C ++ + V SR +Y+NV + W+ +L+
Sbjct: 98 RDGYYIQGQCAIIMFDVTSRVTYKNVPN-WHRDLE 131
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 57.2 bits (132), Expect = 5e-09
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FD-----------NYVGHITVDGEDV 248
+K +GD VGKT LLY YT + F +VPT+ D N G + G+ +
Sbjct: 107 IKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRI 166
Query: 249 EMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK 401
+ LWDTAGQE + L + FL+ + + S+ N + W +L+
Sbjct: 167 HLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVN-IRNWLSQLQ 216
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 56.8 bits (131), Expect = 6e-09
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
K+ ++G+ VGKT L+ Y + F +V TV D V + + + V++ +WDTAGQE
Sbjct: 23 KLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQER 82
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENV 374
Y + Y F++ Y + + S++ V
Sbjct: 83 YRTITTAYYRGAMGFILMYDITNEESFQAV 112
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 56.4 bits (130), Expect = 8e-09
Identities = 25/67 (37%), Positives = 41/67 (61%)
Frame = +3
Query: 207 DNYVGHITVDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKW 386
D++ G I VD + + + + Q Y++LR Y T+ FLVC+SV + S ++VV++W
Sbjct: 102 DSWSGPIIVDNKAYNIEIHECTSQTAYDQLRAELYPDTDVFLVCFSVTLQQSLKDVVNRW 161
Query: 387 YPELKHF 407
PEL+ F
Sbjct: 162 VPELRRF 168
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 56.0 bits (129), Expect = 1e-08
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ-ED 284
+I ++GD VGKT LL + + F EY PT+ D Y I +D V + + DTA + ++
Sbjct: 7 RIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKYRKSINIDDVTVTLEILDTASRGQN 66
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK 401
+LR + + F+V YS RS++ N +H++ +K
Sbjct: 67 SCKLRDQFVREGDGFIVVYSTADRSTFAN-LHRYRDMMK 104
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 56.0 bits (129), Expect = 1e-08
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGE-DVEMALWDTAGQED 284
++ V+G G VGKT L+ + F E+Y PTV D Y +T+ + + + + DTAG
Sbjct: 109 RVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAFLEIMDTAGSYP 168
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVV 377
+ ++ L+ + F++ YSV ++S + +
Sbjct: 169 FPAMKKLTIQNADAFVLVYSVDEKASLQEAL 199
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 55.2 bits (127), Expect = 2e-08
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Frame = +3
Query: 186 EYVPTVFDNYVGHITVDGEDVEMALW-----DTAGQEDYERLRPLSYTQTNCFLVCYSVG 350
EY PT Y ++ + V +++ DT G + +RPL+Y + F++C+ V
Sbjct: 48 EYKPTALKAYSTNVYSNPTGVVYSVYQANIVDTGGSTVLDYVRPLAYIHADLFILCFDVT 107
Query: 351 SRSSYENVVHKWYPELK 401
+R+S+ENV KW+PE++
Sbjct: 108 NRASFENVASKWFPEIR 124
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 54.4 bits (125), Expect = 3e-08
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Frame = +3
Query: 114 TVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMALWDTAGQEDYE 290
T+ DG VGK+ L+ + +F + T+ ++ + +DGE + +WDTAGQE ++
Sbjct: 215 TLSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFK 274
Query: 291 RLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF 407
LR Y ++ L+ Y+V S+ N + W E ++
Sbjct: 275 SLRTPFYRGSDLCLLVYAVDDAKSFTN-LSMWKKEFLYY 312
>SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 53.6 bits (123), Expect = 6e-08
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 21/122 (17%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLY-------VYTRNEFPEE----YVPTVF--DNYV--------G 221
+K VVG+ VGKT L+ + T+ P + PTVF D Y
Sbjct: 15 IKCVVVGNSGVGKTRLICAEALGVGMKTQEANPRHVRHVHYPTVFAIDQYHVSAEIRDRA 74
Query: 222 HITVDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK 401
+ T+DG V + LWDT G D+ R +Y + ++C+++ + SS+++V WYPE+K
Sbjct: 75 NFTIDGVSVSLRLWDTFG--DHSMNRRFAYQNAHVIVLCFAINTPSSFKDVNAVWYPEIK 132
Query: 402 HF 407
+
Sbjct: 133 KY 134
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 52.8 bits (121), Expect = 1e-07
Identities = 24/89 (26%), Positives = 46/89 (51%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
+R I G VGKT L+ + F ++Y PT+ D ++ H+ + E E+ + DT+G
Sbjct: 27 RRFTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIEDFFIKHVFFNNETYELQIIDTSGT 86
Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSY 365
++ +R + + + F++ YS S+
Sbjct: 87 YEFPAMRKVDIAKGDAFVLVYSQDHPESF 115
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 52.4 bits (120), Expect = 1e-07
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +3
Query: 87 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 266
M K KI V+G VGK+ L + +F + Y PT+ + + +I G++ + L D
Sbjct: 1 MAPPKSRKIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKNIKYKGQEFFLELVD 60
Query: 267 TAGQEDYERLRPLSYTQ-TNCFLVCYSVGS 353
TAGQ++Y + P SY+ + +++ Y+V S
Sbjct: 61 TAGQDEYS-IFPQSYSMGIHGYILVYAVTS 89
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 52.0 bits (119), Expect = 2e-07
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
K+ VVGD VGKT L+ +T+ F + TV D + + G+ V++ WDTAGQE
Sbjct: 13 KVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQEK 72
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENV 374
+ + Y + ++ + + +R ++ ++
Sbjct: 73 FRGITQSYYRNADAVILVFDITNRGTFASI 102
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 51.6 bits (118), Expect = 2e-07
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +3
Query: 177 FPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGS 353
F Y+ T+ D + I +DGE V++ +WDTAGQE + + Y T+ +V Y V S
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTS 61
Query: 354 RSSYENVVHKWYPEL 398
++ N V +W E+
Sbjct: 62 ADTFVN-VKRWLHEI 75
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 51.2 bits (117), Expect = 3e-07
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
KI +GD VGK+ L + + F E+Y PT+ D + +D +V + +WDTAGQE
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENV 374
+ L + L+ + + + +S+E+V
Sbjct: 225 FRCLIHSYIRDSEAALIVFDITNYTSFESV 254
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 50.8 bits (116), Expect = 4e-07
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 22/122 (18%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLY--------------VYTR-------NEFPEEYVPTV-FDNYVG 221
K+ ++GD VGK+CLL +Y+ + + E Y+ T+ D +
Sbjct: 10 KLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGVDFKIR 69
Query: 222 HITVDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK 401
I +DG+ +++ +WDTAGQE + + Y + +V Y V + S+ N V +W E+
Sbjct: 70 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNN-VKQWLQEID 128
Query: 402 HF 407
+
Sbjct: 129 RY 130
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 50.8 bits (116), Expect = 4e-07
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAG 275
+ KI + GD VGK+ + RN F T+ D + + VDG+ + LWDTAG
Sbjct: 441 RMFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAG 500
Query: 276 QEDYERLRPLSYTQTNCFLVCYSVGSRSSYENV 374
QE + + + + + L+ Y V +S+ +V
Sbjct: 501 QERFRSIAKSYFRKADGVLLLYDVTCETSFLDV 533
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 47.2 bits (107), Expect = 5e-06
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEY--VPTVFDNYVGHITVDGEDVEMALWDTAGQE 281
KI + G VGKT + + +EFPEE + + ++ + + + +++ LWDT G E
Sbjct: 10 KIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDTLGME 69
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENV 374
+YE L Y+ + LV YS+ S V
Sbjct: 70 EYESLTRNHYSNSKVVLVVYSLDLPDSLAQV 100
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 46.8 bits (106), Expect = 7e-06
Identities = 31/89 (34%), Positives = 47/89 (52%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDY 287
++ VVG G VGK+ + Y +NEF E +Y G + D+E+ DTAGQE+Y
Sbjct: 2600 RLCVVGSGGVGKSSVTIRYLKNEFTEI-------DYCGKLY----DIEVV--DTAGQEEY 2646
Query: 288 ERLRPLSYTQTNCFLVCYSVGSRSSYENV 374
R S + FLV +++ S SS+ +
Sbjct: 2647 TSFRDSSLATGDAFLVLFAINSASSWNEL 2675
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 46.8 bits (106), Expect = 7e-06
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQED 284
+K+ ++G+ VGK+ L + F EY T+ Y V GE V + L DTAG+
Sbjct: 862 VKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYRQDAEVAGEVVAIELTDTAGENS 921
Query: 285 YERL-RPLSYTQTNCFLVCYSVGSRSSYE 368
+L R L + F+V YS+ SR S++
Sbjct: 922 PAKLERCLEIGEV--FVVLYSITSRHSFD 948
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 45.6 bits (103), Expect = 2e-05
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
K+ ++G+ VGKT L Y N F T+ D+ + + + V +++WDTAG E
Sbjct: 13 KVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGVER 72
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF 407
+ + Y + ++ ++V S + ++H W + F
Sbjct: 73 FRTVTKNYYRGAHACILMFNVDDPGSLQYLLH-WIHDTDEF 112
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 44.0 bits (99), Expect = 5e-05
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMALWDT 269
K+ ++GD VGK+ LL +TRNEF E T+ + I VDG+ ++ +WDT
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 43.6 bits (98), Expect = 6e-05
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Frame = +3
Query: 87 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV--------FDNYVGHITVDGE 242
M ++++I VVGD VGKT L+++ E T+ +D G G+
Sbjct: 1 MAAVEKVRIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEG--MPGGK 58
Query: 243 DVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL 398
+ WD G ++E R + Y N ++ + + +R S+ N + KW E+
Sbjct: 59 TFFLEFWDIGGSANHENSRSIFYNGINGLILVHDLTNRKSFTN-LRKWLAEV 109
>SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 42.3 bits (95), Expect = 1e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = +3
Query: 84 TMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALW 263
T T++R K++VVGD GKT LL +++ E +F+ V +T ++E LW
Sbjct: 55 THATSERYKLSVVGDAESGKTSLLNALVKSDIEVEET-VIFEECVTDVTSGDSNLEFMLW 113
Query: 264 DTA 272
D++
Sbjct: 114 DSS 116
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 42.3 bits (95), Expect = 1e-04
Identities = 26/86 (30%), Positives = 42/86 (48%)
Frame = +3
Query: 111 ITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDYE 290
+ ++G VGK+ LL + F EY PT+ Y T+D + + + DTA YE
Sbjct: 130 LVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDVSATIDEDPATLHITDTA--STYE 187
Query: 291 RLRPLSYTQTNCFLVCYSVGSRSSYE 368
P+ +Q F+V YS+ ++E
Sbjct: 188 ---PVYLSQNEGFIVVYSINELRTFE 210
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 41.9 bits (94), Expect = 2e-04
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +3
Query: 93 TTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTA 272
TTK +++ V+G VGK+ L + F EY T+ + + +D EDV + + DTA
Sbjct: 13 TTKPVRVVVLGKDGVGKSALTVRFLTRRFIGEYDQTLESTHRHILQIDNEDVSLDISDTA 72
Query: 273 GQ 278
G+
Sbjct: 73 GE 74
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 41.5 bits (93), Expect = 3e-04
Identities = 15/56 (26%), Positives = 33/56 (58%)
Frame = +3
Query: 240 EDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF 407
+DV++ +WDTAGQE + + Y N ++ Y + +++NV+ +W +++ +
Sbjct: 93 QDVKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVI-RWGEDVQKY 147
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 40.7 bits (91), Expect = 4e-04
Identities = 23/103 (22%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Frame = +3
Query: 96 TKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHIT--VDGEDVEMALWDT 269
T+ K+ VVGD + GK + Y N + Y PT+ ++ + + +W
Sbjct: 16 TRNFKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLI 75
Query: 270 AGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL 398
AGQE + + + Y + +V + + +++ + + KW +L
Sbjct: 76 AGQERFSSMTRVYYKGADACVVLFDLERQTTLDGAI-KWKKDL 117
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 40.3 bits (90), Expect = 6e-04
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +3
Query: 81 RTMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHI 227
R+ K+L I V+G+G VGK+ L+ + F EEYVPT+ + H+
Sbjct: 20 RSSAYLKKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTIEEFVSKHL 68
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 40.3 bits (90), Expect = 6e-04
Identities = 27/92 (29%), Positives = 43/92 (46%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
K K+ V+G G VGK+ L + +F E+Y PT+ D Y TAG
Sbjct: 2 KEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFY----------------HTAGT 45
Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENV 374
E + +R L FL+ YS+ +R ++ ++
Sbjct: 46 EQFASMRDLYIKNGQGFLLVYSLINRQTFADL 77
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 39.9 bits (89), Expect = 8e-04
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTA 272
KI ++GD VGK+ LL YT+NEF T+ + ++ ++G+ V +WDTA
Sbjct: 20 KIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTA 75
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/109 (20%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Frame = +3
Query: 69 DVAARTMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVF---DNYVGHITVDG 239
++ +R K ++G+ VGK+CL+ F ++V + D + + D
Sbjct: 339 EIISRQPNWDYEFKTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDN 398
Query: 240 EDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKW 386
+ +++ + DTAGQE Y + P + + + + ++ +H+W
Sbjct: 399 KKIKLTIGDTAGQERYFSILPAYFRGVQGVFLVFDITVEITFLQ-LHRW 446
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +3
Query: 231 VDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF 407
V+ + + +WDTAGQE ++ L PL Y ++ Y + S++ + + W EL+ +
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHS-LRPWIRELQRY 61
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 87 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 266
M + L + V+G VGK+ F EY P + NY + +DG+ + + + D
Sbjct: 176 MTNNRALSVAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYKHSMEIDGQYLALDVLD 235
Query: 267 TAGQEDYE-RLRPLSYTQT 320
TAG+ E R+ P T+T
Sbjct: 236 TAGKVSREARMSPRQKTKT 254
>SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08)
Length = 155
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +3
Query: 162 YTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCY 341
+ F EY P + +Y H+TV G+ + M + DTAG+ +++ L N + Y
Sbjct: 6 FITRRFIGEYDPCLEASYRHHLTVHGQYIAMDVVDTAGKNTPDKVDAL-LEAANIVYLLY 64
Query: 342 SVGSRSSYE 368
SV R+S+E
Sbjct: 65 SVTDRASFE 73
>SB_17192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 37
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHK 383
E+YE +R Y T+ FLVC+ +G+ SS ++V+ K
Sbjct: 3 ENYESIRRQMYLDTDVFLVCFDIGNPSSLQSVIDK 37
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +3
Query: 225 ITVDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK 401
+ V G+ V++ +WDTAGQE + + Y L+ Y + SR ++ N + W + +
Sbjct: 137 VNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETF-NSLTNWLTDAR 194
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDT 269
K+ ++G VGKT L+ + F E++PT+ D + + DG + L DT
Sbjct: 189 KMAILGGSAVGKTSLMRALFKKPFTNEHIPTIDDYIIHALNQDGVHYNVCLVDT 242
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 37.9 bits (84), Expect = 0.003
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +3
Query: 237 GEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL 398
G+ +++ +WDTAGQE + + Y ++ Y V + S+ N + KW ++
Sbjct: 2 GKKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSN-ISKWLKKI 54
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 37.5 bits (83), Expect = 0.004
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDY 287
+I V G VGKT ++ + +F EEY PTV D Y + +G + + D++G +
Sbjct: 10 EIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTVEDCYSKVLNKNGSIMVLNTTDSSGSYQF 69
Query: 288 ERLRPLS 308
+R ++
Sbjct: 70 PAMREVA 76
>SB_58962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 59
Score = 37.1 bits (82), Expect = 0.006
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +3
Query: 213 YVGHITVDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYE 368
Y H+ VDG+ + + + DTAG+ E++ T F + YSV R+S++
Sbjct: 4 YRHHLIVDGQFISLDIMDTAGKNSVEKM-STCLTFAELFFIVYSVTDRTSFD 54
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 36.3 bits (80), Expect = 0.010
Identities = 24/99 (24%), Positives = 44/99 (44%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQED 284
L++ +VG GKT +LY +E P +PT+ N V+ ++++ +WD GQ+
Sbjct: 91 LRLLMVGLDAAGKTTILYHLKLDE-PVNTIPTIGFNVE---VVEYKNIKFTVWDIGGQDK 146
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK 401
L L + +T + R + + + LK
Sbjct: 147 IRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLK 185
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 35.9 bits (79), Expect = 0.013
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 228 TVDGEDVEMALWDTAGQEDYERLRPLSY 311
+ +GED+ + LWDTAGQE+++ + Y
Sbjct: 28 SANGEDIRLMLWDTAGQEEFDAITKAYY 55
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 35.5 bits (78), Expect = 0.017
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = +3
Query: 63 LSDVAARTMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGE 242
+S + R G K+++I +VG GKT +LY E +PT+ N +V+ +
Sbjct: 5 ISSLFTRLFGK-KQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---SVEYK 59
Query: 243 DVEMALWDTAGQEDYERLRPL 305
++ +WD GQ +++RPL
Sbjct: 60 NISFTVWDVGGQ---DKIRPL 77
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 35.5 bits (78), Expect = 0.017
Identities = 22/90 (24%), Positives = 37/90 (41%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
+ +++T+VG GKT + V +F E+ +PTV N V +V + +WD GQ
Sbjct: 19 EEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNM---RKVSKGNVTIKVWDIGGQ 75
Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSYE 368
+ + NC + E
Sbjct: 76 PRFRSMWERYCRGVNCIVYMVDAADHDKLE 105
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 35.5 bits (78), Expect = 0.017
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
K ++I +VG GKT +LY E +PT+ N TV+ +++ +WD GQ
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGQ 71
Query: 279 EDYERLRPL 305
+++RPL
Sbjct: 72 ---DKIRPL 77
>SB_2281| Best HMM Match : Ras (HMM E-Value=3.4e-06)
Length = 138
Score = 34.3 bits (75), Expect = 0.039
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +3
Query: 198 TVFDNYVGHITVDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENV 374
T ++ I G+ ++ + D+AGQE+Y R S + FLV +++ S SS+ +
Sbjct: 7 TFYNLMFNQIDYCGKLYDIEVVDSAGQEEYTSFRDSSLATGDAFLVLFAINSASSWNEL 65
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 34.3 bits (75), Expect = 0.039
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 90 GTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPT 200
G +KI + GD GKTC+ + F E+Y+PT
Sbjct: 221 GVHYNMKIVIKGDRNTGKTCMFHRLHGKPFNEQYIPT 257
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 33.5 bits (73), Expect = 0.068
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 258 LWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENV 374
LWDT G E+YE L Y+ + LV YS+ S V
Sbjct: 3 LWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQV 41
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 33.1 bits (72), Expect = 0.090
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 261 WDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF 407
W+ AGQE + + Y + ++ Y + R SY N +HKW E++ +
Sbjct: 374 WE-AGQERFRTITSSYYRGAHGVMIVYDITKRESYNN-LHKWLMEVETY 420
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 33.1 bits (72), Expect = 0.090
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Frame = +3
Query: 93 TTKRLKITVVGDGMVGKTCLL-YVYTRNEF---PEEYVPTVFDNYVGHITVDGEDVEMAL 260
T K+ K+ +VGD VGK+ ++ + + +E Y PT + + T + L
Sbjct: 10 TYKQYKVVLVGDAGVGKSFVIDRLNSTSEHWQGSRLYKPTT-GGHASYFTA-SNSCHLYL 67
Query: 261 WDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKW 386
DT+G E+Y L + +C + +++ S + + KW
Sbjct: 68 LDTSGLEEYRELTKIYLKNLDCVVFTFALNDPHSLSS-LEKW 108
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 32.7 bits (71), Expect = 0.12
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV 203
K+ ++GD VGKTC+L+ ++ + F ++ T+
Sbjct: 11 KLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 32.3 bits (70), Expect = 0.16
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 258 LWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPE 395
+WDTAGQE ++ L Y +C ++ + V +S++ + W E
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFK-TLDSWRDE 45
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 31.9 bits (69), Expect = 0.21
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV 203
K+ +VGD VGKT + Y EY PT+
Sbjct: 24 KVLIVGDATVGKTSFVQRYVHGNTRREYKPTI 55
>SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05)
Length = 1960
Score = 31.9 bits (69), Expect = 0.21
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = -1
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ + + VG ++S S +V + + +PS + I + M R A S
Sbjct: 38 TPSPNITSYPSLMKSAVGNFTSATSVVVDSTTPNATRLVPSSSASISPNVTINMTREANS 97
Query: 67 DKPISPQNSRFKTLL 23
+ + + T L
Sbjct: 98 TMILPSTSVPYNTTL 112
Score = 31.5 bits (68), Expect = 0.27
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = -1
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S +V + + +PS + I + M R A S
Sbjct: 641 TPSPNITSYPSLMTSAVGNFTSATSVVVDSTTPNATRLVPSSSASISPNVTINMTREANS 700
Score = 31.5 bits (68), Expect = 0.27
Identities = 17/75 (22%), Positives = 34/75 (45%)
Frame = -1
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ + + VG ++S S + + + +PS + + F + M R A S
Sbjct: 1043 TPSPNITSYPSLMKSAVGNFTSATSVVFDSTTPNATRLVPSISASVSPNFTINMTREANS 1102
Query: 67 DKPISPQNSRFKTLL 23
+ + + T L
Sbjct: 1103 TMILPSTSVPYNTTL 1117
Score = 29.9 bits (64), Expect = 0.84
Identities = 17/75 (22%), Positives = 34/75 (45%)
Frame = -1
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS + I + M R A S
Sbjct: 239 TPSPNITSYPSLMTSAVGNFTSAKSVVFDSTTPNATTLVPSISASISPNVTINMTRKANS 298
Query: 67 DKPISPQNSRFKTLL 23
+ + + T L
Sbjct: 299 TMILPSTSVPYNTTL 313
Score = 29.9 bits (64), Expect = 0.84
Identities = 17/75 (22%), Positives = 34/75 (45%)
Frame = -1
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS + I + M R A S
Sbjct: 1445 TPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATRLVPSISASISPNVTIDMTREANS 1504
Query: 67 DKPISPQNSRFKTLL 23
+ + + T L
Sbjct: 1505 TMILPSTSVPYNTTL 1519
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/74 (21%), Positives = 34/74 (45%)
Frame = -1
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS + I + M R A S
Sbjct: 1646 TPSPNITSYPSLMTSAVGNFTSAKSVVFDSTTPNATRVVPSISASISPNVTINMTREANS 1705
Query: 67 DKPISPQNSRFKTL 26
+ + + T+
Sbjct: 1706 TMILPSTSVPYNTM 1719
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = -1
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS + I + M R A S
Sbjct: 440 TPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATRVVPSISASISPNVTINMTREANS 499
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/75 (22%), Positives = 33/75 (44%)
Frame = -1
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ ++ VG ++S S + + + +PS + I + M R A S
Sbjct: 842 TPSPNITSYPSLTTSAVGNFTSATSVVFDSTTPNATRLVPSISASISPNVTIDMTREANS 901
Query: 67 DKPISPQNSRFKTLL 23
+ + + T L
Sbjct: 902 TMILPSTSVPYNTTL 916
Score = 27.5 bits (58), Expect = 4.5
Identities = 17/75 (22%), Positives = 32/75 (42%)
Frame = -1
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P ++ VG ++S S + + + +PS + I + M R A S
Sbjct: 1244 TPSPNITSYPLLTTSAVGNFTSATSVVFDSTTPNATRLVPSISASISPNVTINMTREANS 1303
Query: 67 DKPISPQNSRFKTLL 23
+ + + T L
Sbjct: 1304 TMILPSTSVPYNTTL 1318
>SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1229
Score = 31.5 bits (68), Expect = 0.27
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = -1
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS T I + M R A S
Sbjct: 239 TPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTLVPSITASISPNVTINMTREANS 298
Query: 67 DKPISPQNSRFKTLL 23
+ + + T L
Sbjct: 299 TMILPSTSVPYNTTL 313
Score = 29.9 bits (64), Expect = 0.84
Identities = 17/75 (22%), Positives = 34/75 (45%)
Frame = -1
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS + I + M R A S
Sbjct: 440 TPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTLVPSISASISPNVTINMTREANS 499
Query: 67 DKPISPQNSRFKTLL 23
+ + + T L
Sbjct: 500 TMILPSTSVPYNTTL 514
>SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1140
Score = 31.1 bits (67), Expect = 0.36
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 168 RNEFPEEYVPTVFDNYVGHITVDGEDV-EMALWDTAGQED 284
R ++ Y+P +YV H T +GEDV E L AG D
Sbjct: 465 RGKYQVSYLPNTPGDYVTHCTFNGEDVPESPLRSVAGDPD 504
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 30.3 bits (65), Expect = 0.63
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 264 DTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENV 374
DTAGQE+Y +R FL ++V + S+E++
Sbjct: 283 DTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDI 319
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 30.3 bits (65), Expect = 0.63
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 102 RLKITVVGDGMVGKTCLLYVYTRN--EFPEEYVPTV 203
R K+ V GD VGK+ L+ V+ + +P+ Y TV
Sbjct: 5 RAKVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTV 40
>SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46)
Length = 572
Score = 30.3 bits (65), Expect = 0.63
Identities = 17/75 (22%), Positives = 34/75 (45%)
Frame = -1
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS + I + M R A S
Sbjct: 222 TPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTPVPSISASISPNVTINMTRGANS 281
Query: 67 DKPISPQNSRFKTLL 23
+ + + T L
Sbjct: 282 TMILPSTSVPYNTTL 296
Score = 27.9 bits (59), Expect = 3.4
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = -1
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS + I M R A S
Sbjct: 21 TPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTLVPSISASISPNVTTNMTREANS 80
Score = 27.9 bits (59), Expect = 3.4
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = -1
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS + I M R A S
Sbjct: 423 TPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTLVPSISASISPNVTTNMTREANS 482
>SB_19088| Best HMM Match : PSGP (HMM E-Value=2.5)
Length = 737
Score = 29.9 bits (64), Expect = 0.84
Identities = 17/75 (22%), Positives = 34/75 (45%)
Frame = -1
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS + I + M R A S
Sbjct: 350 TPSPNITSYPSLMTSAVGNFTSAKSVVFDSTTPNATTLVPSISASISPNVTINMTRKANS 409
Query: 67 DKPISPQNSRFKTLL 23
+ + + T L
Sbjct: 410 TMILHSTSVPYNTTL 424
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/75 (22%), Positives = 34/75 (45%)
Frame = -1
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS + I + M R A S
Sbjct: 149 TPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATRLVPSISASISPNVTINMTREANS 208
Query: 67 DKPISPQNSRFKTLL 23
+ + + T L
Sbjct: 209 TMILPSTSVPYNTTL 223
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 29.5 bits (63), Expect = 1.1
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +3
Query: 96 TKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHI----TVDGEDVEMALW 263
+KR+K+ ++G+ GKT + E + T+ D VG + V+ + +E+ +
Sbjct: 258 SKRIKLVLLGESGAGKTSCAHGLVECEAINQ---TLNDGTVGVVIRNWQVEPDGLEVQVV 314
Query: 264 DTAGQEDYERLRPLSYTQTNCFLVCYSVGS 353
D AGQ Y+ P ++ L+ ++ S
Sbjct: 315 DCAGQRRYQLTHPFFLSEEALHLLVINLHS 344
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 29.1 bits (62), Expect = 1.5
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYV 218
K+ V+GD VGKT L+ Y F Y TV N V
Sbjct: 673 KVLVIGDLGVGKTSLIKRYVHQFFSVHYRATVSFNIV 709
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPT 200
LK+ ++GD VGKT LL + E + +PT
Sbjct: 13 LKVLLIGDSNVGKTKLLLTFLGQESIVQQMPT 44
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 27.9 bits (59), Expect = 3.4
Identities = 26/113 (23%), Positives = 40/113 (35%), Gaps = 13/113 (11%)
Frame = +3
Query: 102 RLKITVVGDGMVGKTCLLYVYTRNEFPEEY--VPTVFDNYVGHITVD-----------GE 242
R+K+ VVG GKT LL P V V D + I+ G
Sbjct: 666 RMKLMVVGIQGYGKTTLLAALKGQPLPSNLSTVGIVVDEWSVQISTSLLSRIGITSGIGP 725
Query: 243 DVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK 401
+ ++ WD AGQ Y + T + +L ++ + W +K
Sbjct: 726 TITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGEEGVENLRSWLLNIK 778
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 27.9 bits (59), Expect = 3.4
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +3
Query: 201 VFDNYVGHITVD----GEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSS 362
VFD + H+ D G +V +++ DTAG+E Y L + +V Y + SS
Sbjct: 254 VFDANIAHLFADNGNLGINVTISM-DTAGEEKYAGLSSFYCRGASAAIVAYDITKESS 310
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 96 TKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV 203
+++ + V+G VGKT L+ + F EY PT+
Sbjct: 322 SEKYSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTL 357
>SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37)
Length = 479
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +3
Query: 231 VDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLV 335
+ G + + WD G DY +R Y QT L+
Sbjct: 7 IHGVEYRINFWDFGGDPDYNEIRSELYGQTQIDLI 41
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 27.1 bits (57), Expect = 5.9
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 189 YVPTVFDNYVGHITVDGEDVE 251
YV T ++ GH+T+D E+VE
Sbjct: 46 YVDTDMSSHKGHLTIDQEEVE 66
>SB_8501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 543
Score = 26.6 bits (56), Expect = 7.8
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 87 WCVPRHPINQYHH 49
WC HP+N+Y H
Sbjct: 41 WCCRNHPLNEYKH 53
>SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2516
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 204 FDNYVGHITV--DGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLV 335
FDN + T DG V + A + Y RL+PL++++ C V
Sbjct: 2214 FDNSIKTFTANTDGSTVVTTTFPKAVRGQYFRLKPLTWSRNICIRV 2259
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 26.6 bits (56), Expect = 7.8
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 3/96 (3%)
Frame = +3
Query: 117 VVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDYERL 296
++G GKT +LY E VPT+ N TV +++ +WD GQ+ L
Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVST-VPTLGFNVE---TVTYKNISFTVWDIGGQDKIRAL 56
Query: 297 RPLSYTQTNCFLVCYSVGSRSSYE---NVVHKWYPE 395
+ Y + R E N +HK E
Sbjct: 57 WRVYYQGCQGIIFVVDSADRERAEEARNELHKLLAE 92
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,494,653
Number of Sequences: 59808
Number of extensions: 279666
Number of successful extensions: 979
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 740151420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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