Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30503
         (409 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...   156   3e-40
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    74   2e-15
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            57   3e-10
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   3.2  
EF588439-1|ABQ96675.1|  177|Anopheles gambiae transposase protein.     23   4.3  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   4.3  
CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence re...    23   4.3  

>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score =  156 bits (378), Expect = 3e-40
 Identities = 68/106 (64%), Positives = 80/106 (75%)
 Frame = +3

Query: 87  MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 266
           M + + +K  VVGDG VGKTC+L  YT + FP EYVPT FDNY   + VDG  V + LWD
Sbjct: 1   MSSGRPIKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSLGLWD 60

Query: 267 TAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKH 404
           TAGQEDY+RLRPLSY QT+ FL+CYSV S SS+ENV  KWYPE+KH
Sbjct: 61  TAGQEDYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKH 106


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 74.1 bits (174), Expect = 2e-15
 Identities = 32/46 (69%), Positives = 38/46 (82%)
 Frame = +3

Query: 267 TAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKH 404
           +AGQEDY+RLRPLSY QT+ FLVC+SV S SS+ENV  KW PE+ H
Sbjct: 1   SAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH 46


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 56.8 bits (131), Expect = 3e-10
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
 Frame = +3

Query: 102 RLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMALWDTAGQ 278
           + K+ ++G+  VGK+ L+  + + +F E    T+   ++   + +D   V+  +WDTAGQ
Sbjct: 24  QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQ 83

Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK 401
           E Y  L P+ Y      +V Y + +  S+      W  EL+
Sbjct: 84  ERYHSLAPMYYRGAQAAIVVYDIQNSDSFAR-AKTWVKELQ 123


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +2

Query: 113 NCCWRWYGWQDLLAICI 163
           +CCW W  +Q+ +A  +
Sbjct: 789 DCCWVWLKFQEWVAFIV 805


>EF588439-1|ABQ96675.1|  177|Anopheles gambiae transposase protein.
          Length = 177

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +3

Query: 129 GMVGKTCLLYVYTRNEFPEEYVPTVFDNYV 218
           G++ K CL +    +E  +++V T+  NY+
Sbjct: 114 GLICKECLPFNLVESEIFKKFVYTLNPNYI 143


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = -1

Query: 295 NRS*SSCPAVSHNAISTSSPSTVMW--PT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSP 122
           +RS S  P  S    S+  PS V+   PT     + + +  +  L  +     LPT PSP
Sbjct: 356 DRSESVSPVPSLPVRSSPEPSPVLLRSPTPAKKPLISVAPASKLLSKSLQPSTLPTRPSP 415


>CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence
           receptor protein.
          Length = 284

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +3

Query: 105 LKITVVGDGMVGKTCLLYVY 164
           ++IT V +G+ G+T  LYV+
Sbjct: 186 VQITEVDEGLDGETFFLYVF 205


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,157
Number of Sequences: 2352
Number of extensions: 9668
Number of successful extensions: 234
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 234
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32922351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)