Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30502
         (671 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.9  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    23   6.6  
AF203338-1|AAF19833.1|  113|Anopheles gambiae immune-responsive ...    23   6.6  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   8.8  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   8.8  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 499  RVHNKKVRTFPLCFDDTDMTAMLENASQKQVLVP 600
            R  N+K    P   ++T   A  EN  QKQ+LVP
Sbjct: 1099 RYVNRKGVALPTSSEETKR-AKRENLEQKQILVP 1131


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 439 LAAMMECVASCFCSHG 392
           LA    CV  CFC +G
Sbjct: 86  LACTKHCVEGCFCRNG 101


>AF203338-1|AAF19833.1|  113|Anopheles gambiae immune-responsive
           trypsin-like serineprotease-related protein ISPR10
           protein.
          Length = 113

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 325 QLLTPSTVKLNWTAHEDQDR 266
           Q +  STV+L W+A +DQ +
Sbjct: 11  QNIRSSTVRLIWSAQDDQQQ 30


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 213 WHVPAYPHQ*RT*AIN*QRSWSSCAV 290
           W VP Y    RT AIN +   S CA+
Sbjct: 601 WMVPIYKKGDRTDAINYRGITSLCAI 626


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -1

Query: 431 HDGVCGFLLLLSRGVANSWLTDTALYLSSFPSIMSSTSDAFN 306
           H   C  ++   RG+  +  T     L  FP+I+ S S A +
Sbjct: 535 HKKGCRSIVSNYRGITQTCATAKTFELCIFPTILHSCSSAIS 576


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,792
Number of Sequences: 2352
Number of extensions: 15626
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)