Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30502
(671 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117114-1|AAI17115.1| 376|Homo sapiens SWI/SNF related, matrix... 219 6e-57
AJ011738-1|CAA09759.1| 376|Homo sapiens Ini1b protein. 219 6e-57
AB017523-1|BAC77068.1| 376|Homo sapiens Ini1 protein. 219 6e-57
DQ230988-1|ABB02184.1| 385|Homo sapiens SWI/SNF related, matrix... 213 4e-55
CR456581-1|CAG30467.1| 385|Homo sapiens SMARCB1 protein. 213 4e-55
AJ011737-1|CAA09758.1| 385|Homo sapiens integrase interactor 1a... 213 4e-55
U04847-1|AAA81905.1| 385|Homo sapiens Ini1 protein. 210 3e-54
AK024025-1|BAB14784.1| 394|Homo sapiens protein ( Homo sapiens ... 197 3e-50
Y17118-1|CAA76639.1| 355|Homo sapiens SNF5/INI1 protein protein. 174 3e-43
AY207470-1|AAO59166.1| 80|Homo sapiens integrase interactor 1 ... 52 1e-06
AY207471-1|AAO59167.1| 89|Homo sapiens integrase interactor 1 ... 47 5e-05
BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein. 30 6.6
AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein. 30 6.6
AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein. 30 6.6
>BC117114-1|AAI17115.1| 376|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 376
Score = 219 bits (536), Expect = 6e-57
Identities = 112/194 (57%), Positives = 142/194 (73%), Gaps = 5/194 (2%)
Frame = +1
Query: 82 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 258
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 259 I--DNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELATP-RESKSKKPHTPS 429
+ + G KASEVE+I++GND+KYKAVS+S E T RE K+K+
Sbjct: 64 VASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR--NSQ 121
Query: 430 WLPVMPNSSH-LDAVPQATPISRSRVHNKKVRTFPLCFDDTDMTAMLENASQKQVLVPIR 606
W+P +PNSSH LDAVP +T I+R+R+ K RTFPLCFDD D + ENASQ +VLVPIR
Sbjct: 122 WVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLVPIR 181
Query: 607 LDMEIEGQKLRDTF 648
LDMEI+GQKLRD F
Sbjct: 182 LDMEIDGQKLRDAF 195
>AJ011738-1|CAA09759.1| 376|Homo sapiens Ini1b protein.
Length = 376
Score = 219 bits (536), Expect = 6e-57
Identities = 112/194 (57%), Positives = 142/194 (73%), Gaps = 5/194 (2%)
Frame = +1
Query: 82 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 258
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 259 I--DNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELATP-RESKSKKPHTPS 429
+ + G KASEVE+I++GND+KYKAVS+S E T RE K+K+
Sbjct: 64 VASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR--NSQ 121
Query: 430 WLPVMPNSSH-LDAVPQATPISRSRVHNKKVRTFPLCFDDTDMTAMLENASQKQVLVPIR 606
W+P +PNSSH LDAVP +T I+R+R+ K RTFPLCFDD D + ENASQ +VLVPIR
Sbjct: 122 WVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLVPIR 181
Query: 607 LDMEIEGQKLRDTF 648
LDMEI+GQKLRD F
Sbjct: 182 LDMEIDGQKLRDAF 195
>AB017523-1|BAC77068.1| 376|Homo sapiens Ini1 protein.
Length = 376
Score = 219 bits (536), Expect = 6e-57
Identities = 112/194 (57%), Positives = 142/194 (73%), Gaps = 5/194 (2%)
Frame = +1
Query: 82 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 258
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 259 I--DNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELATP-RESKSKKPHTPS 429
+ + G KASEVE+I++GND+KYKAVS+S E T RE K+K+
Sbjct: 64 VASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR--NSQ 121
Query: 430 WLPVMPNSSH-LDAVPQATPISRSRVHNKKVRTFPLCFDDTDMTAMLENASQKQVLVPIR 606
W+P +PNSSH LDAVP +T I+R+R+ K RTFPLCFDD D + ENASQ +VLVPIR
Sbjct: 122 WVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLVPIR 181
Query: 607 LDMEIEGQKLRDTF 648
LDMEI+GQKLRD F
Sbjct: 182 LDMEIDGQKLRDAF 195
>DQ230988-1|ABB02184.1| 385|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 385
Score = 213 bits (521), Expect = 4e-55
Identities = 113/203 (55%), Positives = 144/203 (70%), Gaps = 14/203 (6%)
Frame = +1
Query: 82 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 258
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 259 IDNGLG----PH-------XXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-PRES 402
+ + G P+ KASEVE+I++GND+KYKAVS+S E T RE
Sbjct: 64 VASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQ 123
Query: 403 KSKKPHTPSWLPVMPNSS-HLDAVPQATPISRSRVHNKKVRTFPLCFDDTDMTAMLENAS 579
K+K+ W+P +PNSS HLDAVP +T I+R+R+ K RTFPLCFDD D + ENAS
Sbjct: 124 KAKR--NSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAS 181
Query: 580 QKQVLVPIRLDMEIEGQKLRDTF 648
Q +VLVPIRLDMEI+GQKLRD F
Sbjct: 182 QPEVLVPIRLDMEIDGQKLRDAF 204
>CR456581-1|CAG30467.1| 385|Homo sapiens SMARCB1 protein.
Length = 385
Score = 213 bits (521), Expect = 4e-55
Identities = 113/203 (55%), Positives = 144/203 (70%), Gaps = 14/203 (6%)
Frame = +1
Query: 82 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 258
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 259 IDNGLG----PH-------XXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-PRES 402
+ + G P+ KASEVE+I++GND+KYKAVS+S E T RE
Sbjct: 64 VASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQ 123
Query: 403 KSKKPHTPSWLPVMPNSS-HLDAVPQATPISRSRVHNKKVRTFPLCFDDTDMTAMLENAS 579
K+K+ W+P +PNSS HLDAVP +T I+R+R+ K RTFPLCFDD D + ENAS
Sbjct: 124 KAKR--NSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAS 181
Query: 580 QKQVLVPIRLDMEIEGQKLRDTF 648
Q +VLVPIRLDMEI+GQKLRD F
Sbjct: 182 QPEVLVPIRLDMEIDGQKLRDAF 204
>AJ011737-1|CAA09758.1| 385|Homo sapiens integrase interactor 1a
protein (INI1A) protein.
Length = 385
Score = 213 bits (521), Expect = 4e-55
Identities = 113/203 (55%), Positives = 144/203 (70%), Gaps = 14/203 (6%)
Frame = +1
Query: 82 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 258
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 259 IDNGLG----PH-------XXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-PRES 402
+ + G P+ KASEVE+I++GND+KYKAVS+S E T RE
Sbjct: 64 VASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQ 123
Query: 403 KSKKPHTPSWLPVMPNSS-HLDAVPQATPISRSRVHNKKVRTFPLCFDDTDMTAMLENAS 579
K+K+ W+P +PNSS HLDAVP +T I+R+R+ K RTFPLCFDD D + ENAS
Sbjct: 124 KAKR--NSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAS 181
Query: 580 QKQVLVPIRLDMEIEGQKLRDTF 648
Q +VLVPIRLDMEI+GQKLRD F
Sbjct: 182 QPEVLVPIRLDMEIDGQKLRDAF 204
>U04847-1|AAA81905.1| 385|Homo sapiens Ini1 protein.
Length = 385
Score = 210 bits (513), Expect = 3e-54
Identities = 112/203 (55%), Positives = 143/203 (70%), Gaps = 14/203 (6%)
Frame = +1
Query: 82 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 258
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 259 IDNGLG----PH-------XXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-PRES 402
+ + G P+ KASEVE+I++GND+KYKAVS+S E T RE
Sbjct: 64 VASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQ 123
Query: 403 KSKKPHTPSWLPVMPNSS-HLDAVPQATPISRSRVHNKKVRTFPLCFDDTDMTAMLENAS 579
K+K+ W+P + NSS HLDAVP +T I+R+R+ K RTFPLCFDD D + ENAS
Sbjct: 124 KAKR--NSQWVPTLSNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAS 181
Query: 580 QKQVLVPIRLDMEIEGQKLRDTF 648
Q +VLVPIRLDMEI+GQKLRD F
Sbjct: 182 QPEVLVPIRLDMEIDGQKLRDAF 204
>AK024025-1|BAB14784.1| 394|Homo sapiens protein ( Homo sapiens
cDNA FLJ13963 fis, clone Y79AA1001299, highly similar to
Homo sapiens mRNA for integrase interactor 1b protein
(INI1B). ).
Length = 394
Score = 197 bits (481), Expect = 3e-50
Identities = 112/212 (52%), Positives = 141/212 (66%), Gaps = 23/212 (10%)
Frame = +1
Query: 82 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 258
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 259 I--DNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-PRESKSKKPHTPS 429
+ + G KASEVE+I++GND+KYKAVS+S E T RE K+K+
Sbjct: 64 VASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR--NSQ 121
Query: 430 WLPVMPNSS-HLDAVPQATPISRSRVHNKKVRTFPL-C-----------------FDDTD 552
W+P +PNSS HLDAVP +T I+R R+ K RTFPL C FDD D
Sbjct: 122 WVPTLPNSSHHLDAVPCSTTINRDRMGRDKKRTFPLWCGCIAALTLRADSALVLHFDDHD 181
Query: 553 MTAMLENASQKQVLVPIRLDMEIEGQKLRDTF 648
+ ENASQ +VLVPIRLDMEI+GQKLRD F
Sbjct: 182 PAVIHENASQPEVLVPIRLDMEIDGQKLRDAF 213
>Y17118-1|CAA76639.1| 355|Homo sapiens SNF5/INI1 protein protein.
Length = 355
Score = 174 bits (423), Expect = 3e-43
Identities = 96/175 (54%), Positives = 120/175 (68%), Gaps = 13/175 (7%)
Frame = +1
Query: 163 VGNYLRLFRGSLYKKYPGMCRRTLTNEERKRLIDNGLG----PHXXXXXXXXX------- 309
VGNYLR+FRGSLYK+YP + RR T EERK+++ + G P+
Sbjct: 2 VGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASSHGKKTKPNTKDHGYTTLATSVTLL 61
Query: 310 KASEVEDIIEGNDDKYKAVSVSQELATP-RESKSKKPHTPSWLPVMPNSSH-LDAVPQAT 483
KASEVE+I++GND+KYKAVS+S E T RE K+K+ W+P + NSSH LDAVP +T
Sbjct: 62 KASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR--NSQWVPTLSNSSHHLDAVPCST 119
Query: 484 PISRSRVHNKKVRTFPLCFDDTDMTAMLENASQKQVLVPIRLDMEIEGQKLRDTF 648
I+R+R+ K RTFPLCFDD D + ENASQ +VLVPIRLDMEI+GQKLRD F
Sbjct: 120 TINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLVPIRLDMEIDGQKLRDAF 174
>AY207470-1|AAO59166.1| 80|Homo sapiens integrase interactor 1
protein isoform D protein.
Length = 80
Score = 52.4 bits (120), Expect = 1e-06
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Frame = +1
Query: 223 RRTLTNEERKRLI--DNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-P 393
RR T EERK+++ + G KASEVE+I++GND+KYKAVS+S E T
Sbjct: 2 RRLATVEERKKIVASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYL 61
Query: 394 RESKSKK 414
RE K+K+
Sbjct: 62 REQKAKR 68
>AY207471-1|AAO59167.1| 89|Homo sapiens integrase interactor 1
protein isoform E protein.
Length = 89
Score = 47.2 bits (107), Expect = 5e-05
Identities = 23/36 (63%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Frame = +1
Query: 310 KASEVEDIIEGNDDKYKAVSVSQELAT-PRESKSKK 414
KASEVE+I++GND+KYKAVS+S E T RE K+K+
Sbjct: 42 KASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR 77
>BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein.
Length = 1481
Score = 30.3 bits (65), Expect = 6.6
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 322 VEDI-IEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATP 486
V+D+ +G D K +++ +E+ TP+E+++ + TP LP + +S +P TP
Sbjct: 492 VKDLKAQGTRDS-KPIALKEEIVTPKETETSEKETPPPLPTI--ASPPPPLPTTTP 544
>AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein.
Length = 1490
Score = 30.3 bits (65), Expect = 6.6
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 322 VEDI-IEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATP 486
V+D+ +G D K +++ +E+ TP+E+++ + TP LP + +S +P TP
Sbjct: 492 VKDLKAQGTRDS-KPIALKEEIVTPKETETSEKETPPPLPTI--ASPPPPLPTTTP 544
>AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein.
Length = 1535
Score = 30.3 bits (65), Expect = 6.6
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 322 VEDI-IEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATP 486
V+D+ +G D K +++ +E+ TP+E+++ + TP LP + +S +P TP
Sbjct: 546 VKDLKAQGTRDS-KPIALKEEIVTPKETETSEKETPPPLPTI--ASPPPPLPTTTP 598
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,589,595
Number of Sequences: 237096
Number of extensions: 2354702
Number of successful extensions: 5906
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5893
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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