Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30502
(671 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32683-10|CAA83625.1| 381|Caenorhabditis elegans Hypothetical p... 135 2e-32
Z70034-6|CAA93850.1| 301|Caenorhabditis elegans Hypothetical pr... 30 1.7
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 30 1.7
U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81553-3|CAB04493.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.0
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 29 4.0
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 29 4.0
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z70270-7|CAH04652.1| 175|Caenorhabditis elegans Hypothetical pr... 28 6.9
U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical p... 28 6.9
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ... 28 6.9
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ... 28 6.9
>Z32683-10|CAA83625.1| 381|Caenorhabditis elegans Hypothetical
protein R07E5.3 protein.
Length = 381
Score = 135 bits (327), Expect = 2e-32
Identities = 76/201 (37%), Positives = 122/201 (60%), Gaps = 7/201 (3%)
Frame = +1
Query: 67 NTTTKMALRTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEE 246
+++TK +TYG +P SF ++E G+ Y +GSE+G YLRL RG+LYKKYP + R+ T+++
Sbjct: 2 SSSTKTLSQTYGPRPQSFSLDEAGERYYIGSEIGAYLRLHRGTLYKKYPLLWRKVATSDD 61
Query: 247 RKRLIDNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELATPR-ESKSK---K 414
+ +L + +A EV+++++G+++KY+A + +TPR E S+ K
Sbjct: 62 KDKLKQIAMSNAFLHTNIMLLRAHEVDELLDGSEEKYRAAGAAP--STPRTEGASRTVAK 119
Query: 415 PHTPSWL--PVMPNSSHLDAVPQATPISRSRVHNKKVRTFPLCFDDTDMT-AMLENASQK 585
W V S HL++VP + PI+ SR K R +D +M+ +++NA +
Sbjct: 120 TPATGWAGQQVTSGSHHLESVPCSCPIAHSR-GRMKHRELVYSAEDLEMSKRVMKNAEEG 178
Query: 586 QVLVPIRLDMEIEGQKLRDTF 648
+ LVPIRLDME++G KLRDTF
Sbjct: 179 EDLVPIRLDMELDGIKLRDTF 199
>Z70034-6|CAA93850.1| 301|Caenorhabditis elegans Hypothetical
protein C18E9.6 protein.
Length = 301
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +1
Query: 445 PNSSHLDA-VPQATPISRSRVHNKKVRTFPLCFDDTDMTAMLENASQKQVLVPIRLDMEI 621
P S L + +PQ P S +H K FP CF+ + +S QV + L
Sbjct: 4 PTESELASPIPQTNPGSYEELHRKARDVFPTCFEGAKLMVNKGLSSHFQVSHTLSLSAMN 63
Query: 622 EGQKLRDTF 648
G + T+
Sbjct: 64 TGYRFGATY 72
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 367 SVSQELATPRESKSKK--PHTPSWLPVMPNSSHLDAVPQATPISRSRV 504
SV+Q P S S P PS LPV P+SS + + P A S S V
Sbjct: 1613 SVTQAPIPPASSPSAPSIPSIPSTLPVAPSSSSVPSSPSAPSESTSTV 1660
>U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical
protein T06C10.3 protein.
Length = 557
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = +1
Query: 316 SEVEDIIEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISR 495
++VE ++ + + SQEL P E KK S L V + L VP+ S
Sbjct: 76 AKVEGKVKAKVESTQNTDNSQELKAPEEKPKKKKKKKSNLIVSASVEKLSIVPEKEDFS- 134
Query: 496 SRVHNKKVRTF 528
+ KK+R F
Sbjct: 135 --ILEKKLREF 143
>Z81553-3|CAB04493.1| 136|Caenorhabditis elegans Hypothetical
protein F56H6.3 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = -2
Query: 622 QSPCPIESVQAPAFAKHSPALQSCLCHRNTVGMF----SPSYYA 503
++P P +V APA +HS + S + +R VG F SP Y A
Sbjct: 72 KAPPPASAVAAPASRRHSRRMYSEVRNRERVGRFRTTTSPHYVA 115
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/69 (26%), Positives = 25/69 (36%)
Frame = +1
Query: 310 KASEVEDIIEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPI 489
KA E+E+I E KA QE+ + K P P + P S Q P
Sbjct: 927 KAQEIEEIEESPKKSEKAPEKPQEIQEIPKKSEKAPEKPQEIEKSPKKSEKRQEIQEIPQ 986
Query: 490 SRSRVHNKK 516
+ K+
Sbjct: 987 KSEKTSEKR 995
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/69 (26%), Positives = 25/69 (36%)
Frame = +1
Query: 310 KASEVEDIIEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPI 489
KA E+E+I E KA QE+ + K P P + P S Q P
Sbjct: 925 KAQEIEEIEESPKKSEKAPEKPQEIQEIPKKSEKAPEKPQEIEKSPKKSEKRQEIQEIPQ 984
Query: 490 SRSRVHNKK 516
+ K+
Sbjct: 985 KSEKTSEKR 993
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 634 VFDPQSPCPIESVQAPAFAKHSPALQS 554
VF P+ P IE+ APA + SP L+S
Sbjct: 2745 VFSPEVPLRIETEHAPAPSTSSPPLES 2771
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 634 VFDPQSPCPIESVQAPAFAKHSPALQS 554
VF P+ P IE+ APA + SP L+S
Sbjct: 2745 VFSPEVPLRIETEHAPAPSTSSPPLES 2771
>Z70270-7|CAH04652.1| 175|Caenorhabditis elegans Hypothetical
protein C53D6.10 protein.
Length = 175
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 376 QELATPRESKSKKPHTPSW-LPVMPNSSHLDAVPQATPISRSRVHNKK 516
++ A P +S P P +P PN+ A P TP++ NKK
Sbjct: 18 EKAAIPAFPESNAPSQPEINIPQFPNAQGTGAPPPPTPLANPTEDNKK 65
>U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical
protein R144.2a protein.
Length = 823
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2
Query: 625 PQSPCPIESVQAPAFAKHSPA 563
PQ P PI VQAP +H PA
Sbjct: 374 PQDPAPIVPVQAPPPQQHLPA 394
>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
protein Y47D3B.5b protein.
Length = 1136
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 364 VSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISRSRVH 507
VS+ ++L + KSKK + S P+ PNS H + TP+ ++ VH
Sbjct: 732 VSLCEDLKASK--KSKKSRSISSSPIPPNSLHEEET--QTPLRQNMVH 775
>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
protein Y47D3B.5a protein.
Length = 1088
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 364 VSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISRSRVH 507
VS+ ++L + KSKK + S P+ PNS H + TP+ ++ VH
Sbjct: 732 VSLCEDLKASK--KSKKSRSISSSPIPPNSLHEEET--QTPLRQNMVH 775
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,195,516
Number of Sequences: 27780
Number of extensions: 356049
Number of successful extensions: 972
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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