Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30502
         (671 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g11690.1 68416.m01433 expressed protein                             33   0.23 
At3g17590.1 68416.m02245 transcription regulatory protein SNF5, ...    31   0.53 
At1g08310.1 68414.m00917 esterase/lipase/thioesterase family pro...    30   1.2  
At5g11530.1 68418.m01345 embryonic flower 1 (EMF1) identical to ...    29   2.1  
At1g70620.1 68414.m08138 cyclin-related contains weak similarity...    29   2.8  
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro...    29   3.7  
At3g07020.2 68416.m00834 UDP-glucose:sterol glucosyltransferase ...    28   4.9  
At3g07020.1 68416.m00833 UDP-glucose:sterol glucosyltransferase ...    28   4.9  
At1g32840.1 68414.m04047 Ulp1 protease family protein similar to...    28   4.9  
At4g29210.2 68417.m04178 gamma-glutamyltranspeptidase family pro...    28   6.5  
At3g48160.2 68416.m05253 transcription factor, putative / E2F-li...    28   6.5  
At3g48160.1 68416.m05252 transcription factor, putative / E2F-li...    28   6.5  
At3g44500.1 68416.m04783 Ulp1 protease family protein similar to...    27   8.6  
At1g62600.1 68414.m07062 flavin-containing monooxygenase family ...    27   8.6  

>At3g11690.1 68416.m01433 expressed protein
          Length = 252

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +1

Query: 193 SLYKKYPGMCRRTLTNEERKRLIDNGLGP 279
           ++YK   G+CRR + +  RK+L+ NG+ P
Sbjct: 83  AIYKVPKGICRRAIRSRRRKQLVKNGILP 111


>At3g17590.1 68416.m02245 transcription regulatory protein SNF5,
           putative (BSH) identical to SNF5 homolog BSH GI:1843628
           from [Arabidopsis thaliana]
          Length = 240

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +1

Query: 592 LVPIRLDMEIEGQKLRDTF 648
           LVPIRLD++ EGQ+ +D F
Sbjct: 23  LVPIRLDIQFEGQRYKDAF 41


>At1g08310.1 68414.m00917 esterase/lipase/thioesterase family
           protein contains Interpro entry IPR000379
          Length = 315

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
 Frame = +1

Query: 1   NFTPTKLTLQFLKLM*LFYQRN-----NTTTKMALRTYGDK--PISFQIEEGGDFYCVGS 159
           NF+ +K  ++ L++  LFY R+     ++ TK +L +  +    ++ Q+E G  FY +G 
Sbjct: 48  NFSASKELIEELEVYLLFYDRSGYGASDSNTKRSLESEVEDIAELADQLELGPKFYLIGI 107

Query: 160 EVGNY 174
            +G+Y
Sbjct: 108 SMGSY 112


>At5g11530.1 68418.m01345 embryonic flower 1 (EMF1) identical to
            embryonic flower 1 [Arabidopsis thaliana] GI:15430697
          Length = 1096

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = +1

Query: 109  PISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERK 252
            P  F I E G+ Y +    G +L++ + + +KK P +C++    + +K
Sbjct: 1043 PADFTIPEPGNVYML---TGEHLKVRKRTTFKKKPAVCKQDAMKQTKK 1087


>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
            Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide I)
            [Bos taurus]
          Length = 897

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/63 (25%), Positives = 30/63 (47%)
 Frame = +1

Query: 337  EGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISRSRVHNKK 516
            E +DD  +  S  ++  +P   KS++ H  S  P   +S H + +  +   SRS+    +
Sbjct: 828  ESSDDSKRKSSSKRKNRSPSPGKSRRRHVSSRSPHSKHSQHKNTLYSSHDKSRSKRSRSR 887

Query: 517  VRT 525
             R+
Sbjct: 888  SRS 890


>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
           protein GI:1279562 from [Medicago sativa]
          Length = 557

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 20/62 (32%), Positives = 28/62 (45%)
 Frame = +1

Query: 325 EDIIEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISRSRV 504
           ED  E  ++  K  S   E+    +S +K+P TPS  P    S  L A   +  I R+ V
Sbjct: 255 EDESEDEEETPKKKSSDVEMVDAEKSSAKQPKTPS-TPAAGGSKTLFAANLSFNIERADV 313

Query: 505 HN 510
            N
Sbjct: 314 EN 315


>At3g07020.2 68416.m00834 UDP-glucose:sterol glucosyltransferase
           (UGT80A2) identical to UDP-glucose:sterol
           glucosyltransferase [Arabidopsis thaliana] GI:2462931;
           contains Pfam profile: PF03033 glycosyltransferase
           family 28 N-terminal domain
          Length = 637

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +3

Query: 360 SSVRQPRIGDTP*EQKQEATHSIMAASHAKLF 455
           SS  QPR+  +  E++Q+ TH I+A   AK+F
Sbjct: 97  SSTNQPRLDKSKTERQQKVTH-ILAEDAAKIF 127


>At3g07020.1 68416.m00833 UDP-glucose:sterol glucosyltransferase
           (UGT80A2) identical to UDP-glucose:sterol
           glucosyltransferase [Arabidopsis thaliana] GI:2462931;
           contains Pfam profile: PF03033 glycosyltransferase
           family 28 N-terminal domain
          Length = 637

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +3

Query: 360 SSVRQPRIGDTP*EQKQEATHSIMAASHAKLF 455
           SS  QPR+  +  E++Q+ TH I+A   AK+F
Sbjct: 97  SSTNQPRLDKSKTERQQKVTH-ILAEDAAKIF 127


>At1g32840.1 68414.m04047 Ulp1 protease family protein similar to
           At4g04010, At2g06430, At2g15140, At2g04980, At2g14130,
           At3g44500, At2g15190, At3g47260, At5g34900, At3g29210,
           At2g02210, At3g32900
          Length = 611

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
 Frame = +1

Query: 325 EDIIEGNDDKYKAVSVSQELATPRESKSKKPH--TPSWLPVMPNSSHLDAVPQATPISRS 498
           ED I   + +Y +     E  T R+ KS  P   TPS+  +   S  LD       +SR 
Sbjct: 216 EDSIREPNTQYGSYPGDDE-NTQRDDKSPTPRSSTPSFNILSEES--LDVQKDKKRVSRG 272

Query: 499 RVHNKKVRTFPLCFDDTDMTAMLENASQKQV 591
           R  NK+V+      D+      +    QKQV
Sbjct: 273 RNENKRVKPSVHAEDNLKTRKQVPRKRQKQV 303


>At4g29210.2 68417.m04178 gamma-glutamyltranspeptidase family
           protein similar to SP|P07314
           Gamma-glutamyltranspeptidase precursor (EC 2.3.2.2)
           (Gamma- glutamyltransferase) (GGT) {Rattus norvegicus};
           contains Pfam profilePF01019:
           Gamma-glutamyltranspeptidase
          Length = 512

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = +1

Query: 421 TPSWLPVMPNS---SHLDAVPQATPISRSRVHNKKVRTFPLCFD 543
           TP  LP  P +    +   +   TP+  ++VHN+ + TFP+ ++
Sbjct: 468 TPDMLPPAPTNFIEPNKRPLSSMTPLVITKVHNQYISTFPVIYN 511


>At3g48160.2 68416.m05253 transcription factor, putative / E2F-like
           repressor E2L3 (E2L3) identical to E2F-like repressor
           E2L3 [Arabidopsis thaliana] GI:20502508
          Length = 403

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +1

Query: 328 DIIEGNDDKYKAVSVSQELATPRESKSKKPHTP 426
           DI   N  + K+ S SQE AT R  K KK  TP
Sbjct: 276 DITNVNVKRSKSSSSSQENATERRLKMKKHSTP 308


>At3g48160.1 68416.m05252 transcription factor, putative / E2F-like
           repressor E2L3 (E2L3) identical to E2F-like repressor
           E2L3 [Arabidopsis thaliana] GI:20502508
          Length = 379

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +1

Query: 328 DIIEGNDDKYKAVSVSQELATPRESKSKKPHTP 426
           DI   N  + K+ S SQE AT R  K KK  TP
Sbjct: 276 DITNVNVKRSKSSSSSQENATERRLKMKKHSTP 308


>At3g44500.1 68416.m04783 Ulp1 protease family protein similar to
           At1g32840, At4g04010, At2g06430, At2g15140, At2g04980,
           At2g14130, At2g15190, At3g47260, At5g34900, At3g29210,
           At2g02210, At3g32900
          Length = 805

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
 Frame = +1

Query: 346 DDKYKAVSVSQELATPRESKSKKPHTPSWLPVMP--NSSHLDAVPQATPISRSRVHNKKV 519
           DD+     V  EL     SK K P   S  P     +   LD       +SR R  NK+V
Sbjct: 434 DDENTQRDVGDELVE-ESSKDKSPTPRSSTPNFNILSEESLDVQKDKKRVSRGRNENKRV 492

Query: 520 RTFPLCFDDTDMTAMLENASQKQV 591
           +      D+  +   +    QKQV
Sbjct: 493 KPSVHAEDNLKIRKQVPRKRQKQV 516


>At1g62600.1 68414.m07062 flavin-containing monooxygenase family
           protein / FMO family protein low similarity to
           flavin-containing monooxygenase 2 from Cavia porcellus
           [SP|P36366]; contains Pfam profile PF00743
           Flavin-binding monooxygenase-like
          Length = 452

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 174 PALVPWVTLQEVPWHVPAYP 233
           PA  PW++   +PW V  +P
Sbjct: 321 PAFAPWLSFVGIPWKVVPFP 340


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,214,646
Number of Sequences: 28952
Number of extensions: 328008
Number of successful extensions: 951
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)