Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30497
         (307 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT019345-1|AAV38152.1|  207|Homo sapiens ubiquitin-conjugating e...    28   6.1  
BC092407-1|AAH92407.1|  207|Homo sapiens ubiquitin-conjugating e...    28   6.1  
BC003554-1|AAH03554.1|  207|Homo sapiens ubiquitin-conjugating e...    28   6.1  
AC104076-1|AAY14882.1|  207|Homo sapiens unknown protein.              28   6.1  
AB017644-1|BAA76544.1|  207|Homo sapiens ubiquitin-conjugating e...    28   6.1  
BC022332-1|AAH22332.1|  201|Homo sapiens ubiquitin-conjugating e...    27   8.1  
AK057886-1|BAB71605.1|  201|Homo sapiens protein ( Homo sapiens ...    27   8.1  

>BT019345-1|AAV38152.1|  207|Homo sapiens ubiquitin-conjugating
           enzyme E2E 3 (UBC4/5 homolog, yeast) protein.
          Length = 207

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -1

Query: 274 NNY*FK*NLIKFNTTQYNCNI*SFRTKIL*ILKDRTQP 161
           ++Y FK   + F T  Y+CNI S     L ILKD   P
Sbjct: 118 SDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 155


>BC092407-1|AAH92407.1|  207|Homo sapiens ubiquitin-conjugating
           enzyme E2E 3 (UBC4/5 homolog, yeast) protein.
          Length = 207

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -1

Query: 274 NNY*FK*NLIKFNTTQYNCNI*SFRTKIL*ILKDRTQP 161
           ++Y FK   + F T  Y+CNI S     L ILKD   P
Sbjct: 118 SDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 155


>BC003554-1|AAH03554.1|  207|Homo sapiens ubiquitin-conjugating
           enzyme E2E 3 (UBC4/5 homolog, yeast) protein.
          Length = 207

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -1

Query: 274 NNY*FK*NLIKFNTTQYNCNI*SFRTKIL*ILKDRTQP 161
           ++Y FK   + F T  Y+CNI S     L ILKD   P
Sbjct: 118 SDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 155


>AC104076-1|AAY14882.1|  207|Homo sapiens unknown protein.
          Length = 207

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -1

Query: 274 NNY*FK*NLIKFNTTQYNCNI*SFRTKIL*ILKDRTQP 161
           ++Y FK   + F T  Y+CNI S     L ILKD   P
Sbjct: 118 SDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 155


>AB017644-1|BAA76544.1|  207|Homo sapiens ubiquitin-conjugating
           enzyme E2 protein.
          Length = 207

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -1

Query: 274 NNY*FK*NLIKFNTTQYNCNI*SFRTKIL*ILKDRTQP 161
           ++Y FK   + F T  Y+CNI S     L ILKD   P
Sbjct: 118 SDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 155


>BC022332-1|AAH22332.1|  201|Homo sapiens ubiquitin-conjugating
           enzyme E2E 2 (UBC4/5 homolog, yeast) protein.
          Length = 201

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -1

Query: 271 NY*FK*NLIKFNTTQYNCNI*SFRTKIL*ILKDRTQP 161
           +Y FK   + F T  Y+CNI S     L ILKD   P
Sbjct: 113 DYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 149


>AK057886-1|BAB71605.1|  201|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25157 fis, clone CBR08008, highly similar to
           UBIQUITIN-CONJUGATING ENZYME E2-23 KDA (EC 6.3.2.19). ).
          Length = 201

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -1

Query: 271 NY*FK*NLIKFNTTQYNCNI*SFRTKIL*ILKDRTQP 161
           +Y FK   + F T  Y+CNI S     L ILKD   P
Sbjct: 113 DYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 149


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,960,374
Number of Sequences: 237096
Number of extensions: 407255
Number of successful extensions: 454
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1342408202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)