Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30497
         (307 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X92663-1|CAA63351.1|  232|Drosophila melanogaster ubiquitin-conj...    27   4.5  
AY094899-1|AAM11252.1|  232|Drosophila melanogaster RE74673p pro...    27   4.5  
AE014134-1951|AAN10762.1|  232|Drosophila melanogaster CG6720-PB...    27   4.5  
AE014134-1950|AAF53008.1|  232|Drosophila melanogaster CG6720-PA...    27   4.5  

>X92663-1|CAA63351.1|  232|Drosophila melanogaster
           ubiquitin-conjugating enzyme UbcD2 protein.
          Length = 232

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = -1

Query: 268 Y*FK*NLIKFNTTQYNCNI*SFRTKIL*ILKDRTQP 161
           Y FK   + F T  Y+CNI S     L ILKD   P
Sbjct: 145 YPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 180


>AY094899-1|AAM11252.1|  232|Drosophila melanogaster RE74673p
           protein.
          Length = 232

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = -1

Query: 268 Y*FK*NLIKFNTTQYNCNI*SFRTKIL*ILKDRTQP 161
           Y FK   + F T  Y+CNI S     L ILKD   P
Sbjct: 145 YPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 180


>AE014134-1951|AAN10762.1|  232|Drosophila melanogaster CG6720-PB,
           isoform B protein.
          Length = 232

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = -1

Query: 268 Y*FK*NLIKFNTTQYNCNI*SFRTKIL*ILKDRTQP 161
           Y FK   + F T  Y+CNI S     L ILKD   P
Sbjct: 145 YPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 180


>AE014134-1950|AAF53008.1|  232|Drosophila melanogaster CG6720-PA,
           isoform A protein.
          Length = 232

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = -1

Query: 268 Y*FK*NLIKFNTTQYNCNI*SFRTKIL*ILKDRTQP 161
           Y FK   + F T  Y+CNI S     L ILKD   P
Sbjct: 145 YPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 180


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,997,398
Number of Sequences: 53049
Number of extensions: 130986
Number of successful extensions: 196
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 568694034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)