Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30489
(368 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 53 6e-08
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943... 52 1e-07
07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177... 47 5e-06
02_02_0078 + 6587491-6588021,6588160-6589151,6592430-6592607,659... 41 3e-04
04_01_0612 + 8036625-8036751,8036917-8037110,8037463-8038230 31 0.28
08_02_0104 + 12404890-12405129,12405244-12405333,12405953-124060... 31 0.37
03_02_0091 + 5574528-5577254 30 0.65
02_01_0473 - 3403547-3404241,3404455-3404983,3405299-3405477,340... 30 0.65
04_03_0658 + 18447986-18448117,18448204-18448317,18448388-184485... 29 0.86
01_01_0753 - 5814087-5814344,5814461-5814646,5814847-5815004,581... 29 0.86
09_06_0111 - 20924838-20924969,20925147-20925290,20925391-209254... 29 1.5
02_05_0525 + 29764176-29764518,29765351-29765679 28 2.0
11_01_0285 - 2115051-2115146,2115220-2115306,2115417-2115503,211... 27 4.6
02_02_0604 - 12064451-12065683,12065729-12065827,12065858-120659... 27 4.6
12_01_0024 + 178539-179418,179593-179938,180127-180244 27 6.1
04_04_1465 + 33794225-33794389,33794471-33794597,33794669-337947... 27 6.1
04_04_0258 + 23988409-23989580,23990450-23990851,23991138-23991204 26 8.1
03_06_0599 + 34984869-34985319,34986581-34987563 26 8.1
01_01_0134 - 1224084-1224269,1224578-1224662,1224763-1225050,122... 26 8.1
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 53.2 bits (122), Expect = 6e-08
Identities = 32/86 (37%), Positives = 44/86 (51%)
Frame = +2
Query: 23 KGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDT 202
K + L + LD AKAFD V ++L L G P+ WI + L V++ G
Sbjct: 33 KCQTLIIKLDFAKAFDSVNWQSLFQILSVKGFPDNWISWIKNLLQTSKSAVLLHGIPGKW 92
Query: 203 MTINAGVPQGSVLSPTLFILYINDML 280
+T G+ QG LSP LFIL + D+L
Sbjct: 93 ITCKKGLRQGDPLSPYLFIL-VADVL 117
>06_02_0297 -
13891954-13892556,13893019-13893855,13894179-13894394,
13895455-13895874,13896198-13896506
Length = 794
Score = 52.0 bits (119), Expect = 1e-07
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = +2
Query: 17 ESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCS 196
+SK E + + LD KAFD + H A+LS + G P +W+ S V+++G
Sbjct: 446 QSKREIVLLKLDFEKAFDTIEHSAILSVMQHMGFPLKWIEWVQMVFSTASSAVLLNGVPG 505
Query: 197 DTMTINAGVPQGSVLSPTLFIL 262
++ GV QG LS LF+L
Sbjct: 506 NSFKCRRGVRQGVPLSLLLFVL 527
>07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,
1778770-1778900,1779530-1779788,1779823-1780098,
1780100-1781352
Length = 1344
Score = 46.8 bits (106), Expect = 5e-06
Identities = 30/86 (34%), Positives = 40/86 (46%)
Frame = +2
Query: 23 KGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDT 202
K + + V LD KAFD V +L L G PE WI L V+++G
Sbjct: 1048 KCQTIIVKLDFTKAFDSVIWSSLFKILAVRGFPENWISWIKGLLSSSKSAVLLNGVPGRW 1107
Query: 203 MTINAGVPQGSVLSPTLFILYINDML 280
+ G+ QG LS LFIL + D+L
Sbjct: 1108 ICCKKGLLQGDPLSSYLFIL-VADVL 1132
>02_02_0078 +
6587491-6588021,6588160-6589151,6592430-6592607,
6592635-6592794,6592992-6593158,6593246-6593869
Length = 883
Score = 40.7 bits (91), Expect = 3e-04
Identities = 21/81 (25%), Positives = 40/81 (49%)
Frame = +2
Query: 20 SKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSD 199
+K A+ +D+ KA+DR+ L L G + + + + ++G+ +D
Sbjct: 248 NKKPFFALKIDMMKAYDRIEWSYLHGCLMRLGFEQDWINTVMRCVTSTRYAIRINGELTD 307
Query: 200 TMTINAGVPQGSVLSPTLFIL 262
T+ + G+ QG +SP LF+L
Sbjct: 308 TVVPSRGIRQGDPISPYLFLL 328
>04_01_0612 + 8036625-8036751,8036917-8037110,8037463-8038230
Length = 362
Score = 31.1 bits (67), Expect = 0.28
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 185 RLQRP*CSAHPKS*RSTCRDPRGFRKMVTSIEVPYARPCRRPS 57
R+++ +A P S C DP+ ++ I V Y+ CR PS
Sbjct: 21 RVKKKRAAASPNSEDGYCADPKKLNALIEDIFVCYSLSCREPS 63
>08_02_0104 + 12404890-12405129,12405244-12405333,12405953-12406036,
12406888-12407132,12409032-12409095,12409270-12409968,
12410063-12410176,12410287-12410418,12410594-12410770,
12411085-12411138,12411230-12411292,12411396-12412307,
12412408-12412535,12413680-12413962
Length = 1094
Score = 30.7 bits (66), Expect = 0.37
Identities = 19/95 (20%), Positives = 38/95 (40%)
Frame = +2
Query: 20 SKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSD 199
S E + ++ D +H + + G+ + L W A +G + +V D +CS
Sbjct: 886 SNSEDMLSPAELPFMIDLDYHTQIEYRWGGEGLRKTLICWAAEKSEGGQVVLVEDEECSS 945
Query: 200 TMTINAGVPQGSVLSPTLFILYINDMLSIDGMHCY 304
T I+ V + P + + + I + C+
Sbjct: 946 TYCISFRVKNAEAVPP---VKELRKTMRIQALRCH 977
>03_02_0091 + 5574528-5577254
Length = 908
Score = 29.9 bits (64), Expect = 0.65
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = +2
Query: 14 LESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDC 193
L++ G+ AV K D + HR L LP G P+ + I L S +++DG
Sbjct: 212 LDAPGDCAAVG----KMQDAMAHRLGLCALPDGGAPDHRARPIFEVLRDSSFLLLLDGVT 267
Query: 194 SDTMTINAGVP 226
++ GVP
Sbjct: 268 KPVDLVDIGVP 278
>02_01_0473 -
3403547-3404241,3404455-3404983,3405299-3405477,
3405868-3405952,3406136-3406482,3407061-3407159,
3408135-3408636
Length = 811
Score = 29.9 bits (64), Expect = 0.65
Identities = 30/82 (36%), Positives = 37/82 (45%)
Frame = +2
Query: 38 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINA 217
A+ LD++KA+DRV L L G + KW S C D I
Sbjct: 235 ALKLDLSKAYDRVDWAFLDGVLQRMGFGDTWRKWTMS--------------CVDICPIR- 279
Query: 218 GVPQGSVLSPTLFILYINDMLS 283
G+ QG LSP LF L+I D LS
Sbjct: 280 GLRQGDPLSPYLF-LFIADGLS 300
>04_03_0658 +
18447986-18448117,18448204-18448317,18448388-18448507,
18448589-18449215,18449289-18449462,18449545-18449809,
18449889-18449959,18450043-18450145,18450221-18450280,
18450533-18450744,18450830-18450901,18451446-18451502,
18451598-18451882,18452359-18452371,18452396-18452463,
18452649-18452747,18452836-18452967,18453038-18453141,
18453234-18453423,18453519-18453524
Length = 967
Score = 29.5 bits (63), Expect = 0.86
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = +2
Query: 41 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGD----CSDTMT 208
+S+ + R ++LL+ S+ +P WIA+ +D S +VVD D +
Sbjct: 151 LSVHDKEVIGRTCFKSLLNFQSSF-VPNQFASWIANHVDVSSSDIVVDDKVIPLTEDCVH 209
Query: 209 INAGVPQGSVLSPTLFILYINDMLSIDG 292
I G+P G + + F L N +L G
Sbjct: 210 IILGLPVGGIEISSNFELGKNKILETFG 237
>01_01_0753 -
5814087-5814344,5814461-5814646,5814847-5815004,
5815082-5815214,5815299-5815489,5815826-5816281,
5816543-5816661,5816729-5816872,5816994-5817065,
5817368-5817500,5817598-5817733
Length = 661
Score = 29.5 bits (63), Expect = 0.86
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 98 KLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSD 199
KLP + +C W A +L G+S + +VD +
Sbjct: 563 KLPEADDQKSMCNWAAEYLKGKSYSKLVDASLKE 596
>09_06_0111 -
20924838-20924969,20925147-20925290,20925391-20925453,
20925993-20926116,20926779-20927005,20927088-20927255,
20927348-20927498,20927567-20927889
Length = 443
Score = 28.7 bits (61), Expect = 1.5
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -2
Query: 352 ETLMADISRIPRAIICIAMHSINRQHVIDIQDEKRGGEHRTLWNASVNGHGIRTVTVY 179
+ + A ++R P A+ S + + QDEK G TL GH I T T Y
Sbjct: 282 KNMPALLAREPSALAYAIKRSCENKAEVVAQDEKESGLRATLNLGHTFGHAIETGTGY 339
>02_05_0525 + 29764176-29764518,29765351-29765679
Length = 223
Score = 28.3 bits (60), Expect = 2.0
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +2
Query: 5 AEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVV 178
AE + +G AV+ D+ A R RA L+ G E +C+W+A L+ R + +V
Sbjct: 55 AEGVARRGYR-AVTFDMRGA-GRSTGRASLTGSTEVGDVEAVCRWVADNLNPRGVLLV 110
>11_01_0285 -
2115051-2115146,2115220-2115306,2115417-2115503,
2115724-2115809,2115889-2115992,2117447-2117533,
2117621-2117744,2118420-2118538,2118626-2118755,
2118902-2118990,2119122-2119210,2119985-2120078,
2120187-2120266,2120363-2120452,2121195-2121281,
2121381-2121425,2121847-2121923,2121997-2122102,
2122258-2122339,2122430-2122501,2122502-2122585,
2123007-2123084,2123155-2123224,2123737-2123851
Length = 725
Score = 27.1 bits (57), Expect = 4.6
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +2
Query: 86 ALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLFILY 265
A+ S L +GIPEG C I + R ++VD C+ ++ VP L P + +
Sbjct: 155 AIGSGLIYHGIPEGAC--IGLYFINRPEWIIVDHACAAYSFVS--VPLYDTLGPDA-VQF 209
Query: 266 INDMLSIDGMHC 301
I + +++ + C
Sbjct: 210 IVNHATVEAIFC 221
>02_02_0604 -
12064451-12065683,12065729-12065827,12065858-12065955,
12066782-12066924,12067233-12067729
Length = 689
Score = 27.1 bits (57), Expect = 4.6
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 131 CKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLFIL 262
CK + L+ I + +G SD G+ QG LSP LF+L
Sbjct: 205 CKKLRYLLEETRIDI--NGTLSDPFKPMRGLRQGDPLSPLLFVL 246
>12_01_0024 + 178539-179418,179593-179938,180127-180244
Length = 447
Score = 26.6 bits (56), Expect = 6.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 164 SITVVVDGDCSDTMTINAGVPQGSVLSPTLFIL 262
S V+++G ++ GV QG LSP LF+L
Sbjct: 7 SSAVLLNGVPGNSFKCRRGVRQGDPLSPLLFVL 39
>04_04_1465 +
33794225-33794389,33794471-33794597,33794669-33794799,
33795153-33795254,33795337-33795420,33795504-33795731,
33795934-33796038,33796376-33796731,33797146-33797303,
33797399-33797505,33797852-33798061
Length = 590
Score = 26.6 bits (56), Expect = 6.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -3
Query: 285 IDSMSLIYRMKSVGESTEPCGTPALMVMVSEQSPSTTTVMLRPSKKL 145
ID +SLI + G + A ++ +++P T VML+ S K+
Sbjct: 476 IDRVSLILTLGGTGFTPRDVTPEATKSVIEKEAPGLTYVMLQESLKI 522
>04_04_0258 + 23988409-23989580,23990450-23990851,23991138-23991204
Length = 546
Score = 26.2 bits (55), Expect = 8.1
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -1
Query: 116 FRKMVTSIEVPYARPCRRPSRYQGSQQEPRPCSPRLQ 6
+RKM T IE +RP S S RP SP Q
Sbjct: 305 WRKMETEIEQKTSRPTSSQSSRPNSAHSSRPGSPGSQ 341
>03_06_0599 + 34984869-34985319,34986581-34987563
Length = 477
Score = 26.2 bits (55), Expect = 8.1
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 252 SVGESTEPCGTPALMVMVSEQSPSTTTVML 163
S+G PCG MVS +SPS T +
Sbjct: 446 SIGTRFVPCGVCKAFSMVSVKSPSVATTWI 475
>01_01_0134 -
1224084-1224269,1224578-1224662,1224763-1225050,
1225114-1225334,1225511-1225642,1226218-1226494,
1226722-1226770,1226993-1227088,1227779-1227911,
1228241-1228391,1228484-1228674,1229167-1229382
Length = 674
Score = 26.2 bits (55), Expect = 8.1
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 197 DTMTINAGVPQGSVLSPTLFILYINDMLSIDGMHCYADDSTGDARYIG 340
+T+++ A + L+P Y+ND+L G+ AD GDA+ G
Sbjct: 154 ETLSLAAELQLRRTLTPERKESYVNDLLFRLGLVNCADSIVGDAKVRG 201
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,980,358
Number of Sequences: 37544
Number of extensions: 273700
Number of successful extensions: 827
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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