Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30489
(368 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 74 3e-14
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 65 2e-11
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 59 1e-09
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 58 1e-09
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 46 1e-05
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 31 0.26
AL117203-21|CAN86632.1| 171|Caenorhabditis elegans Hypothetical... 31 0.34
AL117203-20|CAB55118.1| 244|Caenorhabditis elegans Hypothetical... 31 0.34
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 31 0.34
AF016443-7|AAK68184.1| 285|Caenorhabditis elegans Hypothetical ... 29 1.4
AF016443-6|AAK68185.1| 257|Caenorhabditis elegans Hypothetical ... 29 1.4
AC024771-2|AAK70659.1| 697|Caenorhabditis elegans Hypothetical ... 28 1.8
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 28 2.4
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 27 3.2
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 27 3.2
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 27 3.2
U80840-2|AAK68305.1| 336|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z81077-14|CAN99679.1| 662|Caenorhabditis elegans Hypothetical p... 27 5.5
Z81077-2|CAD56583.2| 656|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z81077-1|CAB03066.2| 658|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z72504-6|CAA96604.2| 906|Caenorhabditis elegans Hypothetical pr... 26 7.3
Z71266-9|CAD24483.1| 489|Caenorhabditis elegans Hypothetical pr... 26 7.3
U28943-1|AAA68356.1| 635|Caenorhabditis elegans Hypothetical pr... 26 7.3
AY013955-1|AAG59937.1| 27|Caenorhabditis elegans LINE-like rev... 26 7.3
AB040992-1|BAB21560.1| 489|Caenorhabditis elegans CeCRMP/DHP-1 ... 26 7.3
U97196-9|AAB52454.1| 141|Caenorhabditis elegans Hypothetical pr... 26 9.7
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 74.1 bits (174), Expect = 3e-14
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Frame = +2
Query: 2 WAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVV 181
W ++++ + + LD +KAFDR+ H LL KL S + L W+ FL RS V +
Sbjct: 4 WTKSIDHGEQIDIIYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRI 63
Query: 182 DGDCSDTMTINAGVPQGSVLSPTLFILYINDMLSI--DGMHC--YADDS 316
S GVPQG+VLSP LF +Y+ND+ SI + + C +ADD+
Sbjct: 64 GQTLSSRKFATCGVPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDT 112
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 64.9 bits (151), Expect = 2e-11
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +2
Query: 59 KAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM-TINAGVPQGS 235
KAFD+V H LL KL +GI C W FL R+ +V V+ + I++GVP+GS
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 236 VLSPTLFILYINDML 280
V P LF+++IN +L
Sbjct: 62 VSGPFLFLIFINSLL 76
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 58.8 bits (136), Expect = 1e-09
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Frame = +2
Query: 32 ALAVSLDIAKAFDRVWHRALLSKL-PSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMT 208
A+ LD+ AFD+V + L + L + GI + W+ ++L R I D S T
Sbjct: 469 AIMACLDLRAAFDKVPTKKLCNDLMEAQGIEPKIKLWLGNYLHKRLIRTSHDNHWSKWHT 528
Query: 209 INAGVPQGSVLSPTLFILYINDMLSIDG--MHCYADDSTGDAR 331
+ GVPQGSV+SP LF Y+ DM + + YADD + AR
Sbjct: 529 LLGGVPQGSVISPNLFTFYLKDMPTQQDTMLISYADDMSIIAR 571
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 58.4 bits (135), Expect = 1e-09
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Frame = +2
Query: 98 KLPSYGIPEGLCKWIASFLDGRSITVVVDGDCS-DTMTINAGVPQGSVLSPTLFILYIND 274
KL +G+ C W FL+ R+ +V ++ S ++ I++GVPQGSV P LFIL+IN+
Sbjct: 839 KLAKFGLDSLTCSWYKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLFILFINN 898
Query: 275 MLSID-----GMHCYADD 313
+L ID + C+ADD
Sbjct: 899 LL-IDLAPTINISCFADD 915
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 45.6 bits (103), Expect = 1e-05
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +2
Query: 2 WAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVV 181
+ E +E+ + ++ AFD+V H L+SKL + + L W + ++ +V V
Sbjct: 877 YEEYVEAHKRVDLIHFKLSTAFDKVPHEFLISKLNDFNVHPTLRNWFRKLMSPKTFSVQV 936
Query: 182 DGDC-SDTMTINAGVPQGSVLSPTLFILYINDML 280
+ S+ G P+GS +F+++IN +L
Sbjct: 937 NDHLESEKHNCQIGAPRGSESRQFMFLVFINSLL 970
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 31.1 bits (67), Expect = 0.26
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 276 MSLIYRMKSVGESTEPCGTPALMVMVSEQ 190
+SL KS GE T+PCGTP + SE+
Sbjct: 50 ISLTNMPKSTGERTDPCGTPHTAFLGSEK 78
>AL117203-21|CAN86632.1| 171|Caenorhabditis elegans Hypothetical
protein Y48C3A.18b protein.
Length = 171
Score = 30.7 bits (66), Expect = 0.34
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +3
Query: 195 LIP*PLTLAFHKVRCSPPRFSSCISMTCCLLMECIAMQMIAR 320
L+P P+TL F ++ C P F+ + C + +C + I +
Sbjct: 17 LLPGPVTLMFERLPCLPAEFNPGVVNVACRVPDCPIVSTICK 58
>AL117203-20|CAB55118.1| 244|Caenorhabditis elegans Hypothetical
protein Y48C3A.18a protein.
Length = 244
Score = 30.7 bits (66), Expect = 0.34
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +3
Query: 195 LIP*PLTLAFHKVRCSPPRFSSCISMTCCLLMECIAMQMIAR 320
L+P P+TL F ++ C P F+ + C + +C + I +
Sbjct: 90 LLPGPVTLMFERLPCLPAEFNPGVVNVACRVPDCPIVSTICK 131
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 30.7 bits (66), Expect = 0.34
Identities = 22/72 (30%), Positives = 29/72 (40%)
Frame = +2
Query: 41 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAG 220
V +D KAFD V H+A+ L G E + T T+ + G
Sbjct: 40 VFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYK-NCTTNFTPFLRPITVPVTKG 98
Query: 221 VPQGSVLSPTLF 256
V QG +SP LF
Sbjct: 99 VRQGDPISPNLF 110
>AF016443-7|AAK68184.1| 285|Caenorhabditis elegans Hypothetical
protein C17E7.9a protein.
Length = 285
Score = 28.7 bits (61), Expect = 1.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 55 REGLRQGLA*GTSIEVTILRNPR 123
RE + +GLA GT + T+ R PR
Sbjct: 246 RENVHEGLADGTQVTTTVFRGPR 268
>AF016443-6|AAK68185.1| 257|Caenorhabditis elegans Hypothetical
protein C17E7.9b protein.
Length = 257
Score = 28.7 bits (61), Expect = 1.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 55 REGLRQGLA*GTSIEVTILRNPR 123
RE + +GLA GT + T+ R PR
Sbjct: 218 RENVHEGLADGTQVTTTVFRGPR 240
>AC024771-2|AAK70659.1| 697|Caenorhabditis elegans Hypothetical
protein Y40B10A.4 protein.
Length = 697
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Frame = -1
Query: 92 EVPYARPCRRPSRYQGSQQE----PRPCSPRLQP 3
E P R R+PSR+ S + P PCSP P
Sbjct: 340 ENPPVRDSRKPSRFSASHADKKHYPAPCSPDANP 373
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 27.9 bits (59), Expect = 2.4
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -1
Query: 185 RLQRP*CSAHPKS*RSTCRDPRGFRKMVTSIEVPYARPCRRPSRYQGSQQEPRPCSPR 12
R +RP + P R+ C P G + P PC+RP Q Q +P+P R
Sbjct: 84 RNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRP---QPPQPQPQPYPQR 138
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 27.9 bits (59), Expect = 2.4
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -1
Query: 185 RLQRP*CSAHPKS*RSTCRDPRGFRKMVTSIEVPYARPCRRPSRYQGSQQEPRPCSPR 12
R +RP + P R+ C P G + P PC+RP Q Q +P+P R
Sbjct: 84 RNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRP---QPPQPQPQPYPQR 138
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 27.9 bits (59), Expect = 2.4
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -1
Query: 185 RLQRP*CSAHPKS*RSTCRDPRGFRKMVTSIEVPYARPCRRPSRYQGSQQEPRPCSPR 12
R +RP + P R+ C P G + P PC+RP Q Q +P+P R
Sbjct: 84 RNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRP---QPPQPQPQPYPQR 138
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 27.5 bits (58), Expect = 3.2
Identities = 21/72 (29%), Positives = 29/72 (40%)
Frame = +2
Query: 41 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAG 220
V +D KAFD V H+A+ L G +G + T + + G
Sbjct: 518 VFIDFKKAFDTVEHQAIWKSLDEQG-ADGAYIDLLKECYKNCTTNFTPFHRPVAVPVTKG 576
Query: 221 VPQGSVLSPTLF 256
V QG +SP LF
Sbjct: 577 VRQGDPISPNLF 588
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 27.5 bits (58), Expect = 3.2
Identities = 21/72 (29%), Positives = 29/72 (40%)
Frame = +2
Query: 41 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAG 220
V +D KAFD V H+A+ L G +G + T + + G
Sbjct: 689 VFIDFKKAFDSVEHQAIWKSLDEQG-ADGAYIDLLKECYKNCTTNFTPFHRPVAVPVTKG 747
Query: 221 VPQGSVLSPTLF 256
V QG +SP LF
Sbjct: 748 VRQGDPISPNLF 759
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 27.5 bits (58), Expect = 3.2
Identities = 21/72 (29%), Positives = 29/72 (40%)
Frame = +2
Query: 41 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAG 220
V +D KAFD V H+A+ L G +G + T + + G
Sbjct: 428 VFIDFKKAFDSVEHQAIWKSLDEQG-ADGAYIDLLKECYKNCTTNFTPFHRPVAVPVTKG 486
Query: 221 VPQGSVLSPTLF 256
V QG +SP LF
Sbjct: 487 VRQGDPISPNLF 498
>U80840-2|AAK68305.1| 336|Caenorhabditis elegans Hypothetical
protein F08D12.7 protein.
Length = 336
Score = 27.1 bits (57), Expect = 4.2
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -3
Query: 276 MSLIYRMKSVGE--STEPCGTPALMVMVSEQSP 184
++L+Y + V STEPC + ++MV+E P
Sbjct: 10 LTLLYTLSPVSSQNSTEPCDSDKCLLMVAELGP 42
>Z81077-14|CAN99679.1| 662|Caenorhabditis elegans Hypothetical
protein F36A2.1c protein.
Length = 662
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 68 DRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDG 187
D V+ R K P+ E + WI + D SI ++VDG
Sbjct: 7 DVVYSRLQDVKNPTQEAIETMSMWIMHYKDNASIDLIVDG 46
>Z81077-2|CAD56583.2| 656|Caenorhabditis elegans Hypothetical
protein F36A2.1b protein.
Length = 656
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 68 DRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDG 187
D V+ R K P+ E + WI + D SI ++VDG
Sbjct: 7 DVVYSRLQDVKNPTQEAIETMSMWIMHYKDNASIDLIVDG 46
>Z81077-1|CAB03066.2| 658|Caenorhabditis elegans Hypothetical
protein F36A2.1a protein.
Length = 658
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 68 DRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDG 187
D V+ R K P+ E + WI + D SI ++VDG
Sbjct: 7 DVVYSRLQDVKNPTQEAIETMSMWIMHYKDNASIDLIVDG 46
>Z72504-6|CAA96604.2| 906|Caenorhabditis elegans Hypothetical
protein C29E6.4 protein.
Length = 906
Score = 26.2 bits (55), Expect = 7.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 155 PKS*RSTCRDPRGFRKMVTS 96
P+S +TC P F KM+TS
Sbjct: 258 PRSDENTCNRPYSFEKMITS 277
>Z71266-9|CAD24483.1| 489|Caenorhabditis elegans Hypothetical
protein R06C7.3 protein.
Length = 489
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 278 LSIDGMHCYADDSTGDARYIGHQSLSR 358
L++DG H Y +D ARY+ LSR
Sbjct: 274 LALDGSHYYNEDWLHAARYVMSPPLSR 300
>U28943-1|AAA68356.1| 635|Caenorhabditis elegans Hypothetical
protein E04F6.4 protein.
Length = 635
Score = 26.2 bits (55), Expect = 7.3
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 41 VSLDIAKAFDRVWHRALLSKLPSYGIPEG 127
++ I F+R WH KL YG +G
Sbjct: 556 INRQIKAVFERYWHSTYSQKLQKYGESKG 584
>AY013955-1|AAG59937.1| 27|Caenorhabditis elegans LINE-like
reverse transcriptase protein.
Length = 27
Score = 26.2 bits (55), Expect = 7.3
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 233 SVLSPTLFILYINDML 280
SV P LFIL+IND+L
Sbjct: 1 SVSGPLLFILFINDLL 16
>AB040992-1|BAB21560.1| 489|Caenorhabditis elegans CeCRMP/DHP-1
protein.
Length = 489
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 278 LSIDGMHCYADDSTGDARYIGHQSLSR 358
L++DG H Y +D ARY+ LSR
Sbjct: 274 LALDGSHYYNEDWLHAARYVMSPPLSR 300
>U97196-9|AAB52454.1| 141|Caenorhabditis elegans Hypothetical
protein B0207.9 protein.
Length = 141
Score = 25.8 bits (54), Expect = 9.7
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +3
Query: 210 LTLAFHKVRCSPPRFSSCISMTCCLLMECIAMQMIARGMRDISAIRVSL 356
+T+ F + P S T ++M+CI + I G+RDI + L
Sbjct: 39 ITILFAIISYMKPAISEIRKQTF-IIMDCILLTYIPNGIRDILGCKPEL 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,291,407
Number of Sequences: 27780
Number of extensions: 203914
Number of successful extensions: 629
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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