Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30489
         (368 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   1.1  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   3.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   4.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   4.6  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   6.1  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   6.1  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    20   8.1  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 310 ICIAMHSINRQHVIDIQDEK 251
           IC+A   IN+Q + D+ D K
Sbjct: 32  ICMAKTGINKQIINDVNDGK 51


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 324 SPVLSSA*QCIPSIDSMSLI 265
           +PVL S  Q  PSIDS + I
Sbjct: 531 TPVLPSRFQSHPSIDSANTI 550


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 307 CIAMHSINRQHVIDIQDEKRGGEHR 233
           C  MH + RQ V+      R  +HR
Sbjct: 209 CRTMHRLTRQVVVSSVANVRIADHR 233


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 307 CIAMHSINRQHVIDIQDEKRGGEHR 233
           C  MH + RQ V+      R  +HR
Sbjct: 209 CRTMHRLTRQVVVSSVANVRIADHR 233


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 368 APRSERDSDGRYIAHPPCYHLHSN 297
           A R    ++  Y A+P CY+L  N
Sbjct: 204 AKRMRPAANWGYYAYPYCYNLTPN 227


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 74  PCRRPSRYQGSQQEPRPCSPRL 9
           P +  S  Q SQQ   PC P L
Sbjct: 35  PQQTQSVQQQSQQAGDPCDPSL 56


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +2

Query: 182 DGDCSDTMTINAGVPQGSVLSPTLFILYIN 271
           DG C +  T ++      +   TLF +Y++
Sbjct: 111 DGGCRNFSTCSSHPTAAFISYGTLFFIYVH 140


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,555
Number of Sequences: 438
Number of extensions: 2518
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)