Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30485
         (380 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4X6Z3 Cluster: Putative uncharacterized protein; n=1; ...    31   5.5  
UniRef50_Q236B6 Cluster: Putative uncharacterized protein; n=1; ...    31   5.5  
UniRef50_A4G6F0 Cluster: Putative MSHA biogenesis protein MshN,;...    31   9.6  
UniRef50_A7RM19 Cluster: Predicted protein; n=3; Nematostella ve...    31   9.6  

>UniRef50_Q4X6Z3 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 120

 Score = 31.5 bits (68), Expect = 5.5
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 192 FTGGAFKRKKLIKSLLLQIYLWFFFLCN*LIYSCFEPHQ 76
           F GG FK+KK    L    + +FFF  N + +  F PH+
Sbjct: 53  FFGGVFKKKK--NFLFFFFFFFFFFFHNNIFFYFFPPHK 89


>UniRef50_Q236B6 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 369

 Score = 31.5 bits (68), Expect = 5.5
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +2

Query: 143 NNKDFINFFRLNAPPVNLRIWS*RSAHWRHRFVTHVGEP 259
           NNKDF  F +   PPV  +       HW  RF+    EP
Sbjct: 19  NNKDFQKFLKELQPPVPEQAMEMIKRHWYKRFINQQFEP 57


>UniRef50_A4G6F0 Cluster: Putative MSHA biogenesis protein MshN,;
           n=1; Herminiimonas arsenicoxydans|Rep: Putative MSHA
           biogenesis protein MshN, - Herminiimonas arsenicoxydans
          Length = 397

 Score = 30.7 bits (66), Expect = 9.6
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +3

Query: 204 GVSVVLIGGIDLLHMWVNLSPPTQLIVATI 293
           G+S +L+GG+ LL +W+  +PP Q   A+I
Sbjct: 45  GISTLLLGGV-LLWLWLRPAPPAQTAPASI 73


>UniRef50_A7RM19 Cluster: Predicted protein; n=3; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 908

 Score = 30.7 bits (66), Expect = 9.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 149 YYCRYIYGFFFCVTS*FTLASN 84
           +YC Y+   F+CV S FT+ +N
Sbjct: 569 FYCEYLSAIFYCVLSPFTVGAN 590


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 345,649,264
Number of Sequences: 1657284
Number of extensions: 5988399
Number of successful extensions: 10224
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10222
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14868845845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)