Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30480
         (737 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6BXT4 Cluster: Similar to tr|Q9P871 Candida albicans C...    36   1.4  
UniRef50_Q8IK00 Cluster: Putative uncharacterized protein; n=1; ...    35   1.8  
UniRef50_Q28JM9 Cluster: Putative HTH-type transcriptional regul...    34   4.2  
UniRef50_Q7M449 Cluster: Cryptogene protein G4; n=1; Leishmania ...    33   7.3  

>UniRef50_Q6BXT4 Cluster: Similar to tr|Q9P871 Candida albicans
           Copper transport protein 1; n=1; Debaryomyces
           hansenii|Rep: Similar to tr|Q9P871 Candida albicans
           Copper transport protein 1 - Debaryomyces hansenii
           (Yeast) (Torulaspora hansenii)
          Length = 222

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
 Frame = +3

Query: 471 SNNLIQNTCH*NSRWLFFNTS---SYLILIIYCNRKCELR*KCALVFRDISSMLCYSIFI 641
           SN +  N+   NS  LF +     S L+ ++Y N K   +    L+   I ++L Y++ +
Sbjct: 104 SNTMTTNSRELNSTSLFLSPKRKRSILLQMLYTNWKDFEKDIVRLILSFIIAILSYTLML 163

Query: 642 YVVLFITAYFSAI*SGILI 698
            ++ ++T YF A+  GI +
Sbjct: 164 VIMTYVTCYFFAVVLGIAV 182


>UniRef50_Q8IK00 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1308

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = -2

Query: 367 HFTKSDTYRRYKEPQRKILRGTNHQTYFKFICIHRFFIMEHLHIFS 230
           H+ K   Y+ Y    + ILR TN+Q +  F+C+  F  +E+L IF+
Sbjct: 816 HYNKHMIYK-YNSYYKNILR-TNNQNFHSFLCLVYFMFLENLDIFT 859


>UniRef50_Q28JM9 Cluster: Putative HTH-type transcriptional
           regulator in lacX 3'region; n=1; Jannaschia sp.
           CCS1|Rep: Putative HTH-type transcriptional regulator in
           lacX 3'region - Jannaschia sp. (strain CCS1)
          Length = 191

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = -3

Query: 156 MCAWGPSRSKP--FNVRTSTQVSEVSARRCVRATTERANKQLFGPHTNKPTTN 4
           +C+W  +R  P    + TS+  S  +A R   A TE    +LF PHT+  T N
Sbjct: 95  LCSWDAARQTPDAAELETSSLTSIKTAMREADAATEEMLTELFMPHTDALTQN 147


>UniRef50_Q7M449 Cluster: Cryptogene protein G4; n=1; Leishmania
           tarentolae|Rep: Cryptogene protein G4 - Leishmania
           tarentolae (Sauroleishmania tarentolae)
          Length = 169

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 611 LIYVMLFYIHLCCIIYYCLFFC 676
           +++    Y  +CCI Y+C FFC
Sbjct: 8   VVFGFFMYYFVCCIFYFCFFFC 29


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,678,469
Number of Sequences: 1657284
Number of extensions: 13949762
Number of successful extensions: 32828
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32797
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)