Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30480
         (737 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031861-1|AAH31861.2|  328|Homo sapiens spermatogenesis and oog...    30   10.0 
AY902244-1|AAW82617.1|  328|Homo sapiens newborn ovary helix loo...    30   10.0 
AY884306-1|AAW78548.1|  217|Homo sapiens TEB2 protein.                 30   10.0 
AL158822-5|CAI39241.2|  328|Homo sapiens spermatogenesis and oog...    30   10.0 

>BC031861-1|AAH31861.2|  328|Homo sapiens spermatogenesis and
           oogenesis specific basic helix-loop-helix 1 protein.
          Length = 328

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +2

Query: 29  GPNSCLLARSVVARTQRRADTSLTCVLVRTL 121
           GP+SCL  R+V++  +RR   SL+C  +R L
Sbjct: 50  GPSSCL-RRNVISERERRKRMSLSCERLRAL 79


>AY902244-1|AAW82617.1|  328|Homo sapiens newborn ovary helix loop
           helix protein.
          Length = 328

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +2

Query: 29  GPNSCLLARSVVARTQRRADTSLTCVLVRTL 121
           GP+SCL  R+V++  +RR   SL+C  +R L
Sbjct: 50  GPSSCL-RRNVISERERRKRMSLSCERLRAL 79


>AY884306-1|AAW78548.1|  217|Homo sapiens TEB2 protein.
          Length = 217

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +2

Query: 29  GPNSCLLARSVVARTQRRADTSLTCVLVRTL 121
           GP+SCL  R+V++  +RR   SL+C  +R L
Sbjct: 52  GPSSCL-RRNVISERERRKRMSLSCERLRAL 81


>AL158822-5|CAI39241.2|  328|Homo sapiens spermatogenesis and
           oogenesis specific basic helix-loop-helix 1 protein.
          Length = 328

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +2

Query: 29  GPNSCLLARSVVARTQRRADTSLTCVLVRTL 121
           GP+SCL  R+V++  +RR   SL+C  +R L
Sbjct: 50  GPSSCL-RRNVISERERRKRMSLSCERLRAL 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,394,927
Number of Sequences: 237096
Number of extensions: 2118232
Number of successful extensions: 4244
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4241
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)