Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30480
         (737 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095060-1|AAM11388.1|  587|Drosophila melanogaster LD47995p pro...    30   2.9  
AE013599-2988|AAF57489.2|  587|Drosophila melanogaster CG10444-P...    30   2.9  

>AY095060-1|AAM11388.1|  587|Drosophila melanogaster LD47995p
           protein.
          Length = 587

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -2

Query: 478 LLLYTIVFHETIVLFKCSKAINFKVFMQN*RKIL*INHFTK--SDTYRRYKEPQ 323
           L+   + +  +IVL  C KA N ++++   RK L  + F    S  +RR+KE Q
Sbjct: 519 LIAVVVGYFSSIVLAHCGKAENAEIYLDKSRKQLDYDLFAPMLSRRWRRHKEEQ 572


>AE013599-2988|AAF57489.2|  587|Drosophila melanogaster CG10444-PA
           protein.
          Length = 587

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -2

Query: 478 LLLYTIVFHETIVLFKCSKAINFKVFMQN*RKIL*INHFTK--SDTYRRYKEPQ 323
           L+   + +  +IVL  C KA N ++++   RK L  + F    S  +RR+KE Q
Sbjct: 519 LIAVVVGYFSSIVLAHCGKAENAEIYLDKSRKQLDYDLFAPMLSRRWRRHKEEQ 572


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,265,683
Number of Sequences: 53049
Number of extensions: 650777
Number of successful extensions: 1445
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1445
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)