Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30480
         (737 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p...    32   0.49 
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr...    32   0.49 
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.      32   0.49 
AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.      29   3.4  
AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.      29   3.4  
AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1 suppres...    29   3.4  
Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z81562-1|CAB04560.2|  367|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical ...    28   7.9  

>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
           protein C02F4.1 protein.
          Length = 1781

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +2

Query: 233 KNV*MFHNEKPMYANELKISLVICSPQNFALRFL 334
           K++ ++H +KPM+   +KI+L  C+  +  LR L
Sbjct: 469 KSIVVYHTDKPMWTEPIKIALPSCASHDVYLRIL 502


>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
           protein C02F4.1 protein.
          Length = 1781

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +2

Query: 233 KNV*MFHNEKPMYANELKISLVICSPQNFALRFL 334
           K++ ++H +KPM+   +KI+L  C+  +  LR L
Sbjct: 469 KSIVVYHTDKPMWTEPIKIALPSCASHDVYLRIL 502


>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
          Length = 1781

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +2

Query: 233 KNV*MFHNEKPMYANELKISLVICSPQNFALRFL 334
           K++ ++H +KPM+   +KI+L  C+  +  LR L
Sbjct: 469 KSIVVYHTDKPMWTEPIKIALPSCASHDVYLRIL 502


>AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 64  RTHTAARGHFTHLCTRSYIKRLTSRRSPRAH 156
           RTH A R H   +C R +I++    R  R H
Sbjct: 616 RTHMAVRAHLCKICGRGFIEKSHLVRHERIH 646


>AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 64  RTHTAARGHFTHLCTRSYIKRLTSRRSPRAH 156
           RTH A R H   +C R +I++    R  R H
Sbjct: 616 RTHMAVRAHLCKICGRGFIEKSHLVRHERIH 646


>AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1
           suppressor/dio uptake defective/raf enhancer protein 1
           protein.
          Length = 909

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 64  RTHTAARGHFTHLCTRSYIKRLTSRRSPRAH 156
           RTH A R H   +C R +I++    R  R H
Sbjct: 616 RTHMAVRAHLCKICGRGFIEKSHLVRHERIH 646


>Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical
           protein Y48E1A.1a protein.
          Length = 1737

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +2

Query: 110 VRTLKGLLREGPHAH 154
           V  +KGLLR+GPH H
Sbjct: 516 VNEMKGLLRQGPHQH 530


>Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical
           protein Y48E1A.1a protein.
          Length = 1737

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +2

Query: 110 VRTLKGLLREGPHAH 154
           V  +KGLLR+GPH H
Sbjct: 516 VNEMKGLLRQGPHQH 530


>Z81562-1|CAB04560.2|  367|Caenorhabditis elegans Hypothetical
           protein K03D7.2 protein.
          Length = 367

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = -2

Query: 496 HVFCIRLLLYTI--VFHETIVLFKCSKAINFKVFM 398
           HV  + L++ T+  V H TI+  KC +A++  VF+
Sbjct: 36  HVHFVALIVGTVLGVIHLTILTRKCMRALSINVFL 70


>AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical
           protein Y48E1A.1a protein.
          Length = 1737

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +2

Query: 110 VRTLKGLLREGPHAH 154
           V  +KGLLR+GPH H
Sbjct: 516 VNEMKGLLRQGPHQH 530


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,663,510
Number of Sequences: 27780
Number of extensions: 363461
Number of successful extensions: 836
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)