Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30477
(778 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy c... 131 5e-31
L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated p... 131 5e-31
AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy... 131 5e-31
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 33 0.17
Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 33 0.23
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 33 0.23
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 33 0.30
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 33 0.30
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 33 0.30
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 32 0.53
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 32 0.53
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 32 0.53
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 32 0.53
Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical pr... 31 0.70
AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical ... 31 0.70
Z80216-6|CAB02285.2| 313|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical pr... 30 1.6
X78553-1|CAA55296.1| 543|Caenorhabditis elegans cytoplasmic int... 30 1.6
U49831-2|AAK68314.1| 526|Caenorhabditis elegans Intermediate fi... 30 1.6
U49831-1|AAA93405.1| 543|Caenorhabditis elegans Intermediate fi... 30 1.6
AL132904-19|CAD91707.1| 371|Caenorhabditis elegans Hypothetical... 30 2.1
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 30 2.1
Z83104-7|CAH60780.1| 762|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z70685-2|CAA94606.2| 762|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF068716-7|AAC17746.1| 384|Caenorhabditis elegans Hypothetical ... 29 2.8
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF099003-3|ABA00149.1| 759|Caenorhabditis elegans Hypothetical ... 29 3.7
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical pr... 29 4.9
U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical pr... 29 4.9
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 29 4.9
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 29 4.9
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 29 4.9
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 28 6.5
U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z49910-7|CAA90124.4| 384|Caenorhabditis elegans Hypothetical pr... 28 8.6
AL031630-3|CAA20983.1| 140|Caenorhabditis elegans Hypothetical ... 28 8.6
AF039047-10|AAB94229.2| 400|Caenorhabditis elegans Hypothetical... 28 8.6
>L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy chain
protein.
Length = 815
Score = 131 bits (317), Expect = 5e-31
Identities = 71/130 (54%), Positives = 91/130 (70%)
Frame = +2
Query: 5 NLRKLFVQDLQARIKKXXXXXXXXXXXXXXLAQKQKISFLENNLEQLTKVHKQLVRDNAD 184
NL+K F++ L AR + AQKQ+I FLENNL++LTKVHKQLVRDNAD
Sbjct: 667 NLKKEFMRVLVARCQANQDTEGEDSLSGP--AQKQRIQFLENNLDKLTKVHKQLVRDNAD 724
Query: 185 LRCEVPKLEKRLRATMERVKALETALKEAKDGAMRDRKRYQFEVDRIKEAVRAKNLARRG 364
LR E+PK+E RLR +R+K LETAL+++K + +RK+YQ EV+RIKEAVR +N+ RR
Sbjct: 725 LRVELPKMEARLRGREDRIKILETALRDSKQRSQAERKKYQQEVERIKEAVRQRNM-RRM 783
Query: 365 PQAQIAKPIR 394
QI KPIR
Sbjct: 784 NAPQIVKPIR 793
>L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated
protein 116 protein.
Length = 815
Score = 131 bits (317), Expect = 5e-31
Identities = 71/130 (54%), Positives = 91/130 (70%)
Frame = +2
Query: 5 NLRKLFVQDLQARIKKXXXXXXXXXXXXXXLAQKQKISFLENNLEQLTKVHKQLVRDNAD 184
NL+K F++ L AR + AQKQ+I FLENNL++LTKVHKQLVRDNAD
Sbjct: 667 NLKKEFMRVLVARCQANQDTEGEDSLSGP--AQKQRIQFLENNLDKLTKVHKQLVRDNAD 724
Query: 185 LRCEVPKLEKRLRATMERVKALETALKEAKDGAMRDRKRYQFEVDRIKEAVRAKNLARRG 364
LR E+PK+E RLR +R+K LETAL+++K + +RK+YQ EV+RIKEAVR +N+ RR
Sbjct: 725 LRVELPKMEARLRGREDRIKILETALRDSKQRSQAERKKYQQEVERIKEAVRQRNM-RRM 783
Query: 365 PQAQIAKPIR 394
QI KPIR
Sbjct: 784 NAPQIVKPIR 793
>AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy
chain protein.
Length = 815
Score = 131 bits (317), Expect = 5e-31
Identities = 71/130 (54%), Positives = 91/130 (70%)
Frame = +2
Query: 5 NLRKLFVQDLQARIKKXXXXXXXXXXXXXXLAQKQKISFLENNLEQLTKVHKQLVRDNAD 184
NL+K F++ L AR + AQKQ+I FLENNL++LTKVHKQLVRDNAD
Sbjct: 667 NLKKEFMRVLVARCQANQDTEGEDSLSGP--AQKQRIQFLENNLDKLTKVHKQLVRDNAD 724
Query: 185 LRCEVPKLEKRLRATMERVKALETALKEAKDGAMRDRKRYQFEVDRIKEAVRAKNLARRG 364
LR E+PK+E RLR +R+K LETAL+++K + +RK+YQ EV+RIKEAVR +N+ RR
Sbjct: 725 LRVELPKMEARLRGREDRIKILETALRDSKQRSQAERKKYQQEVERIKEAVRQRNM-RRM 783
Query: 365 PQAQIAKPIR 394
QI KPIR
Sbjct: 784 NAPQIVKPIR 793
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily assigned
gene nameprotein 278 protein.
Length = 1130
Score = 33.5 bits (73), Expect = 0.17
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +2
Query: 104 KQKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERV-KALETALKEAKDG 280
K++I LEN L++ ++ +QL D P +KR+ T V + + +K+ ++
Sbjct: 960 KEQIEDLENALQRKNELIQQLQDRQTDESTSEPHTKKRMSITSHGVFQNFVSQMKDKREE 1019
Query: 281 AMRDRKRYQFEVDRIKEAVRAKNLAR 358
A R R + E KE +A+ A+
Sbjct: 1020 ASEKRTRKEAEKKAEKEKEKAEKAAK 1045
>Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical
protein M01E5.5b protein.
Length = 734
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/52 (34%), Positives = 34/52 (65%)
Frame = +2
Query: 203 KLEKRLRATMERVKALETALKEAKDGAMRDRKRYQFEVDRIKEAVRAKNLAR 358
KLE++++ + VK E ALK A+ GA ++++ Q + DR+KE ++ ++R
Sbjct: 623 KLEQKIKDKKKEVKEAEAALKSAR-GA--EKEKAQKKYDRLKEQLKKLKISR 671
>Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/52 (34%), Positives = 34/52 (65%)
Frame = +2
Query: 203 KLEKRLRATMERVKALETALKEAKDGAMRDRKRYQFEVDRIKEAVRAKNLAR 358
KLE++++ + VK E ALK A+ GA ++++ Q + DR+KE ++ ++R
Sbjct: 695 KLEQKIKDKKKEVKEAEAALKSAR-GA--EKEKAQKKYDRLKEQLKKLKISR 743
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/52 (34%), Positives = 34/52 (65%)
Frame = +2
Query: 203 KLEKRLRATMERVKALETALKEAKDGAMRDRKRYQFEVDRIKEAVRAKNLAR 358
KLE++++ + VK E ALK A+ GA ++++ Q + DR+KE ++ ++R
Sbjct: 695 KLEQKIKDKKKEVKEAEAALKSAR-GA--EKEKAQKKYDRLKEQLKKLKISR 743
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 32.7 bits (71), Expect = 0.30
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 104 KQKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVK-ALETALKEAKDG 280
+QK+ + + T +L DN+DL +V +LE L AT+ R K A + L EAK
Sbjct: 1267 QQKVDEQSRQIGEYTSTKGRLSNDNSDLARQVEELEIHL-ATINRAKTAFSSQLVEAKKA 1325
Query: 281 A 283
A
Sbjct: 1326 A 1326
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 32.7 bits (71), Expect = 0.30
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 104 KQKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVK-ALETALKEAKDG 280
+QK+ + + T +L DN+DL +V +LE L AT+ R K A + L EAK
Sbjct: 1267 QQKVDEQSRQIGEYTSTKGRLSNDNSDLARQVEELEIHL-ATINRAKTAFSSQLVEAKKA 1325
Query: 281 A 283
A
Sbjct: 1326 A 1326
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 32.7 bits (71), Expect = 0.30
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 104 KQKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVK-ALETALKEAKDG 280
+QK+ + + T +L DN+DL +V +LE L AT+ R K A + L EAK
Sbjct: 1267 QQKVDEQSRQIGEYTSTKGRLSNDNSDLARQVEELEIHL-ATINRAKTAFSSQLVEAKKA 1325
Query: 281 A 283
A
Sbjct: 1326 A 1326
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/70 (24%), Positives = 36/70 (51%)
Frame = +2
Query: 125 ENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDGAMRDRKRY 304
E + +LTK+H+ L+ ++ L+ + E+ + E+++ L E DG DR +
Sbjct: 820 EARMNELTKIHEMLMEEHDQLKVDHLHTEEEVERLKEKMRKELEKLNEQNDG---DRAEW 876
Query: 305 QFEVDRIKEA 334
E +R++ +
Sbjct: 877 SNERNRLESS 886
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/70 (24%), Positives = 36/70 (51%)
Frame = +2
Query: 125 ENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDGAMRDRKRY 304
E + +LTK+H+ L+ ++ L+ + E+ + E+++ L E DG DR +
Sbjct: 820 EARMNELTKIHEMLMEEHDQLKVDHLHTEEEVERLKEKMRKELEKLNEQNDG---DRAEW 876
Query: 305 QFEVDRIKEA 334
E +R++ +
Sbjct: 877 SNERNRLESS 886
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/70 (24%), Positives = 36/70 (51%)
Frame = +2
Query: 125 ENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDGAMRDRKRY 304
E + +LTK+H+ L+ ++ L+ + E+ + E+++ L E DG DR +
Sbjct: 580 EARMNELTKIHEMLMEEHDQLKVDHLHTEEEVERLKEKMRKELEKLNEQNDG---DRAEW 636
Query: 305 QFEVDRIKEA 334
E +R++ +
Sbjct: 637 SNERNRLESS 646
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/70 (24%), Positives = 36/70 (51%)
Frame = +2
Query: 125 ENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDGAMRDRKRY 304
E + +LTK+H+ L+ ++ L+ + E+ + E+++ L E DG DR +
Sbjct: 820 EARMNELTKIHEMLMEEHDQLKVDHLHTEEEVERLKEKMRKELEKLNEQNDG---DRAEW 876
Query: 305 QFEVDRIKEA 334
E +R++ +
Sbjct: 877 SNERNRLESS 886
>Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical
protein Y48E1A.1a protein.
Length = 1737
Score = 31.5 bits (68), Expect = 0.70
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 334 GFLDSVHFELVSFAIAHCTVFCFLERC-LECLDTFHGGSESFLQLGHF 194
G LD HF F +AHC + RC ++ L F ++LQ F
Sbjct: 782 GVLDKAHFGATQFGLAHCAFELYGHRCGVQLLSCFSRLFTTYLQFHGF 829
>Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical
protein Y48E1A.1a protein.
Length = 1737
Score = 31.5 bits (68), Expect = 0.70
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 334 GFLDSVHFELVSFAIAHCTVFCFLERC-LECLDTFHGGSESFLQLGHF 194
G LD HF F +AHC + RC ++ L F ++LQ F
Sbjct: 782 GVLDKAHFGATQFGLAHCAFELYGHRCGVQLLSCFSRLFTTYLQFHGF 829
>AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical
protein Y48E1A.1a protein.
Length = 1737
Score = 31.5 bits (68), Expect = 0.70
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 334 GFLDSVHFELVSFAIAHCTVFCFLERC-LECLDTFHGGSESFLQLGHF 194
G LD HF F +AHC + RC ++ L F ++LQ F
Sbjct: 782 GVLDKAHFGATQFGLAHCAFELYGHRCGVQLLSCFSRLFTTYLQFHGF 829
>Z80216-6|CAB02285.2| 313|Caenorhabditis elegans Hypothetical
protein F10G8.6 protein.
Length = 313
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = -1
Query: 244 LDTFHGGSESFLQLGHFASQVGIVTHELLVDFRQLLQVILQERDLLFLCKGTAFLLGALF 65
+DT G S+ + L F Q G + L+V Q + ++ +++ F K +LG +
Sbjct: 174 IDTPPGTSDEHISLVQFLLQAGPLDGALIVSTPQEVSLLDVRKEVSFCVKTKVPILGVVE 233
Query: 64 RIVRFLYP 41
+ RF+ P
Sbjct: 234 NMARFVCP 241
>Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 104 KQKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALE--TALKEAKD 277
+Q+ S ++ L +H++L+++NA L+ + EK + R K LE + +
Sbjct: 154 EQRFSHSRDDFLTLKDIHERLLKENACLKEKRVSPEKLEELSRYRNKVLEYSKCITALRS 213
Query: 278 GAMRDRKRYQFEVDRIK 328
A KRY+ V + K
Sbjct: 214 SAYEKDKRYEMLVQKFK 230
>Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 104 KQKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALE--TALKEAKD 277
+Q+ S ++ L +H++L+++NA L+ + EK + R K LE + +
Sbjct: 154 EQRFSHSRDDFLTLKDIHERLLKENACLKEKRVSPEKLEELSRYRNKVLEYSKCITALRS 213
Query: 278 GAMRDRKRYQFEVDRIK 328
A KRY+ V + K
Sbjct: 214 SAYEKDKRYEMLVQKFK 230
>X78553-1|CAA55296.1| 543|Caenorhabditis elegans cytoplasmic
intermediate filamentprotein protein.
Length = 543
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 209 EKRLRATMERVKALETALKEAKDGAMRDRKRYQFEVDRIK 328
EKRL A +++ A K+ D A+ DR+R Q E D +K
Sbjct: 167 EKRLYAEQDQLYLQLAAAKDELDAAIVDRRRLQAEEDDLK 206
>U49831-2|AAK68314.1| 526|Caenorhabditis elegans Intermediate
filament, b protein2, isoform c protein.
Length = 526
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 209 EKRLRATMERVKALETALKEAKDGAMRDRKRYQFEVDRIK 328
EKRL A +++ A K+ D A+ DR+R Q E D +K
Sbjct: 167 EKRLYAEQDQLYLQLAAAKDELDAAIVDRRRLQAEEDDLK 206
>U49831-1|AAA93405.1| 543|Caenorhabditis elegans Intermediate
filament, b protein2, isoform a protein.
Length = 543
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 209 EKRLRATMERVKALETALKEAKDGAMRDRKRYQFEVDRIK 328
EKRL A +++ A K+ D A+ DR+R Q E D +K
Sbjct: 167 EKRLYAEQDQLYLQLAAAKDELDAAIVDRRRLQAEEDDLK 206
>AL132904-19|CAD91707.1| 371|Caenorhabditis elegans Hypothetical
protein Y111B2A.26 protein.
Length = 371
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/73 (21%), Positives = 35/73 (47%)
Frame = +2
Query: 125 ENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDGAMRDRKRY 304
E +++L ++ + L+ E + E+R RV+ LET + ++GA ++Y
Sbjct: 34 EKKVKELQRLREHLMIVEETSTREAVEAEQRETELRARVRELETKGHQVEEGASESTQQY 93
Query: 305 QFEVDRIKEAVRA 343
Q ++ + V +
Sbjct: 94 QVQIASLTSQVES 106
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +2
Query: 107 QKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDGAM 286
QKI LEN +L K+ N DL+ K+EK ++ + +E +EA+DG
Sbjct: 261 QKIKILENERLKLVDFKKKWKSVNDDLQEANCKIEK-----LQNLVGIEKKYREARDGKE 315
Query: 287 RDRKRYQFEVDR 322
+ +Y V +
Sbjct: 316 LYKSKYDIVVKK 327
>Z83104-7|CAH60780.1| 762|Caenorhabditis elegans Hypothetical
protein R07D5.2 protein.
Length = 762
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 116 SFLENNLEQLTKVHKQLVRDN-----ADL--RCEVPKLEKRLRATMERVKALETALKEAK 274
S L N L Q+ +QL+ D ADL RC VP +EKR ER + L + +
Sbjct: 141 SGLFNTLYQVDNPDRQLICDRISDVYADLYGRCYVPHVEKRQAKIKERCNGISAPLLKFQ 200
Query: 275 DGAMR 289
D +R
Sbjct: 201 DFFLR 205
>Z70685-2|CAA94606.2| 762|Caenorhabditis elegans Hypothetical
protein R07D5.2 protein.
Length = 762
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 116 SFLENNLEQLTKVHKQLVRDN-----ADL--RCEVPKLEKRLRATMERVKALETALKEAK 274
S L N L Q+ +QL+ D ADL RC VP +EKR ER + L + +
Sbjct: 141 SGLFNTLYQVDNPDRQLICDRISDVYADLYGRCYVPHVEKRQAKIKERCNGISAPLLKFQ 200
Query: 275 DGAMR 289
D +R
Sbjct: 201 DFFLR 205
>AF068716-7|AAC17746.1| 384|Caenorhabditis elegans Hypothetical
protein F26D11.2 protein.
Length = 384
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/80 (21%), Positives = 39/80 (48%)
Frame = +2
Query: 140 QLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDGAMRDRKRYQFEVD 319
+LTK + NA+ + ++EK L+ ++K +A K+ + + R+ + +
Sbjct: 236 RLTKAQLETAIKNAEKEARIAEMEKILKRRKAQLKERRSARKQRELAMKKRRESRKLRIT 295
Query: 320 RIKEAVRAKNLARRGPQAQI 379
+I++ R+ RR P ++
Sbjct: 296 KIQDDSRS---VRRSPVGRV 312
>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
protein F59A6.5 protein.
Length = 1286
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Frame = +2
Query: 137 EQLTK-VHKQ---LVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDGAMRDRKRY 304
EQ TK +H++ L R AD+RCE+ LE R + +E L+ L++ +D A+ D ++
Sbjct: 323 EQATKYLHEENMKLTRQKADIRCEL--LEARRK--VEGFDKLKQELEKERDDALADVQKI 378
Query: 305 QFEVDR 322
+ EV R
Sbjct: 379 R-EVKR 383
>AF099003-3|ABA00149.1| 759|Caenorhabditis elegans Hypothetical
protein Y59C2A.3 protein.
Length = 759
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2
Query: 212 KRLRATMERVKALETALKEAKDGAMRDRKRYQFEVDRIKEAVRAKNLARRGPQAQI 379
K RA +R + L + E A+ R+R + VD EAVR KN A++ A+I
Sbjct: 195 KEKRAAADRARYLR--MSEEDRSALNQRRREKHSVDVNLEAVREKN-AKKAEAARI 247
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 137 EQLTK-VHKQ---LVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDGAMR 289
EQ TK +H + L R AD+RC++ + + L+ E+ + LE EA + R
Sbjct: 315 EQATKYLHAENMKLTRQKADIRCDLLEARRNLKGFDEKREELEKQRDEALEDVRR 369
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 122 LENNLEQLTKVHKQLVRDNADLRCEVPKLEKR-LRATMERVKALETALKEAKDGAMRDRK 298
L+ LEQLT++ ++L + ++ +PK K L + E+V+ +E E R
Sbjct: 2549 LKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANIEETRA 2608
Query: 299 RYQFEVDRIKEAVRAKNLARRG 364
+ + +E N A G
Sbjct: 2609 KISEIAGKAEEITEKANSAMEG 2630
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 122 LENNLEQLTKVHKQLVRDNADLRCEVPKLEKR-LRATMERVKALETALKEAKDGAMRDRK 298
L+ LEQLT++ ++L + ++ +PK K L + E+V+ +E E R
Sbjct: 2549 LKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANIEETRA 2608
Query: 299 RYQFEVDRIKEAVRAKNLARRG 364
+ + +E N A G
Sbjct: 2609 KISEIAGKAEEITEKANSAMEG 2630
>Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical
protein T28C6.7 protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Frame = +2
Query: 137 EQLTKVHKQLVRDNADLRCEVPKLEKRLR--------ATMERVKALETALKEAKDGAMRD 292
+Q+ +++ + + AD E+ K K + A R+K LET L++ +
Sbjct: 221 QQVIELNSSVEKMKADYESEILKYTKEAKTAGLKAKVAATARIKELETTLEDINGKYEDE 280
Query: 293 RKRYQFEVDRIKEA 334
R R Q EVD ++ +
Sbjct: 281 RDRLQEEVDTLRSS 294
>U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical
protein R02F2.2 protein.
Length = 1182
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +3
Query: 15 NSLFKTCRRG*RNRTIL----KRAPRRKAVPLHKNKRSRSWRITWSN*RKSTSSSCVTMP 182
NS + + RR N ++ RR+++ +RS S R + N RK+ S V MP
Sbjct: 37 NSFYNSRRRSDANLNFFNERERQRERRRSMVRASRERSESRRASQQNLRKTNSEPNVDMP 96
Query: 183 TCDAK 197
+ D +
Sbjct: 97 SIDVE 101
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 122 LENNLEQLTKVHKQLVRDNADLRCEVPKLEKR-LRATMERVKALETALKEAKDGAMRDRK 298
L+ LEQLT++ ++L + ++ +PK K L + E+V+ +E E R
Sbjct: 363 LKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANIEETRA 422
Query: 299 RYQFEVDRIKEAVRAKNLARRG 364
+ + +E N A G
Sbjct: 423 KISEIAGKAEEITEKANSAMEG 444
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 122 LENNLEQLTKVHKQLVRDNADLRCEVPKLEKR-LRATMERVKALETALKEAKDGAMRDRK 298
L+ LEQLT++ ++L + ++ +PK K L + E+V+ +E E R
Sbjct: 2549 LKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANIEETRA 2608
Query: 299 RYQFEVDRIKEAVRAKNLARRG 364
+ + +E N A G
Sbjct: 2609 KISEIAGKAEEITEKANSAMEG 2630
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 122 LENNLEQLTKVHKQLVRDNADLRCEVPKLEKR-LRATMERVKALETALKEAKDGAMRDRK 298
L+ LEQLT++ ++L + ++ +PK K L + E+V+ +E E R
Sbjct: 2549 LKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANIEETRA 2608
Query: 299 RYQFEVDRIKEAVRAKNLARRG 364
+ + +E N A G
Sbjct: 2609 KISEIAGKAEEITEKANSAMEG 2630
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 110 KISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKE 268
++S + NN+E+L K+ K L R+N L + +L +L+ E L L E
Sbjct: 234 EMSEMRNNIERLQKMEKALERENERLNHQ-KELSDKLKVVNEENNDLRQNLAE 285
>U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical
protein R09H3.1 protein.
Length = 1073
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2
Query: 194 EVPKLEKRLRATMERVKALETALKE 268
E+P LE LRA +E++KA E ALK+
Sbjct: 158 EIPNLENDLRAEVEKLKA-ELALKD 181
>Z49910-7|CAA90124.4| 384|Caenorhabditis elegans Hypothetical
protein F44G4.1 protein.
Length = 384
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/86 (22%), Positives = 47/86 (54%)
Frame = +2
Query: 122 LENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDGAMRDRKR 301
++++ ++ K K++V+ +++ E+ +++L+ +E+ +A + + KD K
Sbjct: 42 VDSDEDEPPKKKKKVVKK--EIKQELELTDEKLQELLEKYEASKATATKTKDDFKHLPKS 99
Query: 302 YQFEVDRIKEAVRAKNLARRGPQAQI 379
+ + +K A+R AR+G +AQI
Sbjct: 100 QRGKA--LKRALRKDKRARQGERAQI 123
>AL031630-3|CAA20983.1| 140|Caenorhabditis elegans Hypothetical
protein Y38H6C.3 protein.
Length = 140
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 203 KLEKRLRATMERVKALETA 259
++EKR MERVKA+ETA
Sbjct: 45 EIEKRRNENMERVKAIETA 63
>AF039047-10|AAB94229.2| 400|Caenorhabditis elegans Hypothetical
protein K11D12.9 protein.
Length = 400
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +2
Query: 134 LEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDGAMRDRKRYQFE 313
L++LTK H QLV + + + ++ + E LET + E+K R
Sbjct: 274 LDELTKKHSQLVDLSTEFLPNINAVKMLYKELFESFPQLETNVHESKLSMER-------R 326
Query: 314 VDRIKEAVRAKN 349
V+ ++E +R++N
Sbjct: 327 VEEVEEQLRSRN 338
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,807,634
Number of Sequences: 27780
Number of extensions: 232850
Number of successful extensions: 929
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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