Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30476
(826 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g18640.2 68414.m02324 3-phosphoserine phosphatase (PSP) nearl... 32 0.53
At1g18640.1 68414.m02323 3-phosphoserine phosphatase (PSP) nearl... 32 0.53
At1g30450.3 68414.m03722 cation-chloride cotransporter, putative... 30 1.6
At1g30450.2 68414.m03721 cation-chloride cotransporter, putative... 30 1.6
At1g30450.1 68414.m03720 cation-chloride cotransporter, putative... 30 1.6
At4g16080.1 68417.m02438 hypothetical protein contains Pfam prof... 29 5.0
At2g01050.1 68415.m00010 hypothetical protein 28 6.5
At1g62260.1 68414.m07024 pentatricopeptide (PPR) repeat-containi... 28 6.5
At4g11530.1 68417.m01850 protein kinase family protein contains ... 28 8.7
At3g29185.1 68416.m03658 expressed protein 28 8.7
At1g49740.1 68414.m05578 expressed protein similar to MAP3K-like... 28 8.7
>At1g18640.2 68414.m02324 3-phosphoserine phosphatase (PSP) nearly
identical to 3-phosphoserine phosphatase GI:3759177 from
[Arabidopsis thaliana]
Length = 295
Score = 31.9 bits (69), Expect = 0.53
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = -3
Query: 446 NTLGYYDTLLDNSTLLDVWAEVDGMCYSYDAHILV 342
+TLG+ ++ + +LD+W V+ +C+ D+ + V
Sbjct: 62 STLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCV 96
>At1g18640.1 68414.m02323 3-phosphoserine phosphatase (PSP) nearly
identical to 3-phosphoserine phosphatase GI:3759177 from
[Arabidopsis thaliana]
Length = 295
Score = 31.9 bits (69), Expect = 0.53
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = -3
Query: 446 NTLGYYDTLLDNSTLLDVWAEVDGMCYSYDAHILV 342
+TLG+ ++ + +LD+W V+ +C+ D+ + V
Sbjct: 62 STLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCV 96
>At1g30450.3 68414.m03722 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 201 LKGSGSW*EQYQRTVGTIDSRWV 133
+KG W +YQR GTID W+
Sbjct: 767 IKGLDEWPNEYQRQYGTIDLYWI 789
>At1g30450.2 68414.m03721 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 201 LKGSGSW*EQYQRTVGTIDSRWV 133
+KG W +YQR GTID W+
Sbjct: 767 IKGLDEWPNEYQRQYGTIDLYWI 789
>At1g30450.1 68414.m03720 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 201 LKGSGSW*EQYQRTVGTIDSRWV 133
+KG W +YQR GTID W+
Sbjct: 767 IKGLDEWPNEYQRQYGTIDLYWI 789
>At4g16080.1 68417.m02438 hypothetical protein contains Pfam profile
PF03478: Protein of unknown function (DUF295)
Length = 379
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 565 PLYCSLQFSLLVTMSSSLWRLPSDTL 488
P Y L FS+LVT +SLW L D +
Sbjct: 212 PQYHELNFSILVTGHTSLWSLLQDNV 237
>At2g01050.1 68415.m00010 hypothetical protein
Length = 515
Score = 28.3 bits (60), Expect = 6.5
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Frame = -3
Query: 572 IMTLVLFPAVFFVGHNEFELVEVAVRYTAALNGSSPSEQINKNTL-----GYYDTLLDNS 408
+MT++ P FF+ FEL E Y AAL G P + L +D L D+
Sbjct: 108 VMTVMDLPRQFFM--IRFELEE---EYMAALTGG-PWRVLGNYLLVQDWSSRFDPLRDDI 161
Query: 407 TLLDVWAEVDGMCYSYDAHILVVILLREFG 318
VW + + Y+Y L++ + R G
Sbjct: 162 VTTPVWVRLSNIPYNYYHRCLLMEIARGLG 191
>At1g62260.1 68414.m07024 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 656
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 636 NTDLGAPAFFQNALVGIVSFGKSNANDIYPVVLTSIS 746
N +G AF NA + FG +N IYP +T +S
Sbjct: 479 NAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVS 515
>At4g11530.1 68417.m01850 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 931
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +3
Query: 138 ILNQWFQQCAGIVLTNYHYLSTATCFHGEF-----YDPAYRRIIA 257
+LN F L + Y+ST TCF+G F YD RRI++
Sbjct: 2 MLNTLFLPIFLFFLITFDYVSTQTCFNGYFKPNGTYDLNRRRILS 46
>At3g29185.1 68416.m03658 expressed protein
Length = 433
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 644 LGCPCLLSKCASRHRIFWKEQCQ*HLPRS 730
+GCPC +SKC + + F E C P S
Sbjct: 380 MGCPCDVSKCVADLKSFHLEFCWLESPSS 408
>At1g49740.1 68414.m05578 expressed protein similar to MAP3K-like
protein kinase GB:CAB16796 GI:4006878 from [Arabidopsis
thaliana]
Length = 359
Score = 27.9 bits (59), Expect = 8.7
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Frame = -3
Query: 530 HNEF-ELVEVAVRYTAAL----NGSSPSEQINKNTLGYYDTLLDNSTLLDVWA--EVDGM 372
HN F L EV+ +A L S + Q+N G+ + D D+W DG
Sbjct: 84 HNSFARLGEVSRTGSAILAPTNQQDSITSQLNNGVRGFMLDMYDFQN--DIWLCHSFDGT 141
Query: 371 CYSYDAHILVVILLREF 321
C+++ A + +LREF
Sbjct: 142 CFNFTAFQPAINILREF 158
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,475,290
Number of Sequences: 28952
Number of extensions: 426651
Number of successful extensions: 1076
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1892353600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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