Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30475
(737 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 27 0.12
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 0.64
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.64
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 0.64
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.64
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 21 7.9
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 7.9
AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory recept... 21 7.9
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 27.5 bits (58), Expect = 0.12
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 7/77 (9%)
Frame = +1
Query: 235 RFISQENSDSEMWLDFNGQPLKWHYPIGFLYDLYCGNDPQ----LPWTLTVHFTKFPEDI 402
RFI E W +F+G L W YP + D G D W + P+
Sbjct: 1498 RFIKHVLQFLEKW-NFDGLDLDWEYPKCWQVDCKKGPDSDKQAFAAWVTELKQAFKPKGY 1556
Query: 403 LLHC---PNKDVVEAHY 444
LL P+K V++A Y
Sbjct: 1557 LLSAAVSPSKTVIDAGY 1573
Score = 23.4 bits (48), Expect = 1.9
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +1
Query: 193 YFPLVIDKMKRHFLRFISQENSDSEMWLDFNGQPLKWHYPIGFLYDLYCGND 348
Y LV D R FI+ + E W +F+G L W YP + D G D
Sbjct: 2409 YSRLVNDPQAR--AAFIAHVLAFIEEW-NFDGLDLDWEYPKCWQVDCNKGPD 2457
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.64
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 539 YKMTSLISFGLSTDVLWSHMVIMMDSNTYH-LGFILMMVYTINALSVLK 682
++ + + F S +SH +I+ + T H +G L++ Y + L V+K
Sbjct: 148 FRSSRMCFFKSSKKPAFSHFLIVFFTETLHTVGIALLIFYILPDLDVVK 196
Score = 21.8 bits (44), Expect = 5.9
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 415 PNKDVVEAHYMSTVKEADVLKHRGQVMSTMQKKDHNQLW 531
P KDV E +++ E D HR + Q+ +N W
Sbjct: 1515 PAKDVFENGHVNKAFEEDNYDHRRNSLQMQQR--NNVTW 1551
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.64
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 539 YKMTSLISFGLSTDVLWSHMVIMMDSNTYH-LGFILMMVYTINALSVLK 682
++ + + F S +SH +I+ + T H +G L++ Y + L V+K
Sbjct: 148 FRSSRMCFFKSSKKPAFSHFLIVFFTETLHTVGIALLIFYILPDLDVVK 196
Score = 21.8 bits (44), Expect = 5.9
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 415 PNKDVVEAHYMSTVKEADVLKHRGQVMSTMQKKDHNQLW 531
P KDV E +++ E D HR + Q+ +N W
Sbjct: 1515 PAKDVFENGHVNKAFEEDNYDHRRNSLQMQQR--NNVTW 1551
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.64
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 539 YKMTSLISFGLSTDVLWSHMVIMMDSNTYH-LGFILMMVYTINALSVLK 682
++ + + F S +SH +I+ + T H +G L++ Y + L V+K
Sbjct: 148 FRSSRMCFFKSSKKPAFSHFLIVFFTETLHTVGIALLIFYILPDLDVVK 196
Score = 21.8 bits (44), Expect = 5.9
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 415 PNKDVVEAHYMSTVKEADVLKHRGQVMSTMQKKDHNQLW 531
P KDV E +++ E D HR + Q+ +N W
Sbjct: 1515 PAKDVFENGHVNKAFEEDNYDHRRNSLQMQQR--NNVTW 1551
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.64
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 539 YKMTSLISFGLSTDVLWSHMVIMMDSNTYH-LGFILMMVYTINALSVLK 682
++ + + F S +SH +I+ + T H +G L++ Y + L V+K
Sbjct: 148 FRSSRMCFFKSSKKPAFSHFLIVFFTETLHTVGIALLIFYILPDLDVVK 196
Score = 21.8 bits (44), Expect = 5.9
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 415 PNKDVVEAHYMSTVKEADVLKHRGQVMSTMQKKDHNQLW 531
P KDV E +++ E D HR + Q+ +N W
Sbjct: 1515 PAKDVFENGHVNKAFEEDNYDHRRNSLQMQQR--NNVTW 1551
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +1
Query: 280 FNGQPLKWHYPIG 318
FNG + W YP G
Sbjct: 632 FNGLDVDWEYPRG 644
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 702 FSTIISIFRTDKALIVYTII 643
F+ S FR+ K LI+Y II
Sbjct: 29 FTCTRSNFRSSKLLILYNII 48
>AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory receptor
candidate 3 protein.
Length = 398
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 702 FSTIISIFRTDKALIVYTII 643
F+ S FR+ K LI+Y II
Sbjct: 47 FTCTRSNFRSSKLLILYNII 66
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,516
Number of Sequences: 336
Number of extensions: 4470
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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