Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30475
(737 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24521| Best HMM Match : APG5 (HMM E-Value=3.2e-08) 56 2e-08
SB_670| Best HMM Match : Pepsin-I3 (HMM E-Value=3.7) 31 1.3
SB_5079| Best HMM Match : fn3 (HMM E-Value=1.3e-35) 29 3.0
SB_20527| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2) 29 5.2
SB_4535| Best HMM Match : F5_F8_type_C (HMM E-Value=3.92364e-44) 29 5.2
SB_59163| Best HMM Match : JmjC (HMM E-Value=2.7) 29 5.2
SB_17340| Best HMM Match : 7tm_3 (HMM E-Value=0) 29 5.2
SB_53043| Best HMM Match : JmjC (HMM E-Value=4.1) 28 6.9
SB_52203| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7) 28 6.9
SB_48849| Best HMM Match : Pepsin-I3 (HMM E-Value=1.5) 28 6.9
SB_33517| Best HMM Match : JmjC (HMM E-Value=4.1) 28 6.9
SB_33176| Best HMM Match : JmjC (HMM E-Value=1.8) 28 6.9
SB_29901| Best HMM Match : JmjC (HMM E-Value=2.9) 28 6.9
SB_24022| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_23845| Best HMM Match : IL6 (HMM E-Value=1.2) 28 6.9
SB_20299| Best HMM Match : JmjC (HMM E-Value=4.1) 28 6.9
SB_19741| Best HMM Match : RVT_1 (HMM E-Value=2.2) 28 6.9
SB_18135| Best HMM Match : Cytochrom_B561 (HMM E-Value=0.5) 28 6.9
SB_15424| Best HMM Match : PAN (HMM E-Value=0.00016) 28 6.9
SB_15283| Best HMM Match : JmjC (HMM E-Value=4.1) 28 6.9
SB_8184| Best HMM Match : Pepsin-I3 (HMM E-Value=2.4) 28 6.9
SB_1913| Best HMM Match : Arf (HMM E-Value=0.015) 28 6.9
SB_847| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_57132| Best HMM Match : RVT_1 (HMM E-Value=1.4) 28 6.9
SB_57052| Best HMM Match : JmjC (HMM E-Value=4.1) 28 6.9
SB_55138| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_49463| Best HMM Match : RVT_1 (HMM E-Value=2.7) 28 6.9
SB_44652| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_40883| Best HMM Match : RVT_1 (HMM E-Value=1.4) 28 6.9
SB_25248| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_23439| Best HMM Match : Pyr_redox_2 (HMM E-Value=0.00066) 28 6.9
SB_23192| Best HMM Match : JmjC (HMM E-Value=4.1) 28 6.9
SB_15660| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_7666| Best HMM Match : Cps15 (HMM E-Value=0.93) 28 6.9
SB_3911| Best HMM Match : Pepsin-I3 (HMM E-Value=3.7) 28 6.9
SB_3833| Best HMM Match : Borrelia_orfA (HMM E-Value=1.2) 28 6.9
SB_2565| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_1357| Best HMM Match : JmjC (HMM E-Value=4.1) 28 6.9
SB_56667| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2) 28 9.1
SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_24622| Best HMM Match : F5_F8_type_C (HMM E-Value=7.4e-17) 28 9.1
>SB_24521| Best HMM Match : APG5 (HMM E-Value=3.2e-08)
Length = 114
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1
Query: 550 KFDQFWAINRRLMESHGDNDGFKHIPLRIYTDDGVYNQRLVCPKNTDNSRKTLQ 711
KF+QFWA+NRRLME GD+ FK+IP +IY D + Q L P + ++TL+
Sbjct: 2 KFEQFWAVNRRLMERVGDDPYFKYIPFKIYQVDKPFIQWLFRPVSDTGEQQTLR 55
>SB_670| Best HMM Match : Pepsin-I3 (HMM E-Value=3.7)
Length = 224
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT N+RKT +++++
Sbjct: 170 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVNNRKTRKRNNI 222
>SB_5079| Best HMM Match : fn3 (HMM E-Value=1.3e-35)
Length = 978
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKH--IPLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F +P + DD YN L NT +RKT +++++
Sbjct: 832 INRRLSALSSDQASFDQTALPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 884
>SB_20527| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2)
Length = 671
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDLRAIS 735
INRRL D F P + DD YN L NT +RKT +++++ S
Sbjct: 437 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNILCYS 493
>SB_4535| Best HMM Match : F5_F8_type_C (HMM E-Value=3.92364e-44)
Length = 972
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 527 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTCKRNNI 579
>SB_59163| Best HMM Match : JmjC (HMM E-Value=2.7)
Length = 237
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 118 INRRLSALSSDQGSFDQTAPPYQKALDDSGYNYTLRYDPNTVTNRKTRKRNNI 170
>SB_17340| Best HMM Match : 7tm_3 (HMM E-Value=0)
Length = 890
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 229 FLRFISQENSDSEMWLDFNGQPLKWHYPIGFLYDLYCGN 345
+LR +S E S + LD NG P Y IG+ +D N
Sbjct: 567 YLRHVSFEGSTGHVTLDENGDPKHAFYDIGY-FDFRLSN 604
>SB_53043| Best HMM Match : JmjC (HMM E-Value=4.1)
Length = 236
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 118 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 170
>SB_52203| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7)
Length = 611
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 334 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYKPNTVTNRKTRKRNNI 386
>SB_48849| Best HMM Match : Pepsin-I3 (HMM E-Value=1.5)
Length = 242
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 156 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 208
>SB_33517| Best HMM Match : JmjC (HMM E-Value=4.1)
Length = 237
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 118 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 170
>SB_33176| Best HMM Match : JmjC (HMM E-Value=1.8)
Length = 460
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 183 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYDPNTVTNRKTRKRNNI 235
>SB_29901| Best HMM Match : JmjC (HMM E-Value=2.9)
Length = 279
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 118 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYDPNTVTNRKTRKRNNI 170
>SB_24022| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 28.3 bits (60), Expect = 6.9
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +1
Query: 487 QVMSTMQKKDHNQLWLGLQN 546
+V+ T+ +K H +LW GL+N
Sbjct: 46 EVLQTLSRKQHEKLWEGLKN 65
>SB_23845| Best HMM Match : IL6 (HMM E-Value=1.2)
Length = 1388
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 796 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 848
>SB_20299| Best HMM Match : JmjC (HMM E-Value=4.1)
Length = 347
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 93 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 145
>SB_19741| Best HMM Match : RVT_1 (HMM E-Value=2.2)
Length = 593
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 316 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 368
>SB_18135| Best HMM Match : Cytochrom_B561 (HMM E-Value=0.5)
Length = 1595
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 405 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 457
>SB_15424| Best HMM Match : PAN (HMM E-Value=0.00016)
Length = 702
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 198 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYDPNTVTNRKTRKRNNI 250
>SB_15283| Best HMM Match : JmjC (HMM E-Value=4.1)
Length = 276
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 42 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 94
>SB_8184| Best HMM Match : Pepsin-I3 (HMM E-Value=2.4)
Length = 447
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 170 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 222
>SB_1913| Best HMM Match : Arf (HMM E-Value=0.015)
Length = 777
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 500 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 552
>SB_847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1058
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 605 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 657
>SB_57132| Best HMM Match : RVT_1 (HMM E-Value=1.4)
Length = 523
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 469 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYDPNTVTNRKTRKRNNI 521
>SB_57052| Best HMM Match : JmjC (HMM E-Value=4.1)
Length = 291
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 118 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 170
>SB_55138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 111 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYDPNTVTNRKTRKRNNI 163
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 1492 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 1544
>SB_49463| Best HMM Match : RVT_1 (HMM E-Value=2.7)
Length = 290
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 215 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 267
>SB_44652| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 34 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 86
>SB_40883| Best HMM Match : RVT_1 (HMM E-Value=1.4)
Length = 317
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 263 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYDPNTVTNRKTRKRNNI 315
>SB_25248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 521
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 244 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYDPNTVTNRKTRKRNNI 296
>SB_23439| Best HMM Match : Pyr_redox_2 (HMM E-Value=0.00066)
Length = 417
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 204 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 256
>SB_23192| Best HMM Match : JmjC (HMM E-Value=4.1)
Length = 319
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 42 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 94
>SB_15660| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 30 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 82
>SB_7666| Best HMM Match : Cps15 (HMM E-Value=0.93)
Length = 1062
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 785 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 837
>SB_3911| Best HMM Match : Pepsin-I3 (HMM E-Value=3.7)
Length = 393
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 215 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 267
>SB_3833| Best HMM Match : Borrelia_orfA (HMM E-Value=1.2)
Length = 594
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 118 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 170
>SB_2565| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 44 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYDPNTVTNRKTRKRNNI 96
>SB_1357| Best HMM Match : JmjC (HMM E-Value=4.1)
Length = 143
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 57 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNI 109
>SB_56667| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2)
Length = 628
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 351 INRRLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNRKTRKRNNV 403
>SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 571 INRRLMESHGDNDGFKHI--PLRIYTDDGVYNQRLVCPKNTDNSRKTLQQDDL 723
INRRL D F P + DD YN L NT +RKT +++++
Sbjct: 1172 INRRLSALSSDQASFDQTAPPYQKPLDDSGYNYTLRYEPNTVTNRKTRKRNNI 1224
>SB_24622| Best HMM Match : F5_F8_type_C (HMM E-Value=7.4e-17)
Length = 897
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +1
Query: 289 QPLKWHYPIGFLYDLYCGNDPQLPWTLTVHFTKFP 393
QP WH IG +LY G P +T V KFP
Sbjct: 273 QPQAWHGNIGLRVELY-GCKPGFRFTARVLLLKFP 306
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,996,282
Number of Sequences: 59808
Number of extensions: 514913
Number of successful extensions: 1251
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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