Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30465
(671 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical pr... 51 9e-07
Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical p... 51 9e-07
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 32 0.32
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 32 0.32
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z99709-5|CAB16860.1| 246|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 3.0
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 3.0
AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin syntha... 29 4.0
AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin syntha... 29 4.0
AL034488-8|CAE46690.1| 395|Caenorhabditis elegans Hypothetical ... 28 6.9
AL034488-7|CAA22452.1| 396|Caenorhabditis elegans Hypothetical ... 28 6.9
>Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 50.8 bits (116), Expect = 9e-07
Identities = 22/83 (26%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 349 EKGSNSEKA-DFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLT 525
++ +SEK + A+E G+GRF L + G+ ++ M+++ +S I P+ C+ ++
Sbjct: 58 QRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGIS 117
Query: 526 TQTKGWLNSIIFIGMMVGAYAWG 594
+ + + + +F GMM+ + WG
Sbjct: 118 SVQQALVTTCVFSGMMLSSTFWG 140
>Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 50.8 bits (116), Expect = 9e-07
Identities = 22/83 (26%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 349 EKGSNSEKA-DFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLT 525
++ +SEK + A+E G+GRF L + G+ ++ M+++ +S I P+ C+ ++
Sbjct: 58 QRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGIS 117
Query: 526 TQTKGWLNSIIFIGMMVGAYAWG 594
+ + + + +F GMM+ + WG
Sbjct: 118 SVQQALVTTCVFSGMMLSSTFWG 140
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 32.3 bits (70), Expect = 0.32
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -1
Query: 410 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 231
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 118 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 174
Query: 230 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 132
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 175 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 207
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 32.3 bits (70), Expect = 0.32
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -1
Query: 410 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 231
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 325 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 381
Query: 230 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 132
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 382 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 414
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 32.3 bits (70), Expect = 0.32
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -1
Query: 410 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 231
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 325 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 381
Query: 230 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 132
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 382 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 414
>Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical
protein F09A5.1 protein.
Length = 483
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/64 (20%), Positives = 31/64 (48%)
Frame = +1
Query: 412 RFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWLNSIIFIGMMVGAYAW 591
R Y+ + + +V+ +D +++ +LP Q ++ G + ++ I M+G+
Sbjct: 5 RKDYISIVILFVVNLINNVDRYTIAGVLPDVQSYYNINDSMGGMIQTVFLISFMIGSPIC 64
Query: 592 GFSG 603
G+ G
Sbjct: 65 GYLG 68
>Z99709-5|CAB16860.1| 246|Caenorhabditis elegans Hypothetical
protein C47B2.5 protein.
Length = 246
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +1
Query: 385 RAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWL 546
R EL G G +A CGL STS E+ V+ F L ++ Q + L
Sbjct: 188 RGSELIGAGMVVNDWVAFCGLDSTSTELSVVESIFKLGEQGAPTSISNQLRDTL 241
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 13 STTSVKFTSPHPHRS*PPEVAERSQTTRKKHIGSSPASY 129
+T +K T+ HPHR PP ++ T+ +H G +S+
Sbjct: 688 NTRHLKRTTEHPHRKQPP---QKRDNTKDQHRGGKKSSH 723
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 13 STTSVKFTSPHPHRS*PPEVAERSQTTRKKHIGSSPASY 129
+T +K T+ HPHR PP ++ T+ +H G +S+
Sbjct: 910 NTRHLKRTTEHPHRKQPP---QKRDNTKDQHRGGKKSSH 945
>AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin synthase 2
protein.
Length = 1668
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = -3
Query: 246 RILGPRVSFYHPMRAGGFVWWSRGHSNVSHWGEWRYQQRIAC 121
R LG HP G VW+ + + HW + + I C
Sbjct: 887 RRLGAACGRIHPRGDGAMVWYQKFEYAIGHWLQKATEHMIGC 928
>AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin synthase
protein 2 protein.
Length = 1668
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = -3
Query: 246 RILGPRVSFYHPMRAGGFVWWSRGHSNVSHWGEWRYQQRIAC 121
R LG HP G VW+ + + HW + + I C
Sbjct: 887 RRLGAACGRIHPRGDGAMVWYQKFEYAIGHWLQKATEHMIGC 928
>AL034488-8|CAE46690.1| 395|Caenorhabditis elegans Hypothetical
protein Y54G11A.8b protein.
Length = 395
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 486 VHPTLGTVRLRPHHSD*RMAKQYNLHRYDGGRVRLGVQW 602
V T R HHS R +Q++ H GG+ G +W
Sbjct: 16 VAAAFSTGTTRQHHSSGRSRQQHHRHGGSGGKTNGGGRW 54
>AL034488-7|CAA22452.1| 396|Caenorhabditis elegans Hypothetical
protein Y54G11A.8a protein.
Length = 396
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 486 VHPTLGTVRLRPHHSD*RMAKQYNLHRYDGGRVRLGVQW 602
V T R HHS R +Q++ H GG+ G +W
Sbjct: 16 VAAAFSTGTTRQHHSSGRSRQQHHRHGGSGGKTNGGGRW 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,378,631
Number of Sequences: 27780
Number of extensions: 364917
Number of successful extensions: 986
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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