Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30464
         (478 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   0.96 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   3.9  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   3.9  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   5.1  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   6.8  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   9.0  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.8 bits (49), Expect = 0.96
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 95  DTPFSQLKLNEIGSWF 142
           ++P  QL LNEI +WF
Sbjct: 519 ESPDKQLTLNEIYNWF 534


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 416 Q*ISTVKKGGARYPIRP 466
           Q I T+ +  +RYP+RP
Sbjct: 111 QDIETIIRRNSRYPLRP 127


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = +1

Query: 265 WQHGLLLCHQLWKN*APQELQIPLKN 342
           W   + +    WKN  P  L   LKN
Sbjct: 59  WNDKVFITIPRWKNGVPSNLNFFLKN 84


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -2

Query: 465 GRIGYRAPPFFTV 427
           GR+GYRA  ++TV
Sbjct: 132 GRMGYRALLYYTV 144


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 15  WLSVITPRSIILLYMGLTILH 77
           WLS I    +ILL  G  ++H
Sbjct: 51  WLSFIRIVLVILLRAGYVLIH 71


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 162 RLPWPELSVEPGGD 203
           RLPW EL  +P  D
Sbjct: 342 RLPWLELQEKPISD 355


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,187
Number of Sequences: 438
Number of extensions: 2858
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)